Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is ydiE [C]

Identifier: 238919806

GI number: 238919806

Start: 1839711

End: 1839941

Strand: Reverse

Name: ydiE [C]

Synonym: NT01EI_1910

Alternate gene names: 238919806

Gene position: 1839941-1839711 (Counterclockwise)

Preceding gene: 238919807

Following gene: 238919805

Centisome position: 48.26

GC content: 51.95

Gene sequence:

>231_bases
ATGATTATCATTAAGATGAAGAGCGGAATTTTATCCTGCGTAATGACTATGGAAAAAGCGACTCCCGATTCACCACGTAC
CAAGCTGACGCAAGAACGTACTTCAGCGCCGGGCAGTACCATCGCCAGTCACACCCTGCTCGGCCAGGCAGGCCGGGTCA
CCATTACCCATAAGGGAGAGTACTACCAGCTACGTCAGACCCGGGCGGGTAAACTTATCCTGACCAAATAG

Upstream 100 bases:

>100_bases
CTCTGGGGGCAGATCCACACGCTGATAGACCGCCATCTGACGCTGCCAGAATACCCCATATGTTAAAAACTGCTTGCCGT
CATCGGCAGCTTATACGATA

Downstream 100 bases:

>100_bases
ATCCCATAACACCCTGATATTGTTTCGCCAGCCACCCAGTCCTCCGCATACCCGCGGTGTGGCAAGGCAGCCAGCAGTCC
CAATGCCATATTACATTTGG

Product: hemin uptake protein HemP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MIIIKMKSGILSCVMTMEKATPDSPRTKLTQERTSAPGSTIASHTLLGQAGRVTITHKGEYYQLRQTRAGKLILTK

Sequences:

>Translated_76_residues
MIIIKMKSGILSCVMTMEKATPDSPRTKLTQERTSAPGSTIASHTLLGQAGRVTITHKGEYYQLRQTRAGKLILTK
>Mature_76_residues
MIIIKMKSGILSCVMTMEKATPDSPRTKLTQERTSAPGSTIASHTLLGQAGRVTITHKGEYYQLRQTRAGKLILTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8346; Mature: 8346

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIIKMKSGILSCVMTMEKATPDSPRTKLTQERTSAPGSTIASHTLLGQAGRVTITHKGE
CEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCEEEEEECCC
YYQLRQTRAGKLILTK
EEEEECCCCCEEEEEC
>Mature Secondary Structure
MIIIKMKSGILSCVMTMEKATPDSPRTKLTQERTSAPGSTIASHTLLGQAGRVTITHKGE
CEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCEEEEEECCC
YYQLRQTRAGKLILTK
EEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA