| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is 238916303
Identifier: 238916303
GI number: 238916303
Start: 359000
End: 361882
Strand: Direct
Name: 238916303
Synonym: EUBELI_00337
Alternate gene names: NA
Gene position: 359000-361882 (Clockwise)
Preceding gene: 238916300
Following gene: 238916304
Centisome position: 16.74
GC content: 38.4
Gene sequence:
>2883_bases ATGATACGAAGAAACAAAATTATTGCTTCTGTTGCCGTCAGTGTTATGACCGGCGTTCTTGTTGCAGGTAACTTAGTTCC ATTACAGGGATATTATGCATTTGCACAGGAAACAGGAGTAACAGCTATGAGATATTCAGCAGTAAAAGACATTAACAAAA CATTAGAAGGTTACACACCAATCGACAGTTCTGATCCGGTTGAATTCGGTGGAACTTACATTAAGTATCAGGGTGAGACA ATCCAGTTGTCGGAGACAGCCATATATCTTGATGGTTCGTTATCAGACGAGCTTGCTGCCCAGTACCCATATGTATATAA CGACATTACTAAGGCATTGTCAGCAGACGCATTAAAAAATGGAACAGCAGATAATCCAATGACAGTATATGTTGCACCAT ATGTATACTGGATAGATGATCCGGCAGCAACAGATACAGTACAAAAGACAGAAGGATATTCAGTACCTTATGGAATGGTT GTTAATTCAGATTATCTTACTATCAAAGGTCTTACAGGAAATCCTGATAATGTTGTATTAGCTGGAAACAGAGGACAGTC ACATGCCTCTAACGGTAACTATACCATGTTCAGATTCAACTGCAGTGGCGCACTCACAGTTAAGAATATAACAATAGGTA ATTATTGTAGTGTTGACCTTGATTATCCACTTATGAGTGAACTTAATCAGGCAAAGAGAACAGATACAATCACTCAGGCA CAGCTTGCTGATATGTCTGGTGACAAAATGTTTGCAGATAATTGTAACTTTATAAGCAGACTTAACCTTGTTCCAATCAG TGGTGCTTTAAGAAATCTTTACAATAACTGTCATTTTGAAAGTACCGATGATGCTCTTAATGGAAATGCTGTATATGTAG GATGTGATTTTGATTTCTATGGAAACAGACCATTATATTCATCTTATAATACTGGTTCAACATTCTTAGGCTGTACATTT AATTGTAAGATATTAAATGTAGAAGCAGAACCAACACAGTTCTTTACTAAGGAAGGCGGTACAATAACTGCAGTAGACTG TGTATATAACAGTAATTTAAGTGTGCCTATAACAATGGGATGGACAAAATTCCCATCTGATTCATTAAAATGTTACCAGA GTAACATCATACATAATGGAAAGAATATCACAATAGGCGGAGAAGGTGCTAAAGAAACCGTTGATATGACAGGAAAATCA GTGCTTAATGCCTACAAGGTAGTATCAGGTGGTAAAACATATTACAATACATATAATCTTTTAAAGGGCAGTGACGACTG GGATCCATTAGGAGTTAAAGATGTAATAGCTGCAGCAGGGCAGGAAGCAATTGCAACACAGCTTACAATAAAATCAGATG TTTCAGAGATTGAATCTGGAAAAGAAACAGCTTCAGTTGGAGGAACAGTTAACTATTTCTATGGAACTAATGATACAACA CAGAAGATAACATACAGCGTATCAGACGAAGATAAGGCATATGTGAAGTTAACAGATAATGGTGACGGAACATGCAAAGT AGAAGGTACTAATAATGATGATGCAGCTAAGAAGGTTATTATAAATGCATCTACAGAGTCAGGTCTTGAAGCAGCAGTTG GAATTACTGTAAAGCCAAGCAAACTTGATGCACCAGAGTATATCAAGACACCAGTTATTACTAATGATGGACAGGGTAGT CTTAAAGTAGATTACTCACTTGATTTAGGAAGCAGAGAAGACATGTCTGCAATCTCATGGTACAGATGTACAGATGCAGA GGGAAGTAATAAGGTACTTGTAGCAGTAACGAGAAACGATTCACCAGAATATACATATAAGTTAACAGCAGGTGATGTTG GATATTACATCATGGCTAAGGTAGAATCTAAGAACATCAGAAGTGATTATGGAACACCAGTAAATACAGTATATGACAAG GCAATCGGAGTGAAAGATGTAAGAAGCAAGAACCTTTCTACAGATTTCTCTAACTTCCCTAATATAAAGCAGTCAGAAAT CAAAGCTGGCTTCTGGACAGTAGATTATAACCGTCCGGCAGATACAGAAAGCTTTGGAAAATGGCAGGGAGCAGATACAG AAGAGCCATGGGTATACGGAGTAACAGGTAATGGCTGTGTAGGAGCAGGATTATATCAGGGAACACAGGGTTCAAGACTT ATGTATACACCAGTAGAAGGAACATATGGTGATATGTCACTTAAGCTTGTAGTTGACCCGGCTAAGACAGCAGGTCAGGG ATTTGGTAGTGCAGGACAGTATATGGATGTACTTCTTAAGTTCGATACATCAACACTTACAGGATACGGATTAAGAATAA TAAGAACTAAAGCGTCATCTAATGCTGTAACATTTGTACTTGTAAAATATGACAATGGAGCAGTAACAGAAATCTCTGAT GAAGTAATTGCAAGCTGCTATGTAACAGGATGTACAATTAGTTTAAAGACTGAAGGTAATAAGCTCACTGCTCATGTTGA GACACCAACAGAACAGCTCGCAGATCAGGCAGCTAAGGGATATCCTCATGTAGTTGACCTTACAGCAGATATCGCAGCTA ACAGCTTTGGTGGTGTTGCAATACAGCATACAGGAACAACAGGAACTGGTGGATGGCAGAATACAACAATGCTTCATAAT TTAGATATTACATGGGAAGGTGAGAACAACCAGAACCCAGAATATGTTGAAGAAAATCCATCAGATAACGAGAATCCTGC CGAGACACCAGATGATTCAACAGGAACTTCAACAGGAGCAGATACAACAGTTAATACAGGCGATATGAGCCATGCAGGAA TGTATGCCGCATTAACTACAGCAAGCCTTTGTGCATTGCTTGGAATGGCAGCAGTATACATGAGAAGAAGAAAAGATATC TAA
Upstream 100 bases:
>100_bases AGAAGATTTCGTGCTGTTTTTTTGTATATATAAAAATACAATGTGAATATAATGGAAGCATCTTAAGAAGCAGAAACAAT TTAATATAAGGAGGAATAAT
Downstream 100 bases:
>100_bases TTTCATAAGAATTTTCTTTACAGGAGCACCCGCAATTATATTGCGGGTGTTTTTGCGTGGTGAATGTGTGACCGTATGTG ATTGACATTTTAATTATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 960; Mature: 960
Protein sequence:
>960_residues MIRRNKIIASVAVSVMTGVLVAGNLVPLQGYYAFAQETGVTAMRYSAVKDINKTLEGYTPIDSSDPVEFGGTYIKYQGET IQLSETAIYLDGSLSDELAAQYPYVYNDITKALSADALKNGTADNPMTVYVAPYVYWIDDPAATDTVQKTEGYSVPYGMV VNSDYLTIKGLTGNPDNVVLAGNRGQSHASNGNYTMFRFNCSGALTVKNITIGNYCSVDLDYPLMSELNQAKRTDTITQA QLADMSGDKMFADNCNFISRLNLVPISGALRNLYNNCHFESTDDALNGNAVYVGCDFDFYGNRPLYSSYNTGSTFLGCTF NCKILNVEAEPTQFFTKEGGTITAVDCVYNSNLSVPITMGWTKFPSDSLKCYQSNIIHNGKNITIGGEGAKETVDMTGKS VLNAYKVVSGGKTYYNTYNLLKGSDDWDPLGVKDVIAAAGQEAIATQLTIKSDVSEIESGKETASVGGTVNYFYGTNDTT QKITYSVSDEDKAYVKLTDNGDGTCKVEGTNNDDAAKKVIINASTESGLEAAVGITVKPSKLDAPEYIKTPVITNDGQGS LKVDYSLDLGSREDMSAISWYRCTDAEGSNKVLVAVTRNDSPEYTYKLTAGDVGYYIMAKVESKNIRSDYGTPVNTVYDK AIGVKDVRSKNLSTDFSNFPNIKQSEIKAGFWTVDYNRPADTESFGKWQGADTEEPWVYGVTGNGCVGAGLYQGTQGSRL MYTPVEGTYGDMSLKLVVDPAKTAGQGFGSAGQYMDVLLKFDTSTLTGYGLRIIRTKASSNAVTFVLVKYDNGAVTEISD EVIASCYVTGCTISLKTEGNKLTAHVETPTEQLADQAAKGYPHVVDLTADIAANSFGGVAIQHTGTTGTGGWQNTTMLHN LDITWEGENNQNPEYVEENPSDNENPAETPDDSTGTSTGADTTVNTGDMSHAGMYAALTTASLCALLGMAAVYMRRRKDI
Sequences:
>Translated_960_residues MIRRNKIIASVAVSVMTGVLVAGNLVPLQGYYAFAQETGVTAMRYSAVKDINKTLEGYTPIDSSDPVEFGGTYIKYQGET IQLSETAIYLDGSLSDELAAQYPYVYNDITKALSADALKNGTADNPMTVYVAPYVYWIDDPAATDTVQKTEGYSVPYGMV VNSDYLTIKGLTGNPDNVVLAGNRGQSHASNGNYTMFRFNCSGALTVKNITIGNYCSVDLDYPLMSELNQAKRTDTITQA QLADMSGDKMFADNCNFISRLNLVPISGALRNLYNNCHFESTDDALNGNAVYVGCDFDFYGNRPLYSSYNTGSTFLGCTF NCKILNVEAEPTQFFTKEGGTITAVDCVYNSNLSVPITMGWTKFPSDSLKCYQSNIIHNGKNITIGGEGAKETVDMTGKS VLNAYKVVSGGKTYYNTYNLLKGSDDWDPLGVKDVIAAAGQEAIATQLTIKSDVSEIESGKETASVGGTVNYFYGTNDTT QKITYSVSDEDKAYVKLTDNGDGTCKVEGTNNDDAAKKVIINASTESGLEAAVGITVKPSKLDAPEYIKTPVITNDGQGS LKVDYSLDLGSREDMSAISWYRCTDAEGSNKVLVAVTRNDSPEYTYKLTAGDVGYYIMAKVESKNIRSDYGTPVNTVYDK AIGVKDVRSKNLSTDFSNFPNIKQSEIKAGFWTVDYNRPADTESFGKWQGADTEEPWVYGVTGNGCVGAGLYQGTQGSRL MYTPVEGTYGDMSLKLVVDPAKTAGQGFGSAGQYMDVLLKFDTSTLTGYGLRIIRTKASSNAVTFVLVKYDNGAVTEISD EVIASCYVTGCTISLKTEGNKLTAHVETPTEQLADQAAKGYPHVVDLTADIAANSFGGVAIQHTGTTGTGGWQNTTMLHN LDITWEGENNQNPEYVEENPSDNENPAETPDDSTGTSTGADTTVNTGDMSHAGMYAALTTASLCALLGMAAVYMRRRKDI >Mature_960_residues MIRRNKIIASVAVSVMTGVLVAGNLVPLQGYYAFAQETGVTAMRYSAVKDINKTLEGYTPIDSSDPVEFGGTYIKYQGET IQLSETAIYLDGSLSDELAAQYPYVYNDITKALSADALKNGTADNPMTVYVAPYVYWIDDPAATDTVQKTEGYSVPYGMV VNSDYLTIKGLTGNPDNVVLAGNRGQSHASNGNYTMFRFNCSGALTVKNITIGNYCSVDLDYPLMSELNQAKRTDTITQA QLADMSGDKMFADNCNFISRLNLVPISGALRNLYNNCHFESTDDALNGNAVYVGCDFDFYGNRPLYSSYNTGSTFLGCTF NCKILNVEAEPTQFFTKEGGTITAVDCVYNSNLSVPITMGWTKFPSDSLKCYQSNIIHNGKNITIGGEGAKETVDMTGKS VLNAYKVVSGGKTYYNTYNLLKGSDDWDPLGVKDVIAAAGQEAIATQLTIKSDVSEIESGKETASVGGTVNYFYGTNDTT QKITYSVSDEDKAYVKLTDNGDGTCKVEGTNNDDAAKKVIINASTESGLEAAVGITVKPSKLDAPEYIKTPVITNDGQGS LKVDYSLDLGSREDMSAISWYRCTDAEGSNKVLVAVTRNDSPEYTYKLTAGDVGYYIMAKVESKNIRSDYGTPVNTVYDK AIGVKDVRSKNLSTDFSNFPNIKQSEIKAGFWTVDYNRPADTESFGKWQGADTEEPWVYGVTGNGCVGAGLYQGTQGSRL MYTPVEGTYGDMSLKLVVDPAKTAGQGFGSAGQYMDVLLKFDTSTLTGYGLRIIRTKASSNAVTFVLVKYDNGAVTEISD EVIASCYVTGCTISLKTEGNKLTAHVETPTEQLADQAAKGYPHVVDLTADIAANSFGGVAIQHTGTTGTGGWQNTTMLHN LDITWEGENNQNPEYVEENPSDNENPAETPDDSTGTSTGADTTVNTGDMSHAGMYAALTTASLCALLGMAAVYMRRRKDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103459; Mature: 103459
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRNKIIASVAVSVMTGVLVAGNLVPLQGYYAFAQETGVTAMRYSAVKDINKTLEGYTP CCCCHHHHHHHHHHHHHHHHHCCCEEEECCEEEEHHHCCCCHHHHHHHHHHHHHHCCCCC IDSSDPVEFGGTYIKYQGETIQLSETAIYLDGSLSDELAAQYPYVYNDITKALSADALKN CCCCCCCCCCCEEEEEECCEEEEEEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHCC GTADNPMTVYVAPYVYWIDDPAATDTVQKTEGYSVPYGMVVNSDYLTIKGLTGNPDNVVL CCCCCCEEEEEEEEEEECCCCCCCCCHHHCCCCCCCEEEEEECCEEEEEECCCCCCCEEE AGNRGQSHASNGNYTMFRFNCSGALTVKNITIGNYCSVDLDYPLMSELNQAKRTDTITQA ECCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCEEEEEECCHHHHHHHHHHHCCCHHHH QLADMSGDKMFADNCNFISRLNLVPISGALRNLYNNCHFESTDDALNGNAVYVGCDFDFY HHHCCCCCEEEECCCCEEHEEEEEECHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC GNRPLYSSYNTGSTFLGCTFNCKILNVEAEPTQFFTKEGGTITAVDCVYNSNLSVPITMG CCCCEECCCCCCCEEEEEEEEEEEEEECCCCCHHEECCCCEEEEEEEEECCCCCEEEEEC WTKFPSDSLKCYQSNIIHNGKNITIGGEGAKETVDMTGKSVLNAYKVVSGGKTYYNTYNL CCCCCCHHHHHHHHHHEECCCEEEECCCCCCHHHHHCHHHHHHHHHHCCCCCEEEEEEEE LKGSDDWDPLGVKDVIAAAGQEAIATQLTIKSDVSEIESGKETASVGGTVNYFYGTNDTT ECCCCCCCCCCHHHHHHHCCCCHHEEEEEEHHHHHHHHCCCCCCCCCCEEEEEECCCCCC QKITYSVSDEDKAYVKLTDNGDGTCKVEGTNNDDAAKKVIINASTESGLEAAVGITVKPS EEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEECCC KLDAPEYIKTPVITNDGQGSLKVDYSLDLGSREDMSAISWYRCTDAEGSNKVLVAVTRND CCCCCHHHCCCEEECCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEECCC SPEYTYKLTAGDVGYYIMAKVESKNIRSDYGTPVNTVYDKAIGVKDVRSKNLSTDFSNFP CCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCHHCCC NIKQSEIKAGFWTVDYNRPADTESFGKWQGADTEEPWVYGVTGNGCVGAGLYQGTQGSRL CCCHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCEECCCCCCEE MYTPVEGTYGDMSLKLVVDPAKTAGQGFGSAGQYMDVLLKFDTSTLTGYGLRIIRTKASS EEECCCCCCCCEEEEEEECCCHHCCCCCCCCCCEEEEEEEECCCEECCCCEEEEEEECCC NAVTFVLVKYDNGAVTEISDEVIASCYVTGCTISLKTEGNKLTAHVETPTEQLADQAAKG CEEEEEEEEECCCCEEHHHHHHHHEEEEEEEEEEEEECCCEEEEEECCCHHHHHHHHHCC YPHVVDLTADIAANSFGGVAIQHTGTTGTGGWQNTTMLHNLDITWEGENNQNPEYVEENP CCEEEEEEEHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC SDNENPAETPDDSTGTSTGADTTVNTGDMSHAGMYAALTTASLCALLGMAAVYMRRRKDI CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIRRNKIIASVAVSVMTGVLVAGNLVPLQGYYAFAQETGVTAMRYSAVKDINKTLEGYTP CCCCHHHHHHHHHHHHHHHHHCCCEEEECCEEEEHHHCCCCHHHHHHHHHHHHHHCCCCC IDSSDPVEFGGTYIKYQGETIQLSETAIYLDGSLSDELAAQYPYVYNDITKALSADALKN CCCCCCCCCCCEEEEEECCEEEEEEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHCC GTADNPMTVYVAPYVYWIDDPAATDTVQKTEGYSVPYGMVVNSDYLTIKGLTGNPDNVVL CCCCCCEEEEEEEEEEECCCCCCCCCHHHCCCCCCCEEEEEECCEEEEEECCCCCCCEEE AGNRGQSHASNGNYTMFRFNCSGALTVKNITIGNYCSVDLDYPLMSELNQAKRTDTITQA ECCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCEEEEEECCHHHHHHHHHHHCCCHHHH QLADMSGDKMFADNCNFISRLNLVPISGALRNLYNNCHFESTDDALNGNAVYVGCDFDFY HHHCCCCCEEEECCCCEEHEEEEEECHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC GNRPLYSSYNTGSTFLGCTFNCKILNVEAEPTQFFTKEGGTITAVDCVYNSNLSVPITMG CCCCEECCCCCCCEEEEEEEEEEEEEECCCCCHHEECCCCEEEEEEEEECCCCCEEEEEC WTKFPSDSLKCYQSNIIHNGKNITIGGEGAKETVDMTGKSVLNAYKVVSGGKTYYNTYNL CCCCCCHHHHHHHHHHEECCCEEEECCCCCCHHHHHCHHHHHHHHHHCCCCCEEEEEEEE LKGSDDWDPLGVKDVIAAAGQEAIATQLTIKSDVSEIESGKETASVGGTVNYFYGTNDTT ECCCCCCCCCCHHHHHHHCCCCHHEEEEEEHHHHHHHHCCCCCCCCCCEEEEEECCCCCC QKITYSVSDEDKAYVKLTDNGDGTCKVEGTNNDDAAKKVIINASTESGLEAAVGITVKPS EEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEECCC KLDAPEYIKTPVITNDGQGSLKVDYSLDLGSREDMSAISWYRCTDAEGSNKVLVAVTRND CCCCCHHHCCCEEECCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEECCC SPEYTYKLTAGDVGYYIMAKVESKNIRSDYGTPVNTVYDKAIGVKDVRSKNLSTDFSNFP CCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCHHCCC NIKQSEIKAGFWTVDYNRPADTESFGKWQGADTEEPWVYGVTGNGCVGAGLYQGTQGSRL CCCHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCEECCCCCCEE MYTPVEGTYGDMSLKLVVDPAKTAGQGFGSAGQYMDVLLKFDTSTLTGYGLRIIRTKASS EEECCCCCCCCEEEEEEECCCHHCCCCCCCCCCEEEEEEEECCCEECCCCEEEEEEECCC NAVTFVLVKYDNGAVTEISDEVIASCYVTGCTISLKTEGNKLTAHVETPTEQLADQAAKG CEEEEEEEEECCCCEEHHHHHHHHEEEEEEEEEEEEECCCEEEEEECCCHHHHHHHHHCC YPHVVDLTADIAANSFGGVAIQHTGTTGTGGWQNTTMLHNLDITWEGENNQNPEYVEENP CCEEEEEEEHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC SDNENPAETPDDSTGTSTGADTTVNTGDMSHAGMYAALTTASLCALLGMAAVYMRRRKDI CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA