| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is hemA [H]
Identifier: 238916685
GI number: 238916685
Start: 757313
End: 758530
Strand: Direct
Name: hemA [H]
Synonym: EUBELI_00747
Alternate gene names: 238916685
Gene position: 757313-758530 (Clockwise)
Preceding gene: 238916684
Following gene: 238916686
Centisome position: 35.32
GC content: 40.07
Gene sequence:
>1218_bases ATGCAGTTAGGATATGTAGGAATTAATTATAAGAATACAGACCTTTCAGTAAGGGACAAGATTACATTCACAGACAGCGG GATAGCAGACTTTATGCAACAGGCAGAGGAAGCAGGTGTGAAACAGTGCATGTGCCTTTCAACATGCAACAGATGCGAAG TGTTTTATTTGTATGAGGATGAAACATTTGTACAAGTAATGTCCGATTTATTCAATGATTATTTTGGACTTACTGATACT AAATTAGCCGGTGTCAAATGTGGTGAAGAAGCACTGGTATATCTGTTTTGCATAGCCGCCGGACTTGAAAGCATGGTGCT TGGAGAGGATCAGATACTAGGCCAGTTAAAGGATGCGGCAGACCTTTCAAGAACGCTTGGACACAGCGGGAAAGAACTTA ATTATATAGTAAGAGAAGCGGTAAGCTGTGCAAAGCGGATTAAGACAGAGTACAAGGTAAGTGAAAAACCAGTATCTGTA TGCTATGTCGGTATTCAGGAGTTAGACAGAGTATGTGGTATATCAGGAAAGCACGCGCTTGTTATAGGAAGCGGCAAAAC AGCAGCTCTTGCCATAAGATATCTGGCAGAATATGGCGCTGATGTAACAGTGTGTTCAAGAACTTATCAGCATGCGAAGG CGTTGCTTAAGGAGTTTTCACAGATTGAGGTTATTGCATATGATAAGAAAACAGAAGCACTTAAAAGCAGTGATATAGTT GTCTCAGCGACTTCATCACCTCATCTGGTGATTAAATGTGCTGAATTATCAGGGGGTAAAAAGATGACACTTCTTGATCT TGCTGCACCAAGAGATATAGAAAAATCGGCAGGTGACATTTTTGGAGTTACTCTTATTGACCTTGACAGGATAGGTGGGA TTGTGAAGTCTAATCAGAATGAGAGGGCACATTTGTTAAAAGAAAGCCAGTGCGTGATTGATGAATATATAGCGGAAACA AAGAAATGGCTCACATCAAGCAGAATGGATACAACTATCCAGTCGCTTGGCAAAAAATGTGATGAGATAGTACAGGATAG CTATGATTATCTTAACCGCAAGATTGACCTTTCAGACCATGACAGGGTAATCTTAAAGAAGATTCTTAAGTCGTCATTAC ACAGATTGTTAAAAGAACCGATTGAAGAATTGAAAAATGTGGAAGAAAATGAACAGCAGCAGTATAAAGACATGGTGGAG AGACTGTTTGGCTTGTAG
Upstream 100 bases:
>100_bases GTTCGTATCAGACGCACACACTAATGAGGATATCAACCGTACAATAGAGGTTATGGAAGAATTCTTCAGGAAATAATTCG GATAATAAGTGGGAATACAG
Downstream 100 bases:
>100_bases GGAGGATTATGCATTACAGAATAGGAACGAGAGGTTCGAAGCTGGCACTTGTCCAGTCGGAATATGTTAAGAGAAGAATG GAAGAGGCGTATCCTGAGGA
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR [H]
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MQLGYVGINYKNTDLSVRDKITFTDSGIADFMQQAEEAGVKQCMCLSTCNRCEVFYLYEDETFVQVMSDLFNDYFGLTDT KLAGVKCGEEALVYLFCIAAGLESMVLGEDQILGQLKDAADLSRTLGHSGKELNYIVREAVSCAKRIKTEYKVSEKPVSV CYVGIQELDRVCGISGKHALVIGSGKTAALAIRYLAEYGADVTVCSRTYQHAKALLKEFSQIEVIAYDKKTEALKSSDIV VSATSSPHLVIKCAELSGGKKMTLLDLAAPRDIEKSAGDIFGVTLIDLDRIGGIVKSNQNERAHLLKESQCVIDEYIAET KKWLTSSRMDTTIQSLGKKCDEIVQDSYDYLNRKIDLSDHDRVILKKILKSSLHRLLKEPIEELKNVEENEQQQYKDMVE RLFGL
Sequences:
>Translated_405_residues MQLGYVGINYKNTDLSVRDKITFTDSGIADFMQQAEEAGVKQCMCLSTCNRCEVFYLYEDETFVQVMSDLFNDYFGLTDT KLAGVKCGEEALVYLFCIAAGLESMVLGEDQILGQLKDAADLSRTLGHSGKELNYIVREAVSCAKRIKTEYKVSEKPVSV CYVGIQELDRVCGISGKHALVIGSGKTAALAIRYLAEYGADVTVCSRTYQHAKALLKEFSQIEVIAYDKKTEALKSSDIV VSATSSPHLVIKCAELSGGKKMTLLDLAAPRDIEKSAGDIFGVTLIDLDRIGGIVKSNQNERAHLLKESQCVIDEYIAET KKWLTSSRMDTTIQSLGKKCDEIVQDSYDYLNRKIDLSDHDRVILKKILKSSLHRLLKEPIEELKNVEENEQQQYKDMVE RLFGL >Mature_405_residues MQLGYVGINYKNTDLSVRDKITFTDSGIADFMQQAEEAGVKQCMCLSTCNRCEVFYLYEDETFVQVMSDLFNDYFGLTDT KLAGVKCGEEALVYLFCIAAGLESMVLGEDQILGQLKDAADLSRTLGHSGKELNYIVREAVSCAKRIKTEYKVSEKPVSV CYVGIQELDRVCGISGKHALVIGSGKTAALAIRYLAEYGADVTVCSRTYQHAKALLKEFSQIEVIAYDKKTEALKSSDIV VSATSSPHLVIKCAELSGGKKMTLLDLAAPRDIEKSAGDIFGVTLIDLDRIGGIVKSNQNERAHLLKESQCVIDEYIAET KKWLTSSRMDTTIQSLGKKCDEIVQDSYDYLNRKIDLSDHDRVILKKILKSSLHRLLKEPIEELKNVEENEQQQYKDMVE RLFGL
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) [H]
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family [H]
Homologues:
Organism=Escherichia coli, GI1787461, Length=365, Percent_Identity=28.4931506849315, Blast_Score=141, Evalue=9e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 [H]
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH [H]
EC number: =1.2.1.70 [H]
Molecular weight: Translated: 45192; Mature: 45192
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00747 GLUTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLGYVGINYKNTDLSVRDKITFTDSGIADFMQQAEEAGVKQCMCLSTCNRCEVFYLYED CCEEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC ETFVQVMSDLFNDYFGLTDTKLAGVKCGEEALVYLFCIAAGLESMVLGEDQILGQLKDAA CHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH DLSRTLGHSGKELNYIVREAVSCAKRIKTEYKVSEKPVSVCYVGIQELDRVCGISGKHAL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEE VIGSGKTAALAIRYLAEYGADVTVCSRTYQHAKALLKEFSQIEVIAYDKKTEALKSSDIV EEECCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHCCCCEE VSATSSPHLVIKCAELSGGKKMTLLDLAAPRDIEKSAGDIFGVTLIDLDRIGGIVKSNQN EEECCCCEEEEEEEECCCCCEEEEEECCCCCCHHHCCCCEEEEHEEEHHHHCHHHCCCCC ERAHLLKESQCVIDEYIAETKKWLTSSRMDTTIQSLGKKCDEIVQDSYDYLNRKIDLSDH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DRVILKKILKSSLHRLLKEPIEELKNVEENEQQQYKDMVERLFGL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MQLGYVGINYKNTDLSVRDKITFTDSGIADFMQQAEEAGVKQCMCLSTCNRCEVFYLYED CCEEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC ETFVQVMSDLFNDYFGLTDTKLAGVKCGEEALVYLFCIAAGLESMVLGEDQILGQLKDAA CHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH DLSRTLGHSGKELNYIVREAVSCAKRIKTEYKVSEKPVSVCYVGIQELDRVCGISGKHAL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEE VIGSGKTAALAIRYLAEYGADVTVCSRTYQHAKALLKEFSQIEVIAYDKKTEALKSSDIV EEECCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHCCCCEE VSATSSPHLVIKCAELSGGKKMTLLDLAAPRDIEKSAGDIFGVTLIDLDRIGGIVKSNQN EEECCCCEEEEEEEECCCCCEEEEEECCCCCCHHHCCCCEEEEHEEEHHHHCHHHCCCCC ERAHLLKESQCVIDEYIAETKKWLTSSRMDTTIQSLGKKCDEIVQDSYDYLNRKIDLSDH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DRVILKKILKSSLHRLLKEPIEELKNVEENEQQQYKDMVERLFGL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA