Click here to switch to the map view.

The map label for this gene is nudK [H]

Identifier: 238919161

GI number: 238919161

Start: 1225141

End: 1225728

Strand: Direct

Name: nudK [H]

Synonym: NT01EI_1232

Alternate gene names: 238919161

Gene position: 1225141-1225728 (Clockwise)

Preceding gene: 238919159

Following gene: 238919162

Centisome position: 32.14

GC content: 62.41

Gene sequence:

>588_bases
ATGAACATCCAATTTATCCATGAGCGTTTACTCTCCGACGCCTGGCGACCGCTGCGCGAGTATGAGTATGAGCTGCCGCG
CCGGGAGGGCGGGGTGGTGCGTCAGCGGCGCGAGGTCTATCTGCGCGGCAACGGCGCCACCGTGCTGCTGTATAACCTGT
CGCGCCGCTGCGTACTGTTGATCCGCCAGTTTCGCCTGCCGACCTATCTCAACGGTAACCCGGACGGCATGCTGATCGAG
ACCTGCGCCGGTCTGCTGGACAGCGATGCGCCAGAGGCCTGCGTACGCCGGGAGGCGATGGAGGAGACCGGCTATGCCAT
CGGTGGGGTCAGGCGCCTGTTTTCCGCCTATATGTCGCCGGGCGGTGTGACCGAAATAGTGCATTTCTTTGCGGCGGAGT
ACCGCGAAAGCCTACGCTGCGGCTGCGGTGGCGGCATTGAGGATGAGGATATCGAACTGCTGGAGATCCCGTTTGACGAC
GCCTGGCAGATGGTCTGCGACGGGCGGATCTGCGATGGTAAGACCATCATGCTGCTGCAGCACGCCCGCCTGAGCAACTG
GTTTTGCGATGCGCCCAAGGGCGAATAA

Upstream 100 bases:

>100_bases
CCACCACCACCCTGCACTGTGCCACCTTTGAGGATTGATATTGCTTTCTGTTAGTGGCTATCCTGCAACGGTATGTCGTG
ACATAAGGCAAAGAAAAGAA

Downstream 100 bases:

>100_bases
ATGCGCATCTGAGCGGCGGGCCGTGTTTTCTTTTCGGCTTTATGTCCTGCTTCATAGTTTCGGTGTGCTATGGCACTATA
CTCGTGATTTCACAAAACAT

Product: hydrolase YffH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MNIQFIHERLLSDAWRPLREYEYELPRREGGVVRQRREVYLRGNGATVLLYNLSRRCVLLIRQFRLPTYLNGNPDGMLIE
TCAGLLDSDAPEACVRREAMEETGYAIGGVRRLFSAYMSPGGVTEIVHFFAAEYRESLRCGCGGGIEDEDIELLEIPFDD
AWQMVCDGRICDGKTIMLLQHARLSNWFCDAPKGE

Sequences:

>Translated_195_residues
MNIQFIHERLLSDAWRPLREYEYELPRREGGVVRQRREVYLRGNGATVLLYNLSRRCVLLIRQFRLPTYLNGNPDGMLIE
TCAGLLDSDAPEACVRREAMEETGYAIGGVRRLFSAYMSPGGVTEIVHFFAAEYRESLRCGCGGGIEDEDIELLEIPFDD
AWQMVCDGRICDGKTIMLLQHARLSNWFCDAPKGE
>Mature_195_residues
MNIQFIHERLLSDAWRPLREYEYELPRREGGVVRQRREVYLRGNGATVLLYNLSRRCVLLIRQFRLPTYLNGNPDGMLIE
TCAGLLDSDAPEACVRREAMEETGYAIGGVRRLFSAYMSPGGVTEIVHFFAAEYRESLRCGCGGGIEDEDIELLEIPFDD
AWQMVCDGRICDGKTIMLLQHARLSNWFCDAPKGE

Specific function: Catalyzes the hydrolysis of GDP-mannose [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788810, Length=184, Percent_Identity=56.5217391304348, Blast_Score=235, Evalue=2e-63,
Organism=Escherichia coli, GI1789412, Length=153, Percent_Identity=30.718954248366, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004385
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22244; Mature: 22244

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQFIHERLLSDAWRPLREYEYELPRREGGVVRQRREVYLRGNGATVLLYNLSRRCVLL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEECCCCEEEEEECCHHHHHH
IRQFRLPTYLNGNPDGMLIETCAGLLDSDAPEACVRREAMEETGYAIGGVRRLFSAYMSP
HHHHCCCCEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
GGVTEIVHFFAAEYRESLRCGCGGGIEDEDIELLEIPFDDAWQMVCDGRICDGKTIMLLQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHCCEECCCCEEEEEE
HARLSNWFCDAPKGE
HHHHCCCCCCCCCCC
>Mature Secondary Structure
MNIQFIHERLLSDAWRPLREYEYELPRREGGVVRQRREVYLRGNGATVLLYNLSRRCVLL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEECCCCEEEEEECCHHHHHH
IRQFRLPTYLNGNPDGMLIETCAGLLDSDAPEACVRREAMEETGYAIGGVRRLFSAYMSP
HHHHCCCCEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
GGVTEIVHFFAAEYRESLRCGCGGGIEDEDIELLEIPFDDAWQMVCDGRICDGKTIMLLQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHCCEECCCCEEEEEE
HARLSNWFCDAPKGE
HHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA