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The map label for this gene is yohJ [C]

Identifier: 238916382

GI number: 238916382

Start: 448630

End: 449025

Strand: Direct

Name: yohJ [C]

Synonym: EUBELI_00436

Alternate gene names: 238916382

Gene position: 448630-449025 (Clockwise)

Preceding gene: 238916381

Following gene: 238916383

Centisome position: 20.92

GC content: 40.66

Gene sequence:

>396_bases
ATGAAATTATTGAGACAGTTTCTTATAATACTGGCTATTTCATTTGTCGGAGAAGCACTTAAATATCTGCTTCCGCTGCC
GGTTCCAGCCAGTATATATGGAATGGTGATACTTTTTGTTGGACTTCTTACCGGACTTATAAAGCTTAGCTGGGTAAAAG
ACGCAGGAAAATTTCTTATAGCTGTAATGCCTGTTATGTTCATTCCGGCAGGAGTAGGACTGATGTCTTCATGGGGGGTA
TTAAAACCTATGCTCGTGCCGGTGCTTGTTGTTACGGTTGTTGCTATAATTACGGTTATGGCGGTTACAGGTCAGGCTTC
ACAGATAATCATACGTGCTGACAGGAAGAGAGAATTACGCAAAGCACAAAGAAATGAGGTTAATACTAATGAATGA

Upstream 100 bases:

>100_bases
AAAAAGTCCTTGCTTTATTGTACATAAGAATGTATTATAATTTGCGGTATGAATTGGTAGCACCAATTTATACCGCAAAT
TTTTATTATGGAGAAATGTT

Downstream 100 bases:

>100_bases
TTTTTTCAGAGAATCACTTTTTGCCGGAGTCACATTAAGTCTTTTATCATACTTTATTGGTTCTGTGCTTAAGAAAAAAT
TTAAGCTTGGAATATTCAAT

Product: holin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MKLLRQFLIILAISFVGEALKYLLPLPVPASIYGMVILFVGLLTGLIKLSWVKDAGKFLIAVMPVMFIPAGVGLMSSWGV
LKPMLVPVLVVTVVAIITVMAVTGQASQIIIRADRKRELRKAQRNEVNTNE

Sequences:

>Translated_131_residues
MKLLRQFLIILAISFVGEALKYLLPLPVPASIYGMVILFVGLLTGLIKLSWVKDAGKFLIAVMPVMFIPAGVGLMSSWGV
LKPMLVPVLVVTVVAIITVMAVTGQASQIIIRADRKRELRKAQRNEVNTNE
>Mature_131_residues
MKLLRQFLIILAISFVGEALKYLLPLPVPASIYGMVILFVGLLTGLIKLSWVKDAGKFLIAVMPVMFIPAGVGLMSSWGV
LKPMLVPVLVVTVVAIITVMAVTGQASQIIIRADRKRELRKAQRNEVNTNE

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

Organism=Escherichia coli, GI1788463, Length=124, Percent_Identity=33.8709677419355, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 14344; Mature: 14344

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLRQFLIILAISFVGEALKYLLPLPVPASIYGMVILFVGLLTGLIKLSWVKDAGKFLI
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVMPVMFIPAGVGLMSSWGVLKPMLVPVLVVTVVAIITVMAVTGQASQIIIRADRKRELR
HHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHH
KAQRNEVNTNE
HHHHCCCCCCC
>Mature Secondary Structure
MKLLRQFLIILAISFVGEALKYLLPLPVPASIYGMVILFVGLLTGLIKLSWVKDAGKFLI
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVMPVMFIPAGVGLMSSWGVLKPMLVPVLVVTVVAIITVMAVTGQASQIIIRADRKRELR
HHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHH
KAQRNEVNTNE
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA