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The map label for this gene is hmuS [H]

Identifier: 238919804

GI number: 238919804

Start: 1836498

End: 1837535

Strand: Reverse

Name: hmuS [H]

Synonym: NT01EI_1908

Alternate gene names: 238919804

Gene position: 1837535-1836498 (Counterclockwise)

Preceding gene: 238919805

Following gene: 238919803

Centisome position: 48.2

GC content: 65.41

Gene sequence:

>1038_bases
ATGAGCCATGACCTGTATACCCGCTACATGAACGCCAGCCAGCAGCACCCACGCGCCTCTGCCCGCGATCTGGCGCAGAT
TTTGGGCGTCAGCGAGGGCGAGTTGACCCGGGCCCGCGTCGGCCACGACGCCGTCCGCCTGCACGCTGACGCCGCGGCCC
TGCTGACGGCCTGCGCCGCGCTGGGCGAGGTTAACGCCATCACCCGCAACGGGTATGCCGTACATGAGCAGCTGGGGCGC
TATGACAACGCGCACCTGAGCGGCCACAGCGGGCTGATCCTCAACCCACGGGCGCTGGATCTGCGCCTGTTTTTACAGCA
CTGGCACGCCGCCTTTGCCCTGCGTGAGCACAGTGCGCGCGGCGAGCGCTTTAGCCTGCAGTGCTTTGACCCGCAGGGTG
ATGCCGTACATAAAATCTATGCCACGCAGGAGAGCGATATGGCAGCCTGGCACGCGCTGGTTTCCCGCTTCACCGGTGAC
GGCAATCCGGCCTTCCCCGTGCTCTCCGCGCCCCCCTCTGCCGCCGCACCGGCGCTGGACGCAACCGCGCTGGAGCGCGA
ATGGCGCGCCATGACCGATGTACACCAGTTTTTTCCGCTGCTACAACGCCATGGCGTCAGCCGGCAGCAGGCCTTTGCCG
CCGTCGCCGATGATCTGGCCTGCCGGGTGGGTAACGCCGCGCTGCAGCAGATCCTGACCCAGGCGCAGCGGTGTCAGAAT
GAGATCATGATCTTCGTCGGTAACCGTGGCTGCGTACAGATCTTCACCGGTGAAATCGCCAGGCTGACCCCGCAGGATCA
ATGGCTCAACGTCTTTAATCCGCGCTTTACCCTGCACCTGTCCGCCCCGGCCATCGCGGAGAGCTGGATCACCCGTAAAC
CGACCCGCGATGGCATGGTCAGCAGCCTGGAACTGTTCGCCGCCGACGGTACCCAGATAGCCCAGCTGTTCGGGCAGCGT
ACCGAAGGCGAGACGGAACAGACACAGTGGCGCGAGCAGCTGGCGGCCGTGACATCGCTGACGCAGGAGCCGGCATAA

Upstream 100 bases:

>100_bases
CGGCGCCCGTCTGCTGCTCAGCTACCAGTGGTAGCGCGATTTTCACCCCGGGGCGCTAGCGCGCCCCGTTTTCACCTGCA
CCATAAAAAAGGATCTTTGC

Downstream 100 bases:

>100_bases
TGGCTCGAATCACTCTGGCGATACTGCTGGCAGTGTGCAGCATCGGCGCCCGGGGCGGTGAACGGCTGATCACCATCGGC
GGTGACGTGACGGAGATCGT

Product: hemin degrading family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MSHDLYTRYMNASQQHPRASARDLAQILGVSEGELTRARVGHDAVRLHADAAALLTACAALGEVNAITRNGYAVHEQLGR
YDNAHLSGHSGLILNPRALDLRLFLQHWHAAFALREHSARGERFSLQCFDPQGDAVHKIYATQESDMAAWHALVSRFTGD
GNPAFPVLSAPPSAAAPALDATALEREWRAMTDVHQFFPLLQRHGVSRQQAFAAVADDLACRVGNAALQQILTQAQRCQN
EIMIFVGNRGCVQIFTGEIARLTPQDQWLNVFNPRFTLHLSAPAIAESWITRKPTRDGMVSSLELFAADGTQIAQLFGQR
TEGETEQTQWREQLAAVTSLTQEPA

Sequences:

>Translated_345_residues
MSHDLYTRYMNASQQHPRASARDLAQILGVSEGELTRARVGHDAVRLHADAAALLTACAALGEVNAITRNGYAVHEQLGR
YDNAHLSGHSGLILNPRALDLRLFLQHWHAAFALREHSARGERFSLQCFDPQGDAVHKIYATQESDMAAWHALVSRFTGD
GNPAFPVLSAPPSAAAPALDATALEREWRAMTDVHQFFPLLQRHGVSRQQAFAAVADDLACRVGNAALQQILTQAQRCQN
EIMIFVGNRGCVQIFTGEIARLTPQDQWLNVFNPRFTLHLSAPAIAESWITRKPTRDGMVSSLELFAADGTQIAQLFGQR
TEGETEQTQWREQLAAVTSLTQEPA
>Mature_344_residues
SHDLYTRYMNASQQHPRASARDLAQILGVSEGELTRARVGHDAVRLHADAAALLTACAALGEVNAITRNGYAVHEQLGRY
DNAHLSGHSGLILNPRALDLRLFLQHWHAAFALREHSARGERFSLQCFDPQGDAVHKIYATQESDMAAWHALVSRFTGDG
NPAFPVLSAPPSAAAPALDATALEREWRAMTDVHQFFPLLQRHGVSRQQAFAAVADDLACRVGNAALQQILTQAQRCQNE
IMIFVGNRGCVQIFTGEIARLTPQDQWLNVFNPRFTLHLSAPAIAESWITRKPTRDGMVSSLELFAADGTQIAQLFGQRT
EGETEQTQWREQLAAVTSLTQEPA

Specific function: Part of the binding-protein-dependent transport system for hemin [H]

COG id: COG3720

COG function: function code P; Putative heme degradation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To Y.enterocolitica hemS [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007845 [H]

Pfam domain/function: PF05171 HemS [H]

EC number: NA

Molecular weight: Translated: 38019; Mature: 37888

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHDLYTRYMNASQQHPRASARDLAQILGVSEGELTRARVGHDAVRLHADAAALLTACAA
CCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHEEHHHHHHHHHHHHH
LGEVNAITRNGYAVHEQLGRYDNAHLSGHSGLILNPRALDLRLFLQHWHAAFALREHSAR
HHCCHHHHCCCCHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCC
GERFSLQCFDPQGDAVHKIYATQESDMAAWHALVSRFTGDGNPAFPVLSAPPSAAAPALD
CCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHH
ATALEREWRAMTDVHQFFPLLQRHGVSRQQAFAAVADDLACRVGNAALQQILTQAQRCQN
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EIMIFVGNRGCVQIFTGEIARLTPQDQWLNVFNPRFTLHLSAPAIAESWITRKPTRDGMV
CEEEEECCCCEEEEECCCHHCCCCCHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCCCHH
SSLELFAADGTQIAQLFGQRTEGETEQTQWREQLAAVTSLTQEPA
HHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SHDLYTRYMNASQQHPRASARDLAQILGVSEGELTRARVGHDAVRLHADAAALLTACAA
CCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHEEHHHHHHHHHHHHH
LGEVNAITRNGYAVHEQLGRYDNAHLSGHSGLILNPRALDLRLFLQHWHAAFALREHSAR
HHCCHHHHCCCCHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCC
GERFSLQCFDPQGDAVHKIYATQESDMAAWHALVSRFTGDGNPAFPVLSAPPSAAAPALD
CCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHH
ATALEREWRAMTDVHQFFPLLQRHGVSRQQAFAAVADDLACRVGNAALQQILTQAQRCQN
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EIMIFVGNRGCVQIFTGEIARLTPQDQWLNVFNPRFTLHLSAPAIAESWITRKPTRDGMV
CEEEEECCCCEEEEECCCHHCCCCCHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCCCHH
SSLELFAADGTQIAQLFGQRTEGETEQTQWREQLAAVTSLTQEPA
HHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9026634; 11586360; 12142430 [H]