Click here to switch to the map view.

The map label for this gene is yaeL [C]

Identifier: 238916791

GI number: 238916791

Start: 864447

End: 865826

Strand: Direct

Name: yaeL [C]

Synonym: EUBELI_00853

Alternate gene names: 238916791

Gene position: 864447-865826 (Clockwise)

Preceding gene: 238916790

Following gene: 238916792

Centisome position: 40.32

GC content: 38.62

Gene sequence:

>1380_bases
TTGGTTCTTAATGTTATTCTGGCGATTCTTGTACTTAGTATAATTGTTATTGTCCATGAATTCGGACATTTTATAATAGC
TAAGGCTAATGGCATAACTGTAGTTGAATTCTCAATCGGATTCGGACCGAAGCTGATACATTTCAGAAAAGGTGAGACGG
AATATTGTATTAAAGCACTTCCTTTTGGTGGTGCATGTACGATGCTTGGTGATGAGTTCCTTGAGATGAGTGTTATACAG
TCAGAAGAAGATGATGACGAAGAGCTTACAGATGAAGAGAAGGAAGCTAAGAAAAGAAAGCTTGCTATTGAAAATGGCTA
TGACATGGAAAAGTCATTTGCAAGCAAATCAGTCTGGGCAAGAATTGCGGTTATAGCAGCAGGACCGGTATTTAATTTCC
TTCTTGCTTTCGTGTGTGCAGTAGTTATTGTCGGAAGTCTTGGCTATGATCCATGTGACATTGATGTTGTTAAAGATAAT
TCGCCAGCCACAGAAGCAGGGCTTCAGGAAGGTGATGTCATAACTAAGGTTAATGGACATAAGGTAACATTTTACAGGGA
TTTTTATTTCTATAGGGCTTATAATGCAGATAAGACTCTTAATATAACATTTACAAGAGACGGTGAAAAGATGACAACAA
CTGTTACTCCGCAGCATATTAAGCAGCAGAAGTATCAGGTTGGAATTATGATGAATGAGAATTGTCTCATAAGTTCTGTT
ACCAAGGATTCTCCGGCTGAAAAGGCGGGACTTAAAGCTAATGATGTTATCAAAGCAGTTGATGGTACTGCAATGGAGAA
TAGTTCAAATGTGACAGAAGCTATTACATCAAGCGGCGGCAATAAGGTTGTATTCACGGTTGCAAGAGATGGAAAAAATG
TTGATGTGACAGTTGAGCCTAAGATGGTTGAAGTTGAAAGCTATGATACAGGCTTTGTTGTATATGGAGACAGGGTAAAG
ACTTCTCCTATTGGCACTCTTAAGTATTCAGTGAAGGAAGTCGGATACAGTGTCAAGACTGTAATTCAGAGCCTTGGTAT
GTTATTTACAGGAAAGATTGGGTTTGATTCATTGTTAGGACCTGTCGGAACTGTCAGCACAATGAGTGAGATTGTTGAAG
AAAGTAAGGCAGATGGTGCATTTTATGTATTCCTTAATCTTATGAATCTTGCAGCACTTATCAGTGCCAACTTAGGAGTA
ATGAATCTGCTGCCAATTCCGGCACTTGACGGAGGCAGACTTGTATTCCTTATAATAGAGGCATTAAGAGGCAAGCCGGT
TAAGAGAGAGCATGAGGGAATTGTTAATTTCATAGGTATGATACTTCTTGTCATACTTATGGTTGTTGTATTGTTTAAAG
ATATAATGGCATTGTTCTAA

Upstream 100 bases:

>100_bases
CGCCATGAATGAAGTGGATTATATCAATAATCCAACAGTAGAGCAGATTCTCTCTACACAGAAGATAGTAACAGACATGA
TAGAAAGCAGGTGGTAGGAG

Downstream 100 bases:

>100_bases
TACAGAAAGGACACAGGGGTTATGTACAGAGATAATACTAAAGTTGTTAAGATAGGAAAATGTGTTATAGGTGGTGGCAA
TCCTATTCTTATCCAGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MVLNVILAILVLSIIVIVHEFGHFIIAKANGITVVEFSIGFGPKLIHFRKGETEYCIKALPFGGACTMLGDEFLEMSVIQ
SEEDDDEELTDEEKEAKKRKLAIENGYDMEKSFASKSVWARIAVIAAGPVFNFLLAFVCAVVIVGSLGYDPCDIDVVKDN
SPATEAGLQEGDVITKVNGHKVTFYRDFYFYRAYNADKTLNITFTRDGEKMTTTVTPQHIKQQKYQVGIMMNENCLISSV
TKDSPAEKAGLKANDVIKAVDGTAMENSSNVTEAITSSGGNKVVFTVARDGKNVDVTVEPKMVEVESYDTGFVVYGDRVK
TSPIGTLKYSVKEVGYSVKTVIQSLGMLFTGKIGFDSLLGPVGTVSTMSEIVEESKADGAFYVFLNLMNLAALISANLGV
MNLLPIPALDGGRLVFLIIEALRGKPVKREHEGIVNFIGMILLVILMVVVLFKDIMALF

Sequences:

>Translated_459_residues
MVLNVILAILVLSIIVIVHEFGHFIIAKANGITVVEFSIGFGPKLIHFRKGETEYCIKALPFGGACTMLGDEFLEMSVIQ
SEEDDDEELTDEEKEAKKRKLAIENGYDMEKSFASKSVWARIAVIAAGPVFNFLLAFVCAVVIVGSLGYDPCDIDVVKDN
SPATEAGLQEGDVITKVNGHKVTFYRDFYFYRAYNADKTLNITFTRDGEKMTTTVTPQHIKQQKYQVGIMMNENCLISSV
TKDSPAEKAGLKANDVIKAVDGTAMENSSNVTEAITSSGGNKVVFTVARDGKNVDVTVEPKMVEVESYDTGFVVYGDRVK
TSPIGTLKYSVKEVGYSVKTVIQSLGMLFTGKIGFDSLLGPVGTVSTMSEIVEESKADGAFYVFLNLMNLAALISANLGV
MNLLPIPALDGGRLVFLIIEALRGKPVKREHEGIVNFIGMILLVILMVVVLFKDIMALF
>Mature_459_residues
MVLNVILAILVLSIIVIVHEFGHFIIAKANGITVVEFSIGFGPKLIHFRKGETEYCIKALPFGGACTMLGDEFLEMSVIQ
SEEDDDEELTDEEKEAKKRKLAIENGYDMEKSFASKSVWARIAVIAAGPVFNFLLAFVCAVVIVGSLGYDPCDIDVVKDN
SPATEAGLQEGDVITKVNGHKVTFYRDFYFYRAYNADKTLNITFTRDGEKMTTTVTPQHIKQQKYQVGIMMNENCLISSV
TKDSPAEKAGLKANDVIKAVDGTAMENSSNVTEAITSSGGNKVVFTVARDGKNVDVTVEPKMVEVESYDTGFVVYGDRVK
TSPIGTLKYSVKEVGYSVKTVIQSLGMLFTGKIGFDSLLGPVGTVSTMSEIVEESKADGAFYVFLNLMNLAALISANLGV
MNLLPIPALDGGRLVFLIIEALRGKPVKREHEGIVNFIGMILLVILMVVVLFKDIMALF

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1786373, Length=488, Percent_Identity=29.3032786885246, Blast_Score=145, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR004387
- InterPro:   IPR008915 [H]

Pfam domain/function: PF00595 PDZ; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 50090; Mature: 50090

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLNVILAILVLSIIVIVHEFGHFIIAKANGITVVEFSIGFGPKLIHFRKGETEYCIKAL
CHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEECCCCCEEEEEECCCHHHHHEEC
PFGGACTMLGDEFLEMSVIQSEEDDDEELTDEEKEAKKRKLAIENGYDMEKSFASKSVWA
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHEECCCCCCHHHHHHHHHHHH
RIAVIAAGPVFNFLLAFVCAVVIVGSLGYDPCDIDVVKDNSPATEAGLQEGDVITKVNGH
EEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHCCCCCCCEEEEECCC
KVTFYRDFYFYRAYNADKTLNITFTRDGEKMTTTVTPQHIKQQKYQVGIMMNENCLISSV
EEEEEEEEEEEEEECCCCEEEEEEEECCCEEEEEECHHHHHCCCEEEEEEECCCEEEEEC
TKDSPAEKAGLKANDVIKAVDGTAMENSSNVTEAITSSGGNKVVFTVARDGKNVDVTVEP
CCCCCHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCEEEEEECC
KMVEVESYDTGFVVYGDRVKTSPIGTLKYSVKEVGYSVKTVIQSLGMLFTGKIGFDSLLG
EEEEEECCCCCEEEECCEEECCCCCHHHHHHHHHCHHHHHHHHHCCHHEECCCCHHHHHC
PVGTVSTMSEIVEESKADGAFYVFLNLMNLAALISANLGVMNLLPIPALDGGRLVFLIIE
CCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHEEHH
ALRGKPVKREHEGIVNFIGMILLVILMVVVLFKDIMALF
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MVLNVILAILVLSIIVIVHEFGHFIIAKANGITVVEFSIGFGPKLIHFRKGETEYCIKAL
CHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEECCCCCEEEEEECCCHHHHHEEC
PFGGACTMLGDEFLEMSVIQSEEDDDEELTDEEKEAKKRKLAIENGYDMEKSFASKSVWA
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHEECCCCCCHHHHHHHHHHHH
RIAVIAAGPVFNFLLAFVCAVVIVGSLGYDPCDIDVVKDNSPATEAGLQEGDVITKVNGH
EEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHCCCCCCCEEEEECCC
KVTFYRDFYFYRAYNADKTLNITFTRDGEKMTTTVTPQHIKQQKYQVGIMMNENCLISSV
EEEEEEEEEEEEEECCCCEEEEEEEECCCEEEEEECHHHHHCCCEEEEEEECCCEEEEEC
TKDSPAEKAGLKANDVIKAVDGTAMENSSNVTEAITSSGGNKVVFTVARDGKNVDVTVEP
CCCCCHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCEEEEEECC
KMVEVESYDTGFVVYGDRVKTSPIGTLKYSVKEVGYSVKTVIQSLGMLFTGKIGFDSLLG
EEEEEECCCCCEEEECCEEECCCCCHHHHHHHHHCHHHHHHHHHCCHHEECCCCHHHHHC
PVGTVSTMSEIVEESKADGAFYVFLNLMNLAALISANLGVMNLLPIPALDGGRLVFLIIE
CCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHEEHH
ALRGKPVKREHEGIVNFIGMILLVILMVVVLFKDIMALF
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]