Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is phoR [H]

Identifier: 238919114

GI number: 238919114

Start: 1178135

End: 1179046

Strand: Direct

Name: phoR [H]

Synonym: NT01EI_1185

Alternate gene names: 238919114

Gene position: 1178135-1179046 (Clockwise)

Preceding gene: 238919113

Following gene: 238919115

Centisome position: 30.9

GC content: 61.4

Gene sequence:

>912_bases
GTGTTGGATAAACTCTCCTGGAAGACGCTGCTGTCTGAGCTGCTGTTGTGCTGCGTGCCGGCGCTGCTGCTCGGCACGCT
GTTCGGCTATTTACCCTGGTTCTTACTGTCGGCGCTGTGCCTGCTGCTGATGTGGCACGGCTGGAATCAGCTGCGGCTCT
CCCACTGGCTGTGGGTGGATCGCAGCATGACGCCGCCCAGCGGACGCGGCAGCTGGGAGCCGCTGTTTTACGGGTTGTAT
CAGATGCAGCAGCGTAATCGGCGGCGACGGCGTGAGCTGGCCTTGCTGATCAAACGGTTCCGCAGTGGGGCAGAGTCGCT
GCCCGATGCCATTGTGATGCTGACCGATGAGGGCAATATCTTTTGGTGCAACCGTCTGGCGCAGCACCTGCTGGGGTTTC
GCTGGCCCGAGGACAATGGACAGAATATCCGTAATCTGCTGCGTTATCCCGAATTTAGCCGCTATCTGGGCGACGCCGAT
TATACCCGGCCGCTGACACTGCACCTTAACAGCGGGCGCCATATGGAGTTTCGCCTGATGCCCTACAGCGAGGGGCAGAT
GCTGATGGTCGCGTGCGATGTGACCCAAAAGCGCCAGCTTGAGGGCGCGCGGCGCAACTTTTTTGCCAACGTCAGCCATG
AGCTGCGTACGCCGCTGACGGTACTGCAGGGCTATCTGGAGATGTTTGGCGACGATGCGATGCCGGCGCCGCAGCGGGAG
AAGGCGCTGTTGACCATGCAGGCACAGGCGCAGCGTATGGATGGACTGGTCCGGCAGCTGCTGGTGCTGTCGCGGATTGA
GGCGGCGCCAGACATCGATCTCGGCGCGGTGGTTGATGTCCCGGCGATGCTGCATATGCTGGATCGGGAGGCCAACGCGT
TGAGCGATGGTCAGCACAGGCTGCGTTTTTAG

Upstream 100 bases:

>100_bases
AGGCGCTGGAGGGCAGCGGTCACGATCGCATGGTGCAGACCGTGCGTGGTACCGGCTACCGTTTCTCCGCCCGCTACTGA
TCGGCGATGGAGTGCTGACT

Downstream 100 bases:

>100_bases
CATTGATGACACCCTGCGGGTGCGCGGCAATGAGGAGCAGCTGCGCAGCGCTGTCTCCAATCTGGTGTATAACGCGATCA
ACCACACACCGGCGGGAACG

Product: phosphate regulon sensor protein PhoR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MLDKLSWKTLLSELLLCCVPALLLGTLFGYLPWFLLSALCLLLMWHGWNQLRLSHWLWVDRSMTPPSGRGSWEPLFYGLY
QMQQRNRRRRRELALLIKRFRSGAESLPDAIVMLTDEGNIFWCNRLAQHLLGFRWPEDNGQNIRNLLRYPEFSRYLGDAD
YTRPLTLHLNSGRHMEFRLMPYSEGQMLMVACDVTQKRQLEGARRNFFANVSHELRTPLTVLQGYLEMFGDDAMPAPQRE
KALLTMQAQAQRMDGLVRQLLVLSRIEAAPDIDLGAVVDVPAMLHMLDREANALSDGQHRLRF

Sequences:

>Translated_303_residues
MLDKLSWKTLLSELLLCCVPALLLGTLFGYLPWFLLSALCLLLMWHGWNQLRLSHWLWVDRSMTPPSGRGSWEPLFYGLY
QMQQRNRRRRRELALLIKRFRSGAESLPDAIVMLTDEGNIFWCNRLAQHLLGFRWPEDNGQNIRNLLRYPEFSRYLGDAD
YTRPLTLHLNSGRHMEFRLMPYSEGQMLMVACDVTQKRQLEGARRNFFANVSHELRTPLTVLQGYLEMFGDDAMPAPQRE
KALLTMQAQAQRMDGLVRQLLVLSRIEAAPDIDLGAVVDVPAMLHMLDREANALSDGQHRLRF
>Mature_303_residues
MLDKLSWKTLLSELLLCCVPALLLGTLFGYLPWFLLSALCLLLMWHGWNQLRLSHWLWVDRSMTPPSGRGSWEPLFYGLY
QMQQRNRRRRRELALLIKRFRSGAESLPDAIVMLTDEGNIFWCNRLAQHLLGFRWPEDNGQNIRNLLRYPEFSRYLGDAD
YTRPLTLHLNSGRHMEFRLMPYSEGQMLMVACDVTQKRQLEGARRNFFANVSHELRTPLTVLQGYLEMFGDDAMPAPQRE
KALLTMQAQAQRMDGLVRQLLVLSRIEAAPDIDLGAVVDVPAMLHMLDREANALSDGQHRLRF

Specific function: Member of the two-component regulatory system phoR/phoB involved in the phosphate regulon genes expression. PhoR may function as a membrane-associated protein kinase that phosphorylates phoB in response to environmental signals [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1786600, Length=303, Percent_Identity=68.6468646864686, Blast_Score=415, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR021766
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR014310 [H]

Pfam domain/function: PF11808 DUF3329; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 35200; Mature: 35200

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKLSWKTLLSELLLCCVPALLLGTLFGYLPWFLLSALCLLLMWHGWNQLRLSHWLWVD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEC
RSMTPPSGRGSWEPLFYGLYQMQQRNRRRRRELALLIKRFRSGAESLPDAIVMLTDEGNI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCE
FWCNRLAQHLLGFRWPEDNGQNIRNLLRYPEFSRYLGDADYTRPLTLHLNSGRHMEFRLM
EEHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCEEEEECCCCEEEEEEE
PYSEGQMLMVACDVTQKRQLEGARRNFFANVSHELRTPLTVLQGYLEMFGDDAMPAPQRE
ECCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHCCCCCCCCCHH
KALLTMQAQAQRMDGLVRQLLVLSRIEAAPDIDLGAVVDVPAMLHMLDREANALSDGQHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
LRF
CCC
>Mature Secondary Structure
MLDKLSWKTLLSELLLCCVPALLLGTLFGYLPWFLLSALCLLLMWHGWNQLRLSHWLWVD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEC
RSMTPPSGRGSWEPLFYGLYQMQQRNRRRRRELALLIKRFRSGAESLPDAIVMLTDEGNI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCE
FWCNRLAQHLLGFRWPEDNGQNIRNLLRYPEFSRYLGDADYTRPLTLHLNSGRHMEFRLM
EEHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCEEEEECCCCEEEEEEE
PYSEGQMLMVACDVTQKRQLEGARRNFFANVSHELRTPLTVLQGYLEMFGDDAMPAPQRE
ECCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHCCCCCCCCCHH
KALLTMQAQAQRMDGLVRQLLVLSRIEAAPDIDLGAVVDVPAMLHMLDREANALSDGQHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
LRF
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2556368 [H]