Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919454

Identifier: 238919454

GI number: 238919454

Start: 1513392

End: 1513622

Strand: Reverse

Name: 238919454

Synonym: NT01EI_1548

Alternate gene names: NA

Gene position: 1513622-1513392 (Counterclockwise)

Preceding gene: 238919457

Following gene: 238919453

Centisome position: 39.7

GC content: 42.42

Gene sequence:

>231_bases
ATGAACGTTAACGCTGACCATGAAAGAACCTCAAAAGAGAACATTGTACATCAGATTCAACTAATTAGAGGCATTACCGA
TGAAAAGGTGACGGCAATCCATAAAGCGCTGGATGAATGCAGCCCGAAGCATCCGATATTTTATGAAGATGATATGGATA
TCCATCTTCATCCCAAATTAATCCCTAAGTCGGTGCAGACTGTCAACTGCGTGGACAACAAAAGCGCGTAG

Upstream 100 bases:

>100_bases
TAAGTTGAAAGACGCGGCGACCGTCACGGCAGCGAAATCTGTCATGGCCTTTAGGATTCTGGCCATGGCGGTAAACCTGA
GCAGACTGACAACGGGGACA

Downstream 100 bases:

>100_bases
TGGCACCCGGCAGAATGAAAAACACTCTCTGGCTGGCGCGTTACACAGCGAAATGGACAACATCTGTCATGTGGGTGGCA
GCAGCAGAAGCTGAGTCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MNVNADHERTSKENIVHQIQLIRGITDEKVTAIHKALDECSPKHPIFYEDDMDIHLHPKLIPKSVQTVNCVDNKSA

Sequences:

>Translated_76_residues
MNVNADHERTSKENIVHQIQLIRGITDEKVTAIHKALDECSPKHPIFYEDDMDIHLHPKLIPKSVQTVNCVDNKSA
>Mature_76_residues
MNVNADHERTSKENIVHQIQLIRGITDEKVTAIHKALDECSPKHPIFYEDDMDIHLHPKLIPKSVQTVNCVDNKSA

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8671; Mature: 8671

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVNADHERTSKENIVHQIQLIRGITDEKVTAIHKALDECSPKHPIFYEDDMDIHLHPKL
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEECCCC
IPKSVQTVNCVDNKSA
CCCCCCEECCCCCCCC
>Mature Secondary Structure
MNVNADHERTSKENIVHQIQLIRGITDEKVTAIHKALDECSPKHPIFYEDDMDIHLHPKL
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEECCCC
IPKSVQTVNCVDNKSA
CCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA