| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is appA [H]
Identifier: 238919349
GI number: 238919349
Start: 1418892
End: 1420226
Strand: Direct
Name: appA [H]
Synonym: NT01EI_1443
Alternate gene names: 238919349
Gene position: 1418892-1420226 (Clockwise)
Preceding gene: 238919346
Following gene: 238919350
Centisome position: 37.22
GC content: 67.27
Gene sequence:
>1335_bases ATGCGCTGGTGCGAGCTGAGCCGTTGGTTATTCCCCGTATCGCTTACGCTGTTATTTCCCCTGCCGCTGAAGGCGGCGGA GGCAGCGCACCCTGTACGCCATCTGGAGAGGGTGGTGATCGTCAGCCGCCACGGCGTACGGGCGCCGACCAAAATGCCGG CGCTGATCCGTGAGGTCACCCCGGATGGGTGGCCGGTATGGCCGGTGCCACTGGGTGATCTTACGCCGCGCGGAGCGTCC CTGGTGACCCTGCTCGGCGCCTATTATCGGCAGCAGTTGAGCCGTGAGGGGCTGCTGCCCGCACAGGGGTGTCCCCCGGC AGGGTGGGTCTATGCCTGGACCGATGTGGATCAGCGTACGCGTAAAACCGGCGCGGCTTTTCTGCAGGGATTGGCACCGG GCTGTGCTGTCGCCATCCATCACCGGCCTGATGTGTCTCAGCGCGATCCCCTGTTTCATCCGGTCAAGGCGGGCCTCTGT CGACTGGATAAGGCCCGCACGCGCCGGGCGATTGAAGCGCAGGCCGGTATGCCGCTGGCCGCGCTCAATCACCGTTATGG CACCGCGCTGGCGCAGATGGCGCGGGTGCTGCATTTCGCGTCGTCGCCCTATTGCCAGCGGCGCAGCGGCGATGGGGTGT GTACCCTCGCCCGGACCATGCCAACCCGGCTGCACATGGACGCTCACGGCGCCATCGCGCTGCGCGGCGCTCTGGGCCTC TCTGCGACGCTGGCGGAGATGTTTCTGTTGCAGCAGGCGCAGGGAATGGCGCAGCCGGCCTGGGGGCGTATCGCCACCCC GGCGCAGTGGCGGTCGTTGCTCCAGCTGCATAACCTTCAGTTTGATCTGCTGTCGCGTACCGACTATATCGCCCGTCATC GCGGGACGCCGCTGATGTATACCGTGCTGCAGGCGCTGCACGGGCAGACGCCGCGCCTGCCGGGATTAACGGCGCAGAAC CGCCTGCTGCTGCTGGTCGGCCATGATACCAATCTGGCCAATCTGTCCGGCCTGCTGCAAACGCCGTGGAGCCTGCCCGG ACAGCCGGATAATACGCCGCCCGGCGGCGAACTGCGTTTTGAGCGTTGGCGCGACAGCACGGGTCGCGCCTGGGTGCGGG TGAGCGTGGTCTACCAGTCGCTGGCGCAGCTGCGCCGGCAGAGCCGCCTGACGCTGCCGCTGCCGCCGCATCAGATGACC CTGGCGTTGCCGGGATGCCGGGGGGAGATGGCGGATGGCCTCTGTCCACTGGATGCCTTCAGCCAGTGGCTCTCCTCCCG CCTGATCCCGGCGTGTCTGCCGGTGCCCGACGGCGCGACAAACGCAATGGAGTAA
Upstream 100 bases:
>100_bases TTTTTACCGCCCGGGCGGAATAATCGGACGGTGGGATTTACACTGAATCAAATAGGCCAGCATGGCCAAATCTTGTCGAA ATTATGCCTTGGAGGCAAAA
Downstream 100 bases:
>100_bases GCCCGGCCCGCCGTCCGGCAGCGGCGGCGCCCTCCCGCGGTGGTTTGGCGCCCCCCTTTCCGCAGTACCCGGTGCACCGC CTGCCGTGCCGCTTTTTCCA
Product: phosphoanhydride phosphorylase
Products: NA
Alternate protein names: Phosphoanhydride phosphohydrolase; pH 2.5 acid phosphatase; AP; 4-phytase [H]
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MRWCELSRWLFPVSLTLLFPLPLKAAEAAHPVRHLERVVIVSRHGVRAPTKMPALIREVTPDGWPVWPVPLGDLTPRGAS LVTLLGAYYRQQLSREGLLPAQGCPPAGWVYAWTDVDQRTRKTGAAFLQGLAPGCAVAIHHRPDVSQRDPLFHPVKAGLC RLDKARTRRAIEAQAGMPLAALNHRYGTALAQMARVLHFASSPYCQRRSGDGVCTLARTMPTRLHMDAHGAIALRGALGL SATLAEMFLLQQAQGMAQPAWGRIATPAQWRSLLQLHNLQFDLLSRTDYIARHRGTPLMYTVLQALHGQTPRLPGLTAQN RLLLLVGHDTNLANLSGLLQTPWSLPGQPDNTPPGGELRFERWRDSTGRAWVRVSVVYQSLAQLRRQSRLTLPLPPHQMT LALPGCRGEMADGLCPLDAFSQWLSSRLIPACLPVPDGATNAME
Sequences:
>Translated_444_residues MRWCELSRWLFPVSLTLLFPLPLKAAEAAHPVRHLERVVIVSRHGVRAPTKMPALIREVTPDGWPVWPVPLGDLTPRGAS LVTLLGAYYRQQLSREGLLPAQGCPPAGWVYAWTDVDQRTRKTGAAFLQGLAPGCAVAIHHRPDVSQRDPLFHPVKAGLC RLDKARTRRAIEAQAGMPLAALNHRYGTALAQMARVLHFASSPYCQRRSGDGVCTLARTMPTRLHMDAHGAIALRGALGL SATLAEMFLLQQAQGMAQPAWGRIATPAQWRSLLQLHNLQFDLLSRTDYIARHRGTPLMYTVLQALHGQTPRLPGLTAQN RLLLLVGHDTNLANLSGLLQTPWSLPGQPDNTPPGGELRFERWRDSTGRAWVRVSVVYQSLAQLRRQSRLTLPLPPHQMT LALPGCRGEMADGLCPLDAFSQWLSSRLIPACLPVPDGATNAME >Mature_444_residues MRWCELSRWLFPVSLTLLFPLPLKAAEAAHPVRHLERVVIVSRHGVRAPTKMPALIREVTPDGWPVWPVPLGDLTPRGAS LVTLLGAYYRQQLSREGLLPAQGCPPAGWVYAWTDVDQRTRKTGAAFLQGLAPGCAVAIHHRPDVSQRDPLFHPVKAGLC RLDKARTRRAIEAQAGMPLAALNHRYGTALAQMARVLHFASSPYCQRRSGDGVCTLARTMPTRLHMDAHGAIALRGALGL SATLAEMFLLQQAQGMAQPAWGRIATPAQWRSLLQLHNLQFDLLSRTDYIARHRGTPLMYTVLQALHGQTPRLPGLTAQN RLLLLVGHDTNLANLSGLLQTPWSLPGQPDNTPPGGELRFERWRDSTGRAWVRVSVVYQSLAQLRRQSRLTLPLPPHQMT LALPGCRGEMADGLCPLDAFSQWLSSRLIPACLPVPDGATNAME
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidine acid phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1787215, Length=423, Percent_Identity=49.645390070922, Blast_Score=401, Evalue=1e-113, Organism=Escherichia coli, GI1787237, Length=398, Percent_Identity=32.4120603015075, Blast_Score=216, Evalue=2e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000560 [H]
Pfam domain/function: PF00328 Acid_phosphat_A [H]
EC number: =3.1.3.2; =3.1.3.26 [H]
Molecular weight: Translated: 48928; Mature: 48928
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: PS00616 HIS_ACID_PHOSPHAT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWCELSRWLFPVSLTLLFPLPLKAAEAAHPVRHLERVVIVSRHGVRAPTKMPALIREVT CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCC PDGWPVWPVPLGDLTPRGASLVTLLGAYYRQQLSREGLLPAQGCPPAGWVYAWTDVDQRT CCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHH RKTGAAFLQGLAPGCAVAIHHRPDVSQRDPLFHPVKAGLCRLDKARTRRAIEAQAGMPLA HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH ALNHRYGTALAQMARVLHFASSPYCQRRSGDGVCTLARTMPTRLHMDAHGAIALRGALGL HHCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEHHHCCCEEEECCCCCEEEECHHCH SATLAEMFLLQQAQGMAQPAWGRIATPAQWRSLLQLHNLQFDLLSRTDYIARHRGTPLMY HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHH TVLQALHGQTPRLPGLTAQNRLLLLVGHDTNLANLSGLLQTPWSLPGQPDNTPPGGELRF HHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEH ERWRDSTGRAWVRVSVVYQSLAQLRRQSRLTLPLPPHQMTLALPGCRGEMADGLCPLDAF HHHCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHCCCCCHHHH SQWLSSRLIPACLPVPDGATNAME HHHHHHCCCCEEECCCCCCCCCCC >Mature Secondary Structure MRWCELSRWLFPVSLTLLFPLPLKAAEAAHPVRHLERVVIVSRHGVRAPTKMPALIREVT CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCC PDGWPVWPVPLGDLTPRGASLVTLLGAYYRQQLSREGLLPAQGCPPAGWVYAWTDVDQRT CCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHH RKTGAAFLQGLAPGCAVAIHHRPDVSQRDPLFHPVKAGLCRLDKARTRRAIEAQAGMPLA HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH ALNHRYGTALAQMARVLHFASSPYCQRRSGDGVCTLARTMPTRLHMDAHGAIALRGALGL HHCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEHHHCCCEEEECCCCCEEEECHHCH SATLAEMFLLQQAQGMAQPAWGRIATPAQWRSLLQLHNLQFDLLSRTDYIARHRGTPLMY HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHH TVLQALHGQTPRLPGLTAQNRLLLLVGHDTNLANLSGLLQTPWSLPGQPDNTPPGGELRF HHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEH ERWRDSTGRAWVRVSVVYQSLAQLRRQSRLTLPLPPHQMTLALPGCRGEMADGLCPLDAF HHHCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHCCCCCHHHH SQWLSSRLIPACLPVPDGATNAME HHHHHHCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2168385; 8905232; 9278503; 3038201; 1658595; 8387749; 10696472; 1429631; 10655611 [H]