| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is pabB [H]
Identifier: 238919756
GI number: 238919756
Start: 1795831
End: 1797219
Strand: Reverse
Name: pabB [H]
Synonym: NT01EI_1860
Alternate gene names: 238919756
Gene position: 1797219-1795831 (Counterclockwise)
Preceding gene: 238919758
Following gene: 238919755
Centisome position: 47.14
GC content: 65.37
Gene sequence:
>1389_bases ATGACCGCTATCCCCGAACTGACACAGCGTGACCTTCCCTACCGGCCCGATGCGGCGCTGCGCTACTTTACCCCGCTGGC GCATCATCCCTGGGCCATGCTGCTCAGCTCCGCCGCCGCCGACCACGCCCATAACCGCTATGATATTGTCGTAGCCGACC CCTGCGCCACGCTGCAGACCCGCGGCGAACAGACGCAGATCGCCACGCGGGATGGTGCCTGCCGTGACGACGGTGGCGAT CCGCTGACCCTATTGCGCACAGAGATTGATCGCTATCTTCCCCGCTGCCCACCGCAGCCGGATCTGCCGTTTTGCGGGGG GGCTCTCGGGCTGTGGGGCTACGATCTCGGGCGACGATTCGAACATCTGCCCAGCCAGGCCCACGCCGATCTGCAGGCCC CGGACATGGCGCAGGGGATCTACGACTGGGCGCTGATCGTCGATCATCAGCGGCGTAGGGTGACGCTGCTCAGCTGGCAG GACGCTGGGAAACGCCTGGCCTGGCTGCTGGCGCAGACGCCCGTCCCCGCCGCCCCCTTCAGCCTGACGTCTGCGTGGCA GGCTAACCTGAGCCGACACGCGTACCGCCAAGCCTTCCAGCGGATACAGGCCCACTTACAGGCCGGCGACTGCTACCAAA TCAACCTGACCCAGCGCTTCAGCGCCGACTACCGCGGCGATGAGTGGCAGGCCTTCCTGCGGCTGACCCAGGCCAACCGG GCACCGTTTTCCGCCTTCCTGCGTCTACCGCACAGCGCCGTGATCAGCGTCTCACCGGAGCGTTTCCTGCAGCTCAGCCA AGGCGATATCGTGACCCGCCCGATCAAAGGTACCCTGCCCCGATGCCCGATGCCCCATGACGATGCCCTGCAGCGCCTGC GTCTGGCTGCCTCAGCCAAAGATCGCGCAGAGAACCTGATGATTGTCGATCTGATGCGCAACGACGTTGGCCGGATCGCC GCGCCGGGCAGCGTCAGCGTACCCGAGCTGTTCGCGGTGGAAACCTTCCCCGCCGTTCACCATCTGGTCAGCACCGTCTG CGCCCGTCTGGCCGAAGGGCTGGATGCCTGCGATCTGCTGCGCGCCTGCTTTCCGGGCGGATCGATTACCGGGGCACCCA AGATCCGCGCCATGGAGATCATCGATACGCTGGAGCCACAACGGCGTAACCTTTACTGCGGATCCATTGGCTATATCAGT GCCTGCGGCAATATGGACACCAGCATCACGATCCGTACCCTGCTGGCGGAGCATGGACGCCTGCACTGCTGGGCGGGCGG CGGCATCGTCGCCGACAGCGAGGCAGAGGCCGAATATCAGGAGACGCTGGACAAAGTCAGCCGGATCCTGCCGCTGCTGG CGGACGGAACACCTCTGCTATGCGACTGA
Upstream 100 bases:
>100_bases ACCCGACGAACGGAACAGCACCGTGGTGATTGCCGCACAGGCGCCATCCGTAGATAATTGACCTAAATCATACACAGACC GATGAGACTCCCGCGCCGCC
Downstream 100 bases:
>100_bases GCCCAGCGTTGGCCCGCTTTGTAACCGATTTTCAGCTGAATAGCCCGCTGCCGGAGCGCCCGACGCGCCACACGCGCCAG GCGGCGGTGCTGATCCCCAT
Product: para-aminobenzoate synthase, component I
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MTAIPELTQRDLPYRPDAALRYFTPLAHHPWAMLLSSAAADHAHNRYDIVVADPCATLQTRGEQTQIATRDGACRDDGGD PLTLLRTEIDRYLPRCPPQPDLPFCGGALGLWGYDLGRRFEHLPSQAHADLQAPDMAQGIYDWALIVDHQRRRVTLLSWQ DAGKRLAWLLAQTPVPAAPFSLTSAWQANLSRHAYRQAFQRIQAHLQAGDCYQINLTQRFSADYRGDEWQAFLRLTQANR APFSAFLRLPHSAVISVSPERFLQLSQGDIVTRPIKGTLPRCPMPHDDALQRLRLAASAKDRAENLMIVDLMRNDVGRIA APGSVSVPELFAVETFPAVHHLVSTVCARLAEGLDACDLLRACFPGGSITGAPKIRAMEIIDTLEPQRRNLYCGSIGYIS ACGNMDTSITIRTLLAEHGRLHCWAGGGIVADSEAEAEYQETLDKVSRILPLLADGTPLLCD
Sequences:
>Translated_462_residues MTAIPELTQRDLPYRPDAALRYFTPLAHHPWAMLLSSAAADHAHNRYDIVVADPCATLQTRGEQTQIATRDGACRDDGGD PLTLLRTEIDRYLPRCPPQPDLPFCGGALGLWGYDLGRRFEHLPSQAHADLQAPDMAQGIYDWALIVDHQRRRVTLLSWQ DAGKRLAWLLAQTPVPAAPFSLTSAWQANLSRHAYRQAFQRIQAHLQAGDCYQINLTQRFSADYRGDEWQAFLRLTQANR APFSAFLRLPHSAVISVSPERFLQLSQGDIVTRPIKGTLPRCPMPHDDALQRLRLAASAKDRAENLMIVDLMRNDVGRIA APGSVSVPELFAVETFPAVHHLVSTVCARLAEGLDACDLLRACFPGGSITGAPKIRAMEIIDTLEPQRRNLYCGSIGYIS ACGNMDTSITIRTLLAEHGRLHCWAGGGIVADSEAEAEYQETLDKVSRILPLLADGTPLLCD >Mature_461_residues TAIPELTQRDLPYRPDAALRYFTPLAHHPWAMLLSSAAADHAHNRYDIVVADPCATLQTRGEQTQIATRDGACRDDGGDP LTLLRTEIDRYLPRCPPQPDLPFCGGALGLWGYDLGRRFEHLPSQAHADLQAPDMAQGIYDWALIVDHQRRRVTLLSWQD AGKRLAWLLAQTPVPAAPFSLTSAWQANLSRHAYRQAFQRIQAHLQAGDCYQINLTQRFSADYRGDEWQAFLRLTQANRA PFSAFLRLPHSAVISVSPERFLQLSQGDIVTRPIKGTLPRCPMPHDDALQRLRLAASAKDRAENLMIVDLMRNDVGRIAA PGSVSVPELFAVETFPAVHHLVSTVCARLAEGLDACDLLRACFPGGSITGAPKIRAMEIIDTLEPQRRNLYCGSIGYISA CGNMDTSITIRTLLAEHGRLHCWAGGGIVADSEAEAEYQETLDKVSRILPLLADGTPLLCD
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=442, Percent_Identity=63.5746606334842, Blast_Score=567, Evalue=1e-163, Organism=Escherichia coli, GI1787518, Length=367, Percent_Identity=33.5149863760218, Blast_Score=175, Evalue=4e-45, Organism=Escherichia coli, GI1786809, Length=205, Percent_Identity=28.780487804878, Blast_Score=72, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6320935, Length=439, Percent_Identity=30.5239179954442, Blast_Score=196, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6324361, Length=395, Percent_Identity=26.8354430379747, Blast_Score=137, Evalue=5e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 51079; Mature: 50948
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIPELTQRDLPYRPDAALRYFTPLAHHPWAMLLSSAAADHAHNRYDIVVADPCATLQT CCCCCCHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHC RGEQTQIATRDGACRDDGGDPLTLLRTEIDRYLPRCPPQPDLPFCGGALGLWGYDLGRRF CCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH EHLPSQAHADLQAPDMAQGIYDWALIVDHQRRRVTLLSWQDAGKRLAWLLAQTPVPAAPF HHCCCHHCCCCCCCHHHHHHHHHHHEEECCCCEEEEEECHHHHHHHHHHHHCCCCCCCCC SLTSAWQANLSRHAYRQAFQRIQAHLQAGDCYQINLTQRFSADYRGDEWQAFLRLTQANR CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHCCC APFSAFLRLPHSAVISVSPERFLQLSQGDIVTRPIKGTLPRCPMPHDDALQRLRLAASAK CHHHHHHHCCCCEEEEECHHHHHEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH DRAENLMIVDLMRNDVGRIAAPGSVSVPELFAVETFPAVHHLVSTVCARLAEGLDACDLL HHHCCEEEEEEHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RACFPGGSITGAPKIRAMEIIDTLEPQRRNLYCGSIGYISACGNMDTSITIRTLLAEHGR HHHCCCCCCCCCCCHHHHHHHHHCCCHHCCEEECCCCCEEECCCCCCHHHHHHHHHHCCC LHCWAGGGIVADSEAEAEYQETLDKVSRILPLLADGTPLLCD EEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TAIPELTQRDLPYRPDAALRYFTPLAHHPWAMLLSSAAADHAHNRYDIVVADPCATLQT CCCCCHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHC RGEQTQIATRDGACRDDGGDPLTLLRTEIDRYLPRCPPQPDLPFCGGALGLWGYDLGRRF CCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH EHLPSQAHADLQAPDMAQGIYDWALIVDHQRRRVTLLSWQDAGKRLAWLLAQTPVPAAPF HHCCCHHCCCCCCCHHHHHHHHHHHEEECCCCEEEEEECHHHHHHHHHHHHCCCCCCCCC SLTSAWQANLSRHAYRQAFQRIQAHLQAGDCYQINLTQRFSADYRGDEWQAFLRLTQANR CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHCCC APFSAFLRLPHSAVISVSPERFLQLSQGDIVTRPIKGTLPRCPMPHDDALQRLRLAASAK CHHHHHHHCCCCEEEEECHHHHHEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH DRAENLMIVDLMRNDVGRIAAPGSVSVPELFAVETFPAVHHLVSTVCARLAEGLDACDLL HHHCCEEEEEEHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RACFPGGSITGAPKIRAMEIIDTLEPQRRNLYCGSIGYISACGNMDTSITIRTLLAEHGR HHHCCCCCCCCCCCHHHHHHHHHCCCHHCCEEECCCCCEEECCCCCCHHHHHHHHHHCCC LHCWAGGGIVADSEAEAEYQETLDKVSRILPLLADGTPLLCD EEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3057324; 2251281 [H]