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The map label for this gene is arnF [H]

Identifier: 238919328

GI number: 238919328

Start: 1407067

End: 1407450

Strand: Direct

Name: arnF [H]

Synonym: NT01EI_1419

Alternate gene names: 238919328

Gene position: 1407067-1407450 (Clockwise)

Preceding gene: 238919327

Following gene: 238919329

Centisome position: 36.91

GC content: 59.64

Gene sequence:

>384_bases
ATGATAGGCTATCTGTGGGCACTCGCCAGCGTCGTGCTGGTCAGCGCGGCGCAGCTGATGATGCGTTATACCATGATGCA
TTGCAGCGACGGGACACAGCTTATCTCCGCGTTGCTCAGCGCAGCGCCCTGGGTCTGGTGGTTACCGGGCGGTATCTTGT
GCTATGGCCTGTCGATGCTGTGCTGGCTGTTTGCACTGCGCGATCTGCCACTGAATCGGGCCTATCCACTGCTGAGCCTC
AGCTATGTGCTGGTCTGCGCCCTGGCGGTCTCCCTGCCACTGTTCGGTGAACGGCTTAACGGGGGAAAGCTATTGGGAAT
GGGCTTGATTATACTGGGTTTGCTGGTGATTTACCCCCCCTGGCGCCGTGCGGGGAAACCGTGA

Upstream 100 bases:

>100_bases
TGCTGGCGGCGCGTTTTATTTGGCATGAGCGGTTAAACTGGCGCCATATTGTCGGGATAACGCTGATTATGTTGGGTATC
ATCCTGCTGGGAGTCAACGC

Downstream 100 bases:

>100_bases
CAGCGGCGGTTGTCCCGTTAACCTGCCAGCGACGGAATAACCATTTTATTTGATAAATTGCGTGAATATTTGTAGCGGCG
TAGACTGATCTCACACCCCC

Product: membrane protein YfbJ

Products: NA

Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnF; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF [H]

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MIGYLWALASVVLVSAAQLMMRYTMMHCSDGTQLISALLSAAPWVWWLPGGILCYGLSMLCWLFALRDLPLNRAYPLLSL
SYVLVCALAVSLPLFGERLNGGKLLGMGLIILGLLVIYPPWRRAGKP

Sequences:

>Translated_127_residues
MIGYLWALASVVLVSAAQLMMRYTMMHCSDGTQLISALLSAAPWVWWLPGGILCYGLSMLCWLFALRDLPLNRAYPLLSL
SYVLVCALAVSLPLFGERLNGGKLLGMGLIILGLLVIYPPWRRAGKP
>Mature_127_residues
MIGYLWALASVVLVSAAQLMMRYTMMHCSDGTQLISALLSAAPWVWWLPGGILCYGLSMLCWLFALRDLPLNRAYPLLSL
SYVLVCALAVSLPLFGERLNGGKLLGMGLIILGLLVIYPPWRRAGKP

Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArnF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022832
- InterPro:   IPR000390 [H]

Pfam domain/function: PF00893 Multi_Drug_Res [H]

EC number: NA

Molecular weight: Translated: 13968; Mature: 13968

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGYLWALASVVLVSAAQLMMRYTMMHCSDGTQLISALLSAAPWVWWLPGGILCYGLSML
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCHHHHHHHHHHHH
CWLFALRDLPLNRAYPLLSLSYVLVCALAVSLPLFGERLNGGKLLGMGLIILGLLVIYPP
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
WRRAGKP
HHCCCCC
>Mature Secondary Structure
MIGYLWALASVVLVSAAQLMMRYTMMHCSDGTQLISALLSAAPWVWWLPGGILCYGLSML
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCHHHHHHHHHHHH
CWLFALRDLPLNRAYPLLSLSYVLVCALAVSLPLFGERLNGGKLLGMGLIILGLLVIYPP
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
WRRAGKP
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA