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The map label for this gene is frr [H]

Identifier: 238916787

GI number: 238916787

Start: 861107

End: 861670

Strand: Direct

Name: frr [H]

Synonym: EUBELI_00849

Alternate gene names: 238916787

Gene position: 861107-861670 (Clockwise)

Preceding gene: 238916786

Following gene: 238916788

Centisome position: 40.16

GC content: 35.82

Gene sequence:

>564_bases
ATGGAGGATTTTATGGAAAATATTAAAGATATTGAAGGAAGAATGCAGAAGTCAGTTGACAACTTAAAGGAAGAATATGT
AACAATAAGAGCCGGAAGAGCTAATCCACATATTCTTGACAGATTAAGAGTTGATTATTATGGAACACCTACACCAATCC
AGCAGGTTGCCAATGTTTCTGTACCAGAAGCAAGAATGATTCAGATTCAGCCTTGGGAAGCAAGCCTTATTAAGGATATT
GAGAAAGCAATTCTTGTTTCAGATTTAGGACTTACACCTAACAATGATGGTAAGACAATCAGACTTGTGTTCCCTGAATT
AACAGAAGACAGAAGAAAAGAACTTGCTAAGGATATCAAGAAGAAGGGTGATAATGCCAAGGTTGCTATCCGTAATATCA
GAAGAGATGCCAACGATGCAATAAAGAAAGAGAACAAGGCAGGAGATATCTCTGATGATGAAGCTAAGAATTCAGAGGAT
GAAATTCAGAAGATTACTGATAAGTATATTGCTATGATTGATAGTGCTATAGACGATAAGACAAAAGAGATACTTACAGT
TTAA

Upstream 100 bases:

>100_bases
CCTCTTATGGTATTCGGACTCGAAGAAGAGAACAGCATAGTTAATGCTTTATCAGGAAAGTTTAATGGAACAGTAGTAAC
TGTTGATTAATATAATATTA

Downstream 100 bases:

>100_bases
GAAAATGTCAGGGCTGTTGGATATTTTACAACAGCCTTTTTGTAATTGAATGAATTGCGAGAGGAATCATAGATATGGAT
ACATTTAACGAGAGTCTCGG

Product: ribosome recycling factor

Products: NA

Alternate protein names: RRF; Ribosome-releasing factor [H]

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MEDFMENIKDIEGRMQKSVDNLKEEYVTIRAGRANPHILDRLRVDYYGTPTPIQQVANVSVPEARMIQIQPWEASLIKDI
EKAILVSDLGLTPNNDGKTIRLVFPELTEDRRKELAKDIKKKGDNAKVAIRNIRRDANDAIKKENKAGDISDDEAKNSED
EIQKITDKYIAMIDSAIDDKTKEILTV

Sequences:

>Translated_187_residues
MEDFMENIKDIEGRMQKSVDNLKEEYVTIRAGRANPHILDRLRVDYYGTPTPIQQVANVSVPEARMIQIQPWEASLIKDI
EKAILVSDLGLTPNNDGKTIRLVFPELTEDRRKELAKDIKKKGDNAKVAIRNIRRDANDAIKKENKAGDISDDEAKNSED
EIQKITDKYIAMIDSAIDDKTKEILTV
>Mature_187_residues
MEDFMENIKDIEGRMQKSVDNLKEEYVTIRAGRANPHILDRLRVDYYGTPTPIQQVANVSVPEARMIQIQPWEASLIKDI
EKAILVSDLGLTPNNDGKTIRLVFPELTEDRRKELAKDIKKKGDNAKVAIRNIRRDANDAIKKENKAGDISDDEAKNSED
EIQKITDKYIAMIDSAIDDKTKEILTV

Specific function: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another [H]

COG id: COG0233

COG function: function code J; Ribosome recycling factor

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RRF family [H]

Homologues:

Organism=Escherichia coli, GI1786368, Length=177, Percent_Identity=46.3276836158192, Blast_Score=167, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24661488, Length=181, Percent_Identity=28.7292817679558, Blast_Score=77, Evalue=8e-15,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002661
- InterPro:   IPR015998 [H]

Pfam domain/function: PF01765 RRF [H]

EC number: NA

Molecular weight: Translated: 21279; Mature: 21279

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDFMENIKDIEGRMQKSVDNLKEEYVTIRAGRANPHILDRLRVDYYGTPTPIQQVANVS
CHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHCCC
VPEARMIQIQPWEASLIKDIEKAILVSDLGLTPNNDGKTIRLVFPELTEDRRKELAKDIK
CCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
KKGDNAKVAIRNIRRDANDAIKKENKAGDISDDEAKNSEDEIQKITDKYIAMIDSAIDDK
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TKEILTV
HHHHHCC
>Mature Secondary Structure
MEDFMENIKDIEGRMQKSVDNLKEEYVTIRAGRANPHILDRLRVDYYGTPTPIQQVANVS
CHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHCCC
VPEARMIQIQPWEASLIKDIEKAILVSDLGLTPNNDGKTIRLVFPELTEDRRKELAKDIK
CCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
KKGDNAKVAIRNIRRDANDAIKKENKAGDISDDEAKNSEDEIQKITDKYIAMIDSAIDDK
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TKEILTV
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA