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The map label for this gene is selD [H]

Identifier: 238919552

GI number: 238919552

Start: 1610361

End: 1611407

Strand: Direct

Name: selD [H]

Synonym: NT01EI_1648

Alternate gene names: 238919552

Gene position: 1610361-1611407 (Clockwise)

Preceding gene: 238919551

Following gene: 238919553

Centisome position: 42.24

GC content: 63.23

Gene sequence:

>1047_bases
ATGACTGCGCCGGCCATTCGTTTGACACAGTACAGCCATGGGGCGGGGTGTGGCTGCAAAATCTCGCCGAAAGTATTGGA
GTCCATCCTGCACAGTGAGCAGGCCAGGTTTGTCGATCCCCACCTGCTGGTGGGGAATGAGACGCGCGACGACGCGGCGG
TTTACGATATCGGCAACGGGGTTGGCATTATCAGCACCACCGACTTCTTTATGCCCATCGTGGACGATCCGTATGATTTT
GGCCGTATCGCGGCCACCAATGCCATCAGTGATATCTACGCCATGGGCGGTAAACCGATCATGGCGATCGCCATCCTGGG
TTGGCCGCTGGAGAAGCTGGCGCCGGAGATTGCCCGTCAGGTTATCGAAGGGGGGCGCCAGGTGTGTCGCGAAGCCGGTA
TCTCACTGGCCGGGGGCCACTCCATTGACGCACCGGAGCCCATTTTTGGCCTGGCGGTCACCGGGACGGTCAGCACCGAG
CGGGTGAAGAAGAACAGTGCGGCGCAGGCTGGCTGTCGTCTCTACCTGACCAAGCCGCTGGGGATCGGTGTGCTGACGAC
CGCAGAGAAGAAGAGCGCGCTGCGCCCCGAACACCGTGGGCTGGCGCGCGATACCATGTGTCAGCTGAACAGTCCGGGCG
CCGACTTTGCCGATATTCAGGGCGTGACGGCGATGACCGACGTGACCGGGTTTGGCCTGCTGGGTCACCTGAGCGAGATT
TGCCAGGGCTCCGGTCTGCAGGCGACGCTGTGGTTTGATCAGATCCCGCGCCTTCCCGGCGTCGAGGCATATATCGCCCA
GGGCTGCGTGCCGGGGGGAACCGGGCGTAACTTTGACAGCTATGGGCATCTGGTTGGGTCGATGGACTCGCTGCAGCGCC
AGCTGCTGTGCGATCCGCAAACCTCCGGCGGTCTGCTGTTGGCGGTAACGCCGGAGGCCGAGGCGGCGGTACGCGACGTT
GCGCTGCGCCATGGTCTGACGCTGAGTGCCATCGGTGAACTGCACGCGCCGCGTGCGGGTGAACCGCTGATCGAGGTTCA
GGGATGA

Upstream 100 bases:

>100_bases
TTGCACTATCGCGCGGCTTATTGATCGCGTGACTTATCAATTCCCCGCGCGGGCGCTACTATTGCACGATTTTATTTTTC
TTGATGGAGAGGAGTAGGGT

Downstream 100 bases:

>100_bases
CAGGCAAGGCTGTAACCCGCCCGGATGGTACGGACTACCTCTCCATTCTGGCCAATGATATTCCGTTAATCGATGTGCGC
GCCCCGGTAGAGTTTCAGAC

Product: selenide, water dikinase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MTAPAIRLTQYSHGAGCGCKISPKVLESILHSEQARFVDPHLLVGNETRDDAAVYDIGNGVGIISTTDFFMPIVDDPYDF
GRIAATNAISDIYAMGGKPIMAIAILGWPLEKLAPEIARQVIEGGRQVCREAGISLAGGHSIDAPEPIFGLAVTGTVSTE
RVKKNSAAQAGCRLYLTKPLGIGVLTTAEKKSALRPEHRGLARDTMCQLNSPGADFADIQGVTAMTDVTGFGLLGHLSEI
CQGSGLQATLWFDQIPRLPGVEAYIAQGCVPGGTGRNFDSYGHLVGSMDSLQRQLLCDPQTSGGLLLAVTPEAEAAVRDV
ALRHGLTLSAIGELHAPRAGEPLIEVQG

Sequences:

>Translated_348_residues
MTAPAIRLTQYSHGAGCGCKISPKVLESILHSEQARFVDPHLLVGNETRDDAAVYDIGNGVGIISTTDFFMPIVDDPYDF
GRIAATNAISDIYAMGGKPIMAIAILGWPLEKLAPEIARQVIEGGRQVCREAGISLAGGHSIDAPEPIFGLAVTGTVSTE
RVKKNSAAQAGCRLYLTKPLGIGVLTTAEKKSALRPEHRGLARDTMCQLNSPGADFADIQGVTAMTDVTGFGLLGHLSEI
CQGSGLQATLWFDQIPRLPGVEAYIAQGCVPGGTGRNFDSYGHLVGSMDSLQRQLLCDPQTSGGLLLAVTPEAEAAVRDV
ALRHGLTLSAIGELHAPRAGEPLIEVQG
>Mature_347_residues
TAPAIRLTQYSHGAGCGCKISPKVLESILHSEQARFVDPHLLVGNETRDDAAVYDIGNGVGIISTTDFFMPIVDDPYDFG
RIAATNAISDIYAMGGKPIMAIAILGWPLEKLAPEIARQVIEGGRQVCREAGISLAGGHSIDAPEPIFGLAVTGTVSTER
VKKNSAAQAGCRLYLTKPLGIGVLTTAEKKSALRPEHRGLARDTMCQLNSPGADFADIQGVTAMTDVTGFGLLGHLSEIC
QGSGLQATLWFDQIPRLPGVEAYIAQGCVPGGTGRNFDSYGHLVGSMDSLQRQLLCDPQTSGGLLLAVTPEAEAAVRDVA
LRHGLTLSAIGELHAPRAGEPLIEVQG

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=366, Percent_Identity=28.4153005464481, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI15011844, Length=360, Percent_Identity=27.2222222222222, Blast_Score=99, Evalue=5e-21,
Organism=Escherichia coli, GI1788062, Length=347, Percent_Identity=74.9279538904899, Blast_Score=545, Evalue=1e-156,
Organism=Caenorhabditis elegans, GI17543426, Length=327, Percent_Identity=28.1345565749235, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24653602, Length=361, Percent_Identity=28.5318559556787, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24653604, Length=361, Percent_Identity=28.5318559556787, Blast_Score=106, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 36606; Mature: 36475

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPAIRLTQYSHGAGCGCKISPKVLESILHSEQARFVDPHLLVGNETRDDAAVYDIGNG
CCCCCEEEEECCCCCCCCCEECHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCC
VGIISTTDFFMPIVDDPYDFGRIAATNAISDIYAMGGKPIMAIAILGWPLEKLAPEIARQ
EEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHH
VIEGGRQVCREAGISLAGGHSIDAPEPIFGLAVTGTVSTERVKKNSAAQAGCRLYLTKPL
HHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHCCHHCCCCEEEEECCC
GIGVLTTAEKKSALRPEHRGLARDTMCQLNSPGADFADIQGVTAMTDVTGFGLLGHLSEI
CCEEEEECHHHHCCCCHHCCCCHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHH
CQGSGLQATLWFDQIPRLPGVEAYIAQGCVPGGTGRNFDSYGHLVGSMDSLQRQLLCDPQ
HCCCCCEEEEEHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCC
TSGGLLLAVTPEAEAAVRDVALRHGLTLSAIGELHAPRAGEPLIEVQG
CCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEECC
>Mature Secondary Structure 
TAPAIRLTQYSHGAGCGCKISPKVLESILHSEQARFVDPHLLVGNETRDDAAVYDIGNG
CCCCEEEEECCCCCCCCCEECHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCC
VGIISTTDFFMPIVDDPYDFGRIAATNAISDIYAMGGKPIMAIAILGWPLEKLAPEIARQ
EEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHH
VIEGGRQVCREAGISLAGGHSIDAPEPIFGLAVTGTVSTERVKKNSAAQAGCRLYLTKPL
HHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHCCHHCCCCEEEEECCC
GIGVLTTAEKKSALRPEHRGLARDTMCQLNSPGADFADIQGVTAMTDVTGFGLLGHLSEI
CCEEEEECHHHHCCCCHHCCCCHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHH
CQGSGLQATLWFDQIPRLPGVEAYIAQGCVPGGTGRNFDSYGHLVGSMDSLQRQLLCDPQ
HCCCCCEEEEEHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCC
TSGGLLLAVTPEAEAAVRDVALRHGLTLSAIGELHAPRAGEPLIEVQG
CCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]