Click here to switch to the map view.

The map label for this gene is arnE [H]

Identifier: 238919327

GI number: 238919327

Start: 1406735

End: 1407070

Strand: Direct

Name: arnE [H]

Synonym: NT01EI_1418

Alternate gene names: 238919327

Gene position: 1406735-1407070 (Clockwise)

Preceding gene: 238919326

Following gene: 238919328

Centisome position: 36.9

GC content: 59.23

Gene sequence:

>336_bases
ATGAGCTATCTGCTGATCATGTTATCCAGCCTGCTCAGCTGCGCAGGACAGCTGTGCCAGAAACAGGCTATGTGCGGTGT
GCCCCGCGGCTCACCGCGCCGCCACCTGCTGCGCTGGCTGATGCTGGCGCTGATCTGTCTGGGGCTGGCACTGCTGCTGT
GGCTGGTGGTGCTCAGCCGGGTGGCGGTCAGCGTGGCTTACCCGATGCTGAGTCTAAACTATGTCCTGGTGCTGCTGGCG
GCGCGTTTTATTTGGCATGAGCGGTTAAACTGGCGCCATATTGTCGGGATAACGCTGATTATGTTGGGTATCATCCTGCT
GGGAGTCAACGCATGA

Upstream 100 bases:

>100_bases
TACTGCTGCCGCGCGACGGACAGATTAACCCGGCGCTGCCGTCGGCGGATATGACTTTGCGTAAAGGGCGTTTCCTGCTG
TTACAGTATCAGCAGCAGCC

Downstream 100 bases:

>100_bases
TAGGCTATCTGTGGGCACTCGCCAGCGTCGTGCTGGTCAGCGCGGCGCAGCTGATGATGCGTTATACCATGATGCATTGC
AGCGACGGGACACAGCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnE; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnE [H]

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSYLLIMLSSLLSCAGQLCQKQAMCGVPRGSPRRHLLRWLMLALICLGLALLLWLVVLSRVAVSVAYPMLSLNYVLVLLA
ARFIWHERLNWRHIVGITLIMLGIILLGVNA

Sequences:

>Translated_111_residues
MSYLLIMLSSLLSCAGQLCQKQAMCGVPRGSPRRHLLRWLMLALICLGLALLLWLVVLSRVAVSVAYPMLSLNYVLVLLA
ARFIWHERLNWRHIVGITLIMLGIILLGVNA
>Mature_110_residues
SYLLIMLSSLLSCAGQLCQKQAMCGVPRGSPRRHLLRWLMLALICLGLALLLWLVVLSRVAVSVAYPMLSLNYVLVLLAA
RFIWHERLNWRHIVGITLIMLGIILLGVNA

Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI87082074, Length=108, Percent_Identity=55.5555555555556, Blast_Score=97, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620
- InterPro:   IPR022883 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 12438; Mature: 12307

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYLLIMLSSLLSCAGQLCQKQAMCGVPRGSPRRHLLRWLMLALICLGLALLLWLVVLSR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAVSVAYPMLSLNYVLVLLAARFIWHERLNWRHIVGITLIMLGIILLGVNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SYLLIMLSSLLSCAGQLCQKQAMCGVPRGSPRRHLLRWLMLALICLGLALLLWLVVLSR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAVSVAYPMLSLNYVLVLLAARFIWHERLNWRHIVGITLIMLGIILLGVNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA