| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is maeB [H]
Identifier: 238919162
GI number: 238919162
Start: 1225916
End: 1228195
Strand: Direct
Name: maeB [H]
Synonym: NT01EI_1233
Alternate gene names: 238919162
Gene position: 1225916-1228195 (Clockwise)
Preceding gene: 238919161
Following gene: 238919163
Centisome position: 32.16
GC content: 61.93
Gene sequence:
>2280_bases ATGGATGAAAAATTAAAACAAAGTGCGCTTGAGTTTCATCAGTATCCCGTTGCGGGGAAAATCCAGGTTGTTCCCACCAA GCCGCTGGCGACCCAGCGCGATTTGGCGCTGGCCTATTCACCGGGCGTTGCCGCGCCCTGTCTGGAGATCGCTGACGATC CGTTAGCGGCCTATAAGTATACCGCGCGCGGAAATCTGGTAGGGGTCATCTCTAATGGTACCGCCGTGCTGGGGCTTGGC AACATCGGTGCCCTGGCAGGGAAGCCGGTGATGGAAGGTAAAGGGGTGTTGTTCAAGAAATTCGCCGGTATCGACGTGTT TGATATTGAGGTGGATGAGCACGATCCTGACAAGCTGATCGAGGTGATCGCCGCGCTGGAGCCCACCTTTGGCGGCATCA ACCTTGAAGACATCAAGGCGCCGGAGTGTTTCTATATTGAAAAGAAGCTGCGCGAGCGGATGAAAATCCCGGTGTTCCAC GACGATCAGCACGGCACGGCGATCATCTGTACCGCCGCCGTACTCAACGGCCTGCGGGTGGTCGACAAACCGATCGATCG GGTGCGGCTGGTGGTCTCCGGCGCCGGCGCATCGGCGATCGCCTGCCTGAACCTACTGGTGGCGTTGGGGCTGAAGCGTG AAAATATCACTGCCTGCGACTCCAAGGGGGTGATCTACCGCGGGCGCGACGCGCACCTGGTCGAGAGCAAGGCGGCCTAT GCCATCGATGACAATGGCTGGCGTACGCTGGCGGATGCGATCCCCGGCGCGGATATTTTCCTGGGCTGCTCCGGCCCCGG GGTGCTGACGCAGGAGATGGTAAAAACCATGGCGCCGTCACCGCTGATCCTGGCGCTGGCCAACCCGGAGCCGGAGATCC TGCCGCCGCTGGCCAAGGCGGTTCGCCCCGATGCGATAATCTGTACCGGCCGATCTGACTTCCCCAACCAGGTGAACAAC GTGCTGTGCTTTCCGTTTATCTTCCGCGGTGCGCTGGACGTCGGGGCGACCACCATCAATGAGGAGATGAAGCTGGCGGC GGTGCGCGCCATTGCCGATCTGGCGCTGGCGGAGCAGAGTGAGGTGGTCGCCTCTGCCTACGGTGATCAGTCGCTCTCCT TCGGGCCGGAGTACATTATTCCCAAGCCCTTCGATCCGCGGCTGATCGTGAAAATTGCGCCGGCGGTGGCGCAGGCGGCG ATGGACTCCGGGGTGGCGACGCGTCCCATCGATGATATGGACGCCTATATCGAGCACCTGACCGAGTTTGTCTACAAGAC CACCCTGTTTATGAAGCCGGTATTTTCCCAGGCGCGCCAGGATCCCAAGCGGGTCGTGCTGGCGGAGGGGGAGTCGGAGC GCGTGCTGCACGCCACCCAGGAGCTGGTGACGCTGGGGCTGGCCAAGCCGATCCTGATCGGGCGTCCGCAGGTCATCGCT CACCGGCTGGAGAAGCTCGGTCTGCACATCGAGATCGGCCGCGATGTCGAGGTGGTCAATAATGAATCCGACCCGCGTTA TAACGACTATTGGCAAAGCTATTACGGGATCATGAAGCGGCGCGGGATCTCGCAGGCGCAGGCGCGCCGGGCGCTGATTG CCGATCCGACGGTGATCGCGGCGATCATGGTCAAGCGTGGCGAGGCCGACGCGATGATCTGCGGTACCGAGGGCAACTAC CAGGATCACTACCGCGTGGTGCGCGAGGTGTTTGGCTACAGTGACGGATGCCATACGGCCGCTGCGATGAATGCCCTGCT ACTGCCGAGTGGCAACACCTTTATTGCCGATACCTATGTTAACGAGGACCCGAGCGCCGAGCAGCTGGCTGAGATTGTGC TGATGTCTGCCGACGCGGTGCGTCGCTTCGGTATCGAGCCGAAGGTCGCGCTGCTCTCCCACTCCAACTTTGGCACGGCC GACTGCCCGTCATCGCGCAAAATGCGCCGGGTACTGGAGCTGGTACAGCAGGCAGCACCGGGGCTGGAGATCGACGGTGA GATGCACGGTGACGCGGCGCTGGTGGAGAGCACCCGTCTGAGGCAGATGCCGGACAGCCCGCTGAAGGGGGCGGCGAATA TCCTGATCATGCCCAATATGGAGGCCGCACGCATCAGCTATAACCTGCTGCGGGTCTCCTCCTCGGAGGGGGTTACCGTC GGGCCGGTGCTGATGGGGATCAGCAAGCCGGTGCATATTCTGACGCCGATCGCCTCCGTGCGCCGTATCGTCAATATGGT GGCGCTGTCGGTGGTGGAGGCGCAGAGCAGGACGCTGTAG
Upstream 100 bases:
>100_bases TTTCACAAAACATTTACAGAGTGATAAAGAATCTAGCCCGGCGGCGTCGGGGACGATGGCGGCCGCGGCGCTCGGGGAAT TAGCAAAAAGGAAACCAACG
Downstream 100 bases:
>100_bases CCCCGTGATCATGCCGCCTGCGGGCGGCATTTTCGGGTCTCTTGAACCCCCCGGTATGTCGGGGGATATTTATTCTCTGC GCACCGGTACGACGGTGACG
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 759; Mature: 759
Protein sequence:
>759_residues MDEKLKQSALEFHQYPVAGKIQVVPTKPLATQRDLALAYSPGVAAPCLEIADDPLAAYKYTARGNLVGVISNGTAVLGLG NIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDEHDPDKLIEVIAALEPTFGGINLEDIKAPECFYIEKKLRERMKIPVFH DDQHGTAIICTAAVLNGLRVVDKPIDRVRLVVSGAGASAIACLNLLVALGLKRENITACDSKGVIYRGRDAHLVESKAAY AIDDNGWRTLADAIPGADIFLGCSGPGVLTQEMVKTMAPSPLILALANPEPEILPPLAKAVRPDAIICTGRSDFPNQVNN VLCFPFIFRGALDVGATTINEEMKLAAVRAIADLALAEQSEVVASAYGDQSLSFGPEYIIPKPFDPRLIVKIAPAVAQAA MDSGVATRPIDDMDAYIEHLTEFVYKTTLFMKPVFSQARQDPKRVVLAEGESERVLHATQELVTLGLAKPILIGRPQVIA HRLEKLGLHIEIGRDVEVVNNESDPRYNDYWQSYYGIMKRRGISQAQARRALIADPTVIAAIMVKRGEADAMICGTEGNY QDHYRVVREVFGYSDGCHTAAAMNALLLPSGNTFIADTYVNEDPSAEQLAEIVLMSADAVRRFGIEPKVALLSHSNFGTA DCPSSRKMRRVLELVQQAAPGLEIDGEMHGDAALVESTRLRQMPDSPLKGAANILIMPNMEAARISYNLLRVSSSEGVTV GPVLMGISKPVHILTPIASVRRIVNMVALSVVEAQSRTL
Sequences:
>Translated_759_residues MDEKLKQSALEFHQYPVAGKIQVVPTKPLATQRDLALAYSPGVAAPCLEIADDPLAAYKYTARGNLVGVISNGTAVLGLG NIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDEHDPDKLIEVIAALEPTFGGINLEDIKAPECFYIEKKLRERMKIPVFH DDQHGTAIICTAAVLNGLRVVDKPIDRVRLVVSGAGASAIACLNLLVALGLKRENITACDSKGVIYRGRDAHLVESKAAY AIDDNGWRTLADAIPGADIFLGCSGPGVLTQEMVKTMAPSPLILALANPEPEILPPLAKAVRPDAIICTGRSDFPNQVNN VLCFPFIFRGALDVGATTINEEMKLAAVRAIADLALAEQSEVVASAYGDQSLSFGPEYIIPKPFDPRLIVKIAPAVAQAA MDSGVATRPIDDMDAYIEHLTEFVYKTTLFMKPVFSQARQDPKRVVLAEGESERVLHATQELVTLGLAKPILIGRPQVIA HRLEKLGLHIEIGRDVEVVNNESDPRYNDYWQSYYGIMKRRGISQAQARRALIADPTVIAAIMVKRGEADAMICGTEGNY QDHYRVVREVFGYSDGCHTAAAMNALLLPSGNTFIADTYVNEDPSAEQLAEIVLMSADAVRRFGIEPKVALLSHSNFGTA DCPSSRKMRRVLELVQQAAPGLEIDGEMHGDAALVESTRLRQMPDSPLKGAANILIMPNMEAARISYNLLRVSSSEGVTV GPVLMGISKPVHILTPIASVRRIVNMVALSVVEAQSRTL >Mature_759_residues MDEKLKQSALEFHQYPVAGKIQVVPTKPLATQRDLALAYSPGVAAPCLEIADDPLAAYKYTARGNLVGVISNGTAVLGLG NIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDEHDPDKLIEVIAALEPTFGGINLEDIKAPECFYIEKKLRERMKIPVFH DDQHGTAIICTAAVLNGLRVVDKPIDRVRLVVSGAGASAIACLNLLVALGLKRENITACDSKGVIYRGRDAHLVESKAAY AIDDNGWRTLADAIPGADIFLGCSGPGVLTQEMVKTMAPSPLILALANPEPEILPPLAKAVRPDAIICTGRSDFPNQVNN VLCFPFIFRGALDVGATTINEEMKLAAVRAIADLALAEQSEVVASAYGDQSLSFGPEYIIPKPFDPRLIVKIAPAVAQAA MDSGVATRPIDDMDAYIEHLTEFVYKTTLFMKPVFSQARQDPKRVVLAEGESERVLHATQELVTLGLAKPILIGRPQVIA HRLEKLGLHIEIGRDVEVVNNESDPRYNDYWQSYYGIMKRRGISQAQARRALIADPTVIAAIMVKRGEADAMICGTEGNY QDHYRVVREVFGYSDGCHTAAAMNALLLPSGNTFIADTYVNEDPSAEQLAEIVLMSADAVRRFGIEPKVALLSHSNFGTA DCPSSRKMRRVLELVQQAAPGLEIDGEMHGDAALVESTRLRQMPDSPLKGAANILIMPNMEAARISYNLLRVSSSEGVTV GPVLMGISKPVHILTPIASVRRIVNMVALSVVEAQSRTL
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI62420882, Length=345, Percent_Identity=26.9565217391304, Blast_Score=83, Evalue=1e-15, Organism=Homo sapiens, GI62420880, Length=345, Percent_Identity=26.9565217391304, Blast_Score=83, Evalue=1e-15, Organism=Homo sapiens, GI239049447, Length=345, Percent_Identity=26.9565217391304, Blast_Score=83, Evalue=1e-15, Organism=Homo sapiens, GI4505143, Length=401, Percent_Identity=26.1845386533666, Blast_Score=80, Evalue=9e-15, Organism=Homo sapiens, GI4505145, Length=376, Percent_Identity=26.3297872340426, Blast_Score=69, Evalue=2e-11, Organism=Escherichia coli, GI1788806, Length=759, Percent_Identity=81.5546772068511, Blast_Score=1283, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=348, Percent_Identity=30.7471264367816, Blast_Score=157, Evalue=3e-39, Organism=Escherichia coli, GI1788800, Length=325, Percent_Identity=32.6153846153846, Blast_Score=146, Evalue=5e-36, Organism=Caenorhabditis elegans, GI17537199, Length=417, Percent_Identity=28.0575539568345, Blast_Score=78, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6322823, Length=268, Percent_Identity=28.3582089552239, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI78707242, Length=407, Percent_Identity=25.5528255528256, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI78707238, Length=407, Percent_Identity=25.5528255528256, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI24646388, Length=345, Percent_Identity=28.695652173913, Blast_Score=82, Evalue=2e-15, Organism=Drosophila melanogaster, GI24646386, Length=345, Percent_Identity=28.695652173913, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI78707240, Length=348, Percent_Identity=25.8620689655172, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI281362674, Length=474, Percent_Identity=25.1054852320675, Blast_Score=76, Evalue=8e-14, Organism=Drosophila melanogaster, GI21356279, Length=474, Percent_Identity=25.1054852320675, Blast_Score=76, Evalue=9e-14, Organism=Drosophila melanogaster, GI281362672, Length=474, Percent_Identity=25.1054852320675, Blast_Score=76, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 82004; Mature: 82004
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEKLKQSALEFHQYPVAGKIQVVPTKPLATQRDLALAYSPGVAAPCLEIADDPLAAYKY CCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCHHHHCCCCHHHEEE TARGNLVGVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDEHDPDKLI ECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEHCCCCEEEEEEECCCCHHHHH EVIAALEPTFGGINLEDIKAPECFYIEKKLRERMKIPVFHDDQHGTAIICTAAVLNGLRV HHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCEEEEHHHHHCCHHH VDKPIDRVRLVVSGAGASAIACLNLLVALGLKRENITACDSKGVIYRGRDAHLVESKAAY HCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEECCCCCEEECCCCEEECCCCEE AIDDNGWRTLADAIPGADIFLGCSGPGVLTQEMVKTMAPSPLILALANPEPEILPPLAKA EECCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH VRPDAIICTGRSDFPNQVNNVLCFPFIFRGALDVGATTINEEMKLAAVRAIADLALAEQS CCCCEEEEECCCCCCHHHHCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH EVVASAYGDQSLSFGPEYIIPKPFDPRLIVKIAPAVAQAAMDSGVATRPIDDMDAYIEHL HHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHH TEFVYKTTLFMKPVFSQARQDPKRVVLAEGESERVLHATQELVTLGLAKPILIGRPQVIA HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH HRLEKLGLHIEIGRDVEVVNNESDPRYNDYWQSYYGIMKRRGISQAQARRALIADPTVIA HHHHHCCEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHH AIMVKRGEADAMICGTEGNYQDHYRVVREVFGYSDGCHTAAAMNALLLPSGNTFIADTYV HHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCEEEEEECC NEDPSAEQLAEIVLMSADAVRRFGIEPKVALLSHSNFGTADCPSSRKMRRVLELVQQAAP CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC GLEIDGEMHGDAALVESTRLRQMPDSPLKGAANILIMPNMEAARISYNLLRVSSSEGVTV CCEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHEEEEEEEEECCCCCEE GPVLMGISKPVHILTPIASVRRIVNMVALSVVEAQSRTL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDEKLKQSALEFHQYPVAGKIQVVPTKPLATQRDLALAYSPGVAAPCLEIADDPLAAYKY CCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCHHHHCCCCHHHEEE TARGNLVGVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDEHDPDKLI ECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEHCCCCEEEEEEECCCCHHHHH EVIAALEPTFGGINLEDIKAPECFYIEKKLRERMKIPVFHDDQHGTAIICTAAVLNGLRV HHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCEEEEHHHHHCCHHH VDKPIDRVRLVVSGAGASAIACLNLLVALGLKRENITACDSKGVIYRGRDAHLVESKAAY HCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEECCCCCEEECCCCEEECCCCEE AIDDNGWRTLADAIPGADIFLGCSGPGVLTQEMVKTMAPSPLILALANPEPEILPPLAKA EECCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH VRPDAIICTGRSDFPNQVNNVLCFPFIFRGALDVGATTINEEMKLAAVRAIADLALAEQS CCCCEEEEECCCCCCHHHHCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH EVVASAYGDQSLSFGPEYIIPKPFDPRLIVKIAPAVAQAAMDSGVATRPIDDMDAYIEHL HHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHH TEFVYKTTLFMKPVFSQARQDPKRVVLAEGESERVLHATQELVTLGLAKPILIGRPQVIA HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH HRLEKLGLHIEIGRDVEVVNNESDPRYNDYWQSYYGIMKRRGISQAQARRALIADPTVIA HHHHHCCEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHH AIMVKRGEADAMICGTEGNYQDHYRVVREVFGYSDGCHTAAAMNALLLPSGNTFIADTYV HHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCEEEEEECC NEDPSAEQLAEIVLMSADAVRRFGIEPKVALLSHSNFGTADCPSSRKMRRVLELVQQAAP CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC GLEIDGEMHGDAALVESTRLRQMPDSPLKGAANILIMPNMEAARISYNLLRVSSSEGVTV CCEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHEEEEEEEEECCCCCEE GPVLMGISKPVHILTPIASVRRIVNMVALSVVEAQSRTL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]