Click here to switch to the map view.

The map label for this gene is osmY [H]

Identifier: 238919587

GI number: 238919587

Start: 1646805

End: 1647119

Strand: Reverse

Name: osmY [H]

Synonym: NT01EI_1686

Alternate gene names: 238919587

Gene position: 1647119-1646805 (Counterclockwise)

Preceding gene: 238919588

Following gene: 238919585

Centisome position: 43.21

GC content: 55.56

Gene sequence:

>315_bases
ATGAAATGGTCGAAACAGATCCAGGTATTAGGACTGGCCGCTATTCTGGCGGCTTCACTGGCGGGCTGCGCCGGCTCCAC
CACCCAGGAGAGTACCGGTAACTACATTGATGACACCGTGGTCACCACCAAGGTGAAAAGCGCGCTGCTCAATGCCAAGA
GTATTAAATCTACAGAGATCAGCGTAGAGACCTACAAAGGACGGGTGCAGCTGAGCGGATTTGTCTCCTCCCGGGCCGAT
GCCCAGCGGGCGGTAGAGGTTGCCCGGGGCATTAAGGGCGTCCGCTCGGTCGAAAACGATATGCGTATTAAATAA

Upstream 100 bases:

>100_bases
TTTTGACTTGCCCTCTGCTGACCTATTGATATGATTATTCATAGAGCGGGACACCGTTCATGGCGGCTGTCCTTGCGCGT
CACTGCATAAGGAGAAAAGC

Downstream 100 bases:

>100_bases
CACGTTCAGGCTGCCCGCCCGGGGCAGCCTCTCTACCGCTGTTGCCGATCAGAAACGATAGCCGGCGCCGAACATAAATA
CCCACGGATTAATGTTGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MKWSKQIQVLGLAAILAASLAGCAGSTTQESTGNYIDDTVVTTKVKSALLNAKSIKSTEISVETYKGRVQLSGFVSSRAD
AQRAVEVARGIKGVRSVENDMRIK

Sequences:

>Translated_104_residues
MKWSKQIQVLGLAAILAASLAGCAGSTTQESTGNYIDDTVVTTKVKSALLNAKSIKSTEISVETYKGRVQLSGFVSSRAD
AQRAVEVARGIKGVRSVENDMRIK
>Mature_104_residues
MKWSKQIQVLGLAAILAASLAGCAGSTTQESTGNYIDDTVVTTKVKSALLNAKSIKSTEISVETYKGRVQLSGFVSSRAD
AQRAVEVARGIKGVRSVENDMRIK

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1790836, Length=84, Percent_Identity=45.2380952380952, Blast_Score=77, Evalue=2e-16,

Paralogues:

None

Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 11061; Mature: 11061

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWSKQIQVLGLAAILAASLAGCAGSTTQESTGNYIDDTVVTTKVKSALLNAKSIKSTEI
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEE
SVETYKGRVQLSGFVSSRADAQRAVEVARGIKGVRSVENDMRIK
EEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKWSKQIQVLGLAAILAASLAGCAGSTTQESTGNYIDDTVVTTKVKSALLNAKSIKSTEI
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEE
SVETYKGRVQLSGFVSSRADAQRAVEVARGIKGVRSVENDMRIK
EEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]