| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919163
Identifier: 238919163
GI number: 238919163
Start: 1228324
End: 1229118
Strand: Direct
Name: 238919163
Synonym: NT01EI_1235
Alternate gene names: NA
Gene position: 1228324-1229118 (Clockwise)
Preceding gene: 238919162
Following gene: 238919167
Centisome position: 32.22
GC content: 67.92
Gene sequence:
>795_bases ATGATGTTGACCCTGGCACTGCTGGCGCTGAGCGGCTGTCAAATGTCGGCGCCGGTGGCGGAGCGGATTGTTTCACTGGC GGATGGTCAGACGCTGACGCCGGTGCAGCTGGCCCAGCGTCTGGCCTCATCGCCGCGGGTCATCGTCGGCGAGCGGCACG ATAACCCGCGTCATCAGCAGATAGCGCGCTGGCTGCTGCTGCAGATGTCGTCCCTGCGACCGCAGGGCAGCGTGCTGCTG GAGATGCTGACGCCGGATCAGCAGGCTGGCGTGGCGGCGGCGCGTGAACCATCGCTGTCAGATGCGCAGGTGATGGCCCT GCTGCAGTGGCAGTCGGGCTGGCCGTGGGCGCAGTATGGCCCGCTGGTCCGCAGCGCACTGCGGGGCAGCTATCCGCTGC TGGCGGCGAACTTGGGGCGCGATGCGCTGGCGGAGATCCGCCGTCGGCCACAGTCACCGCCGGGGGCGCTCAGTACCCAG GATGCGGTGCAAATTGAGATTAGCGCCGCGTTGCGCGGCGCCCATGAGACGCTGGATAGCGCACAGCTGACGCAACGTCT GGCGGTGCAGCAGTGGCGCGATCGGCGTATGGCGCAGGCGCTGTTGGCGGCACCATTGCCGGCGCTGTTTATCACCGGCG CCTTTCACGCGCGTCGCGATCTCGGCGTGCCGCTGCATATTGAGGACGAGGAGCCGCTGACGGAGGTCTGCGTGCTGATC CTGGCGTCGCCCGGCGCCCTGGTTGGAGAGGTGCAGGCGGACTATGTCTGGTATACCGCGTCAGCGCGCCTGTAG
Upstream 100 bases:
>100_bases ATTTTCGGGTCTCTTGAACCCCCCGGTATGTCGGGGGATATTTATTCTCTGCGCACCGGTACGACGGTGACGCGGCAGCG GGGGAGGATCGATGCGAACG
Downstream 100 bases:
>100_bases CCACAGCTGTAGCTGATTGGCGAACATCTGGCGCTCGCGTGGCCCCAGAGGTGCCGGACCGCCGCTCTGGATGCCGCTGG CGCGCAGGGTCTCCATAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MMLTLALLALSGCQMSAPVAERIVSLADGQTLTPVQLAQRLASSPRVIVGERHDNPRHQQIARWLLLQMSSLRPQGSVLL EMLTPDQQAGVAAAREPSLSDAQVMALLQWQSGWPWAQYGPLVRSALRGSYPLLAANLGRDALAEIRRRPQSPPGALSTQ DAVQIEISAALRGAHETLDSAQLTQRLAVQQWRDRRMAQALLAAPLPALFITGAFHARRDLGVPLHIEDEEPLTEVCVLI LASPGALVGEVQADYVWYTASARL
Sequences:
>Translated_264_residues MMLTLALLALSGCQMSAPVAERIVSLADGQTLTPVQLAQRLASSPRVIVGERHDNPRHQQIARWLLLQMSSLRPQGSVLL EMLTPDQQAGVAAAREPSLSDAQVMALLQWQSGWPWAQYGPLVRSALRGSYPLLAANLGRDALAEIRRRPQSPPGALSTQ DAVQIEISAALRGAHETLDSAQLTQRLAVQQWRDRRMAQALLAAPLPALFITGAFHARRDLGVPLHIEDEEPLTEVCVLI LASPGALVGEVQADYVWYTASARL >Mature_264_residues MMLTLALLALSGCQMSAPVAERIVSLADGQTLTPVQLAQRLASSPRVIVGERHDNPRHQQIARWLLLQMSSLRPQGSVLL EMLTPDQQAGVAAAREPSLSDAQVMALLQWQSGWPWAQYGPLVRSALRGSYPLLAANLGRDALAEIRRRPQSPPGALSTQ DAVQIEISAALRGAHETLDSAQLTQRLAVQQWRDRRMAQALLAAPLPALFITGAFHARRDLGVPLHIEDEEPLTEVCVLI LASPGALVGEVQADYVWYTASARL
Specific function: Unknown
COG id: COG3016
COG function: function code S; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28704; Mature: 28704
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLTLALLALSGCQMSAPVAERIVSLADGQTLTPVQLAQRLASSPRVIVGERHDNPRHQQ CHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHH IARWLLLQMSSLRPQGSVLLEMLTPDQQAGVAAAREPSLSDAQVMALLQWQSGWPWAQYG HHHHHHHHHHHCCCCHHEEEEECCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH PLVRSALRGSYPLLAANLGRDALAEIRRRPQSPPGALSTQDAVQIEISAALRGAHETLDS HHHHHHHCCCCCEEEHHCCHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHH AQLTQRLAVQQWRDRRMAQALLAAPLPALFITGAFHARRDLGVPLHIEDEEPLTEVCVLI HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHH LASPGALVGEVQADYVWYTASARL HCCCCCCEECEECCEEEEEECCCC >Mature Secondary Structure MMLTLALLALSGCQMSAPVAERIVSLADGQTLTPVQLAQRLASSPRVIVGERHDNPRHQQ CHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHH IARWLLLQMSSLRPQGSVLLEMLTPDQQAGVAAAREPSLSDAQVMALLQWQSGWPWAQYG HHHHHHHHHHHCCCCHHEEEEECCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH PLVRSALRGSYPLLAANLGRDALAEIRRRPQSPPGALSTQDAVQIEISAALRGAHETLDS HHHHHHHCCCCCEEEHHCCHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHH AQLTQRLAVQQWRDRRMAQALLAAPLPALFITGAFHARRDLGVPLHIEDEEPLTEVCVLI HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHH LASPGALVGEVQADYVWYTASARL HCCCCCCEECEECCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA