| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919807
Identifier: 238919807
GI number: 238919807
Start: 1839976
End: 1840608
Strand: Reverse
Name: 238919807
Synonym: NT01EI_1911
Alternate gene names: NA
Gene position: 1840608-1839976 (Counterclockwise)
Preceding gene: 238919808
Following gene: 238919806
Centisome position: 48.28
GC content: 67.14
Gene sequence:
>633_bases ATGACACCGTGGATCCTGTTTGGCGCCGGACAGGGCGCCGGCCTGGCGTTGGCACAACAGGCGGCGGGCCATCACCCGCT GTATGCCCTGGTGCGTAAGGAGGCTCAGGCCCAACGCCTGCGCGATCTCGGCGTTCAGGTCACGCTGGGCGATGCCTGCG ATATACAGACGCTGGGGGCGCTATACCGCCAGGCTGGCCCACACAGCGCGATCCTCTCCACCCTGGGCGGCGGCGGCCAT GACTACCTCGCCCACCGGGCAATTATCGATTGCGCCGTCGAACAGGGGATCGCCCGGATGCTGTTAGTGACATCGCTGGG CTGCGGGGAGAGCTGGCCACTGCTGTCGCCGCGCGCCCGCGCCGCCTTCGGCCACGCGGTGCGGGAAAAGAGCCTGGCGG AGTGCTGGCTGCAGAGCAGCGGTATGGACTTTTGCATTCTGCGTCCCGGCGGGCTGCTGGATGGCGAGGCCAGCGGGCAG GCCACGTTGTACCGGACGCCGCGCCACGGTCTGGTGCGCCGCGCCGATCTGGCGCAGTGGATGTACCGCCTGATGGCTAT GCCACAGCTCTGGGGGCAGATCCACACGCTGATAGACCGCCATCTGACGCTGCCAGAATACCCCATATGTTAA
Upstream 100 bases:
>100_bases AAGTATTCGTTGGCCGGGACGAAAAGCGGCGCCTGCGGACAGAACCGCTGATGGCTTTCCGCACCCTGGCGCAGACGCTG GCAACCACGGAGGAGTACAG
Downstream 100 bases:
>100_bases AAACTGCTTGCCGTCATCGGCAGCTTATACGATAATGATTATCATTAAGATGAAGAGCGGAATTTTATCCTGCGTAATGA CTATGGAAAAAGCGACTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTPWILFGAGQGAGLALAQQAAGHHPLYALVRKEAQAQRLRDLGVQVTLGDACDIQTLGALYRQAGPHSAILSTLGGGGH DYLAHRAIIDCAVEQGIARMLLVTSLGCGESWPLLSPRARAAFGHAVREKSLAECWLQSSGMDFCILRPGGLLDGEASGQ ATLYRTPRHGLVRRADLAQWMYRLMAMPQLWGQIHTLIDRHLTLPEYPIC
Sequences:
>Translated_210_residues MTPWILFGAGQGAGLALAQQAAGHHPLYALVRKEAQAQRLRDLGVQVTLGDACDIQTLGALYRQAGPHSAILSTLGGGGH DYLAHRAIIDCAVEQGIARMLLVTSLGCGESWPLLSPRARAAFGHAVREKSLAECWLQSSGMDFCILRPGGLLDGEASGQ ATLYRTPRHGLVRRADLAQWMYRLMAMPQLWGQIHTLIDRHLTLPEYPIC >Mature_209_residues TPWILFGAGQGAGLALAQQAAGHHPLYALVRKEAQAQRLRDLGVQVTLGDACDIQTLGALYRQAGPHSAILSTLGGGGHD YLAHRAIIDCAVEQGIARMLLVTSLGCGESWPLLSPRARAAFGHAVREKSLAECWLQSSGMDFCILRPGGLLDGEASGQA TLYRTPRHGLVRRADLAQWMYRLMAMPQLWGQIHTLIDRHLTLPEYPIC
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22786; Mature: 22655
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPWILFGAGQGAGLALAQQAAGHHPLYALVRKEAQAQRLRDLGVQVTLGDACDIQTLGA CCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH LYRQAGPHSAILSTLGGGGHDYLAHRAIIDCAVEQGIARMLLVTSLGCGESWPLLSPRAR HHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH AAFGHAVREKSLAECWLQSSGMDFCILRPGGLLDGEASGQATLYRTPRHGLVRRADLAQW HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH MYRLMAMPQLWGQIHTLIDRHLTLPEYPIC HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TPWILFGAGQGAGLALAQQAAGHHPLYALVRKEAQAQRLRDLGVQVTLGDACDIQTLGA CCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH LYRQAGPHSAILSTLGGGGHDYLAHRAIIDCAVEQGIARMLLVTSLGCGESWPLLSPRAR HHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH AAFGHAVREKSLAECWLQSSGMDFCILRPGGLLDGEASGQATLYRTPRHGLVRRADLAQW HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH MYRLMAMPQLWGQIHTLIDRHLTLPEYPIC HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA