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The map label for this gene is ydjA [H]

Identifier: 238919551

GI number: 238919551

Start: 1609607

End: 1610155

Strand: Direct

Name: ydjA [H]

Synonym: NT01EI_1647

Alternate gene names: 238919551

Gene position: 1609607-1610155 (Clockwise)

Preceding gene: 238919547

Following gene: 238919552

Centisome position: 42.22

GC content: 67.21

Gene sequence:

>549_bases
ATGGATGCATTAGAGCTCCTGCTGCAGCGCCGTTCCGCCTCCCGCCTGAGCGAGCCTGCTCCGTCCGGTCAGGCGCTGGA
AAACATCTTTCAGGCCGGGCTGCGCGCGCCGGATCACGGCGGCCTGCAGCCGTGGCGCTTTGTGACCGTGCAGGGCGACG
GTCGAGAGCGCCTGAGCGCGCTGCTACACGACATCGCGCTGGCCGGGGGGAGCGATGAGAAAGGCGTTGAGAAGGCCCGC
AGCGCCCCCTTTCGCGCGCCGCTGATCGTTACGGTGATTGCCCACTGCAATCGCGACAGCCGGGTGCCTCAGTGGGAGCA
GGTCGCCTCCGCCGGGTGTGCCGTGATGGCGATGCAGATGGCGGCGCAGGCGCAGGGATTTAACGGTATCTGGCGCAGCG
GCCACTGGACCGAAGAGCCTCGGGTGCGTCAGGCGTTTGGCTGCCGCGAGCAGGATGTCATCGTCGGCTTCCTCTATCTG
GGCACGCCCACCCTGAAGGCCGCCAAGGTACAGCCGCTGGATAGCAGCGCCTTTGTCCACCGGTTCTGA

Upstream 100 bases:

>100_bases
CGGGGCTGGTATCTTGCGATACGCAGGGGGATAATTGGCGTAACCTATTTGTAACATCATTATAGTCTATATGTGTTTGA
CTTATCACTTGGAGAGTTCC

Downstream 100 bases:

>100_bases
TCTTCCCGTCTCACTCATTCAGAATGCGTATCATGCGGCCCCGGAGTCAGTGGCCTCTCCGGGGCGCGATGAATGGCCAT
TTCCTGTGCATGTAACCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MDALELLLQRRSASRLSEPAPSGQALENIFQAGLRAPDHGGLQPWRFVTVQGDGRERLSALLHDIALAGGSDEKGVEKAR
SAPFRAPLIVTVIAHCNRDSRVPQWEQVASAGCAVMAMQMAAQAQGFNGIWRSGHWTEEPRVRQAFGCREQDVIVGFLYL
GTPTLKAAKVQPLDSSAFVHRF

Sequences:

>Translated_182_residues
MDALELLLQRRSASRLSEPAPSGQALENIFQAGLRAPDHGGLQPWRFVTVQGDGRERLSALLHDIALAGGSDEKGVEKAR
SAPFRAPLIVTVIAHCNRDSRVPQWEQVASAGCAVMAMQMAAQAQGFNGIWRSGHWTEEPRVRQAFGCREQDVIVGFLYL
GTPTLKAAKVQPLDSSAFVHRF
>Mature_182_residues
MDALELLLQRRSASRLSEPAPSGQALENIFQAGLRAPDHGGLQPWRFVTVQGDGRERLSALLHDIALAGGSDEKGVEKAR
SAPFRAPLIVTVIAHCNRDSRVPQWEQVASAGCAVMAMQMAAQAQGFNGIWRSGHWTEEPRVRQAFGCREQDVIVGFLYL
GTPTLKAAKVQPLDSSAFVHRF

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=183, Percent_Identity=65.5737704918033, Blast_Score=253, Evalue=4e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 19887; Mature: 19887

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALELLLQRRSASRLSEPAPSGQALENIFQAGLRAPDHGGLQPWRFVTVQGDGRERLSA
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHH
LLHDIALAGGSDEKGVEKARSAPFRAPLIVTVIAHCNRDSRVPQWEQVASAGCAVMAMQM
HHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
AAQAQGFNGIWRSGHWTEEPRVRQAFGCREQDVIVGFLYLGTPTLKAAKVQPLDSSAFVH
HHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCC
RF
CC
>Mature Secondary Structure
MDALELLLQRRSASRLSEPAPSGQALENIFQAGLRAPDHGGLQPWRFVTVQGDGRERLSA
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHH
LLHDIALAGGSDEKGVEKARSAPFRAPLIVTVIAHCNRDSRVPQWEQVASAGCAVMAMQM
HHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
AAQAQGFNGIWRSGHWTEEPRVRQAFGCREQDVIVGFLYLGTPTLKAAKVQPLDSSAFVH
HHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCC
RF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]