| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919453
Identifier: 238919453
GI number: 238919453
Start: 1512347
End: 1512493
Strand: Reverse
Name: 238919453
Synonym: NT01EI_1547
Alternate gene names: NA
Gene position: 1512493-1512347 (Counterclockwise)
Preceding gene: 238919454
Following gene: 238919451
Centisome position: 39.67
GC content: 29.93
Gene sequence:
>147_bases ATGTCTATCTATAAGAGTATCAATCAAGATACTAAAAGCACCATTACTCCACTTTACACTTATAAAATAAATAATATTTG CAATGCTATATCTCAATCAATGATGAGTGAACTTGAGAAAGGCGTACTGCAAAGTGTAGACAAATAA
Upstream 100 bases:
>100_bases CTGCCTATTTGAAGCCAATCAATTAAAAAGCATAGACGATAAAAAATACAGCAATCAAATATTCACCTTATACAAAACTG TTTCTGAAGCAAAATATTAC
Downstream 100 bases:
>100_bases AAGAATGCCCTACATTATGCATGTACCAAAAGAGTTGCATAATGTAGGGCCTATTTAATTACGCTCATCCAGCTTATAAC ACGCACTCAAACAATCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 47
Protein sequence:
>48_residues MSIYKSINQDTKSTITPLYTYKINNICNAISQSMMSELEKGVLQSVDK
Sequences:
>Translated_48_residues MSIYKSINQDTKSTITPLYTYKINNICNAISQSMMSELEKGVLQSVDK >Mature_47_residues SIYKSINQDTKSTITPLYTYKINNICNAISQSMMSELEKGVLQSVDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5430; Mature: 5299
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIYKSINQDTKSTITPLYTYKINNICNAISQSMMSELEKGVLQSVDK CCHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SIYKSINQDTKSTITPLYTYKINNICNAISQSMMSELEKGVLQSVDK CHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA