| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919457
Identifier: 238919457
GI number: 238919457
Start: 1514256
End: 1515356
Strand: Reverse
Name: 238919457
Synonym: NT01EI_1551
Alternate gene names: NA
Gene position: 1515356-1514256 (Counterclockwise)
Preceding gene: 238919458
Following gene: 238919454
Centisome position: 39.75
GC content: 46.87
Gene sequence:
>1101_bases TTGCAGGCCCGCAGCACCGAGCAGGAAAAACTCACCCGGGAGACCGCTGCCTTACAGCAGCGGCTGGATACGCTCACCAC CCAAAACCATGCTCTGGAAAAAAACCTGAGTGCAGAGACGGATAAACGCAGCCAGCTGGAGCAGGCGCTGACCACAGCCC GGGCGCAGGCCTCGCAGGCACAGGCCCAGCTGGCACCGTTGCAGGCCCGCAGCACCGAGCAGGAAAAACTCACCCGGGAG ACCGCTGCCTTACAGCAGCGGCTGGATACGCTCACCACCCAAAACCACGCTCTGGAAAAAAACCTGAGTGCAGAGACGGA TAAACGCAGCCAGCTGGAGCAGGCACTGACCACAGCCCGGGCGCAGGCCTCGCAGGCACAGGCCCAGCTGGCTAAATTAG ATGCATCGGTCAAGTCTCAAGGCAAACACCCAGGAACATGGGCTGATATAAATAATTTATTTTCCGGATTTTCTCAAAGG GAGATCTTATCATCAATTGACAACAAGCATTCATATGTTATTGGTTTGGCCTTATCTGACGAGATAAAAAATAAACAAAA AGAAATGAAAAACATCGGGTTAAATTTGGAGGATAGTTTCTTTTTGGCAGGGCTGATTCATGGATACTTCAACACCTCAA GCTTACCCAAAAATAAAGAGATAGAAATCCAGCAAGGGATATCTAAAACAATCACAGATAATATCAACCGAAACCTTGAA ATGTCCGTACTGAAAATAAAAAAAGAAGTATCAGGAAAAAAGATACTTCCCGCCAGCACTGATAAATTCGTTTTCACCCT TGATAAAGAGGGAAGTCACGGATACAAACGAGGCAATACCGTTACATACAACGTAACCGAGATGAAGCTGAATGGTGAGC TAATAAGAAGCAGCACCAACAATAAAGTTACTTACAACACTGAAACCCCCGACTATATGCGAATTGCAATCAAGGAAGCC AAAAAAGGTGGTGAAATTTCCGTATATGGCTTGGCCATTAATATTTATGGCAACAACATCCCGCCGGGGATTTTTGCGGA CACCCCCGTCAAACTACAATTCAATTTAGAGCCTATATCAATAGGAGATCATTCCAAATAA
Upstream 100 bases:
>100_bases AAAAAACCTGAGTGCAGAGACGGATAAACGCAGCCAGCTGGAGCAGGCGCTGACCACAGCCCGGGCGCAGGCCTCGCAGG CACAGGCCCAGCTGGCACCG
Downstream 100 bases:
>100_bases TAAACCCCTACTCCAGCAACAATATATTGCTGGGTGATGCCTCCAATGAGTATAACATGTTTTTTTCGATAAAAGCTCCG ATGACTTTTTCGTGGTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MQARSTEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAPLQARSTEQEKLTRE TAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAKLDASVKSQGKHPGTWADINNLFSGFSQR EILSSIDNKHSYVIGLALSDEIKNKQKEMKNIGLNLEDSFFLAGLIHGYFNTSSLPKNKEIEIQQGISKTITDNINRNLE MSVLKIKKEVSGKKILPASTDKFVFTLDKEGSHGYKRGNTVTYNVTEMKLNGELIRSSTNNKVTYNTETPDYMRIAIKEA KKGGEISVYGLAINIYGNNIPPGIFADTPVKLQFNLEPISIGDHSK
Sequences:
>Translated_366_residues MQARSTEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAPLQARSTEQEKLTRE TAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAKLDASVKSQGKHPGTWADINNLFSGFSQR EILSSIDNKHSYVIGLALSDEIKNKQKEMKNIGLNLEDSFFLAGLIHGYFNTSSLPKNKEIEIQQGISKTITDNINRNLE MSVLKIKKEVSGKKILPASTDKFVFTLDKEGSHGYKRGNTVTYNVTEMKLNGELIRSSTNNKVTYNTETPDYMRIAIKEA KKGGEISVYGLAINIYGNNIPPGIFADTPVKLQFNLEPISIGDHSK >Mature_366_residues MQARSTEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAPLQARSTEQEKLTRE TAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQAQAQLAKLDASVKSQGKHPGTWADINNLFSGFSQR EILSSIDNKHSYVIGLALSDEIKNKQKEMKNIGLNLEDSFFLAGLIHGYFNTSSLPKNKEIEIQQGISKTITDNINRNLE MSVLKIKKEVSGKKILPASTDKFVFTLDKEGSHGYKRGNTVTYNVTEMKLNGELIRSSTNNKVTYNTETPDYMRIAIKEA KKGGEISVYGLAINIYGNNIPPGIFADTPVKLQFNLEPISIGDHSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40619; Mature: 40619
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQARSTEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQA CCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH QAQLAPLQARSTEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTAR HHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHH AQASQAQAQLAKLDASVKSQGKHPGTWADINNLFSGFSQREILSSIDNKHSYVIGLALSD HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECH EIKNKQKEMKNIGLNLEDSFFLAGLIHGYFNTSSLPKNKEIEIQQGISKTITDNINRNLE HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHHHCCCCCC MSVLKIKKEVSGKKILPASTDKFVFTLDKEGSHGYKRGNTVTYNVTEMKLNGELIRSSTN HHHHHHHHHCCCCEECCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCHHEECCCC NKVTYNTETPDYMRIAIKEAKKGGEISVYGLAINIYGNNIPPGIFADTPVKLQFNLEPIS CEEEECCCCCHHHHHEEHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEC IGDHSK CCCCCC >Mature Secondary Structure MQARSTEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTARAQASQA CCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH QAQLAPLQARSTEQEKLTRETAALQQRLDTLTTQNHALEKNLSAETDKRSQLEQALTTAR HHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHH AQASQAQAQLAKLDASVKSQGKHPGTWADINNLFSGFSQREILSSIDNKHSYVIGLALSD HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECH EIKNKQKEMKNIGLNLEDSFFLAGLIHGYFNTSSLPKNKEIEIQQGISKTITDNINRNLE HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHHHCCCCCC MSVLKIKKEVSGKKILPASTDKFVFTLDKEGSHGYKRGNTVTYNVTEMKLNGELIRSSTN HHHHHHHHHCCCCEECCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCHHEECCCC NKVTYNTETPDYMRIAIKEAKKGGEISVYGLAINIYGNNIPPGIFADTPVKLQFNLEPIS CEEEECCCCCHHHHHEEHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEC IGDHSK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA