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The map label for this gene is ykrA [H]

Identifier: 238916300

GI number: 238916300

Start: 355070

End: 355846

Strand: Direct

Name: ykrA [H]

Synonym: EUBELI_00334

Alternate gene names: 238916300

Gene position: 355070-355846 (Clockwise)

Preceding gene: 238916299

Following gene: 238916303

Centisome position: 16.56

GC content: 34.75

Gene sequence:

>777_bases
ATGATTAAAATAGCATTTTTCGATATAGATGGAACATTGTTGAAAATGGGATGTAAAGAACCGACAGATAAAACAGTTAA
AGCGTTAAATTCTCTTCACCAGAATGGAATATTGCTTTGTATGGCAACTGGCAGAGGCTATCTTTCAATCCCTGAATTCA
AAGATATTACATTTGATGTGCTGCTTACATTTAATGGTTCATATGTAATGGCTGGAGAAAAGATTATTTTCAGAAATCCC
CTGAATAATAATGATAAACATCAAATAATTCAAAATCTTAATAAAATGAACAGAGCAGCTGCAATCAGCAATGAGCATTT
TATTGTTACTAATGGCACAGATGAGCATCTGGAAGAGTACTTTAAATTTGGAAATGAAACATTGACAATTGCAGATAATT
TCGATGAGTTATGTAAAGAAGATATTTATCAGATTATGTGTGCGTGCAGAAAAGAAGAATACGCCCAGATACTGCAAGGA
ACTGAAAATACCCAGATAACTGCATGGTGGGATAAAGCAGCAGATATAATTCCATTAAATTGTGGTAAGGGAAATGCTGT
AAATGCAGTGCTTAATTATTATGGATTATCGAAAGATGAGGCGATTGCTTTTGGTGATGGTAGAAATGATATTGAAATGT
TAGAAGCTGTTGGTACAGGAGTGGCCATGGGGAATGCCATTGATGAAGTCAAAGCAAGAGCAGATGTCATATGTAAATCC
GTTGAAGAAGACGGAGTGTATCATTACTGTCTGGAGAAAAAACTCATTAAATGCTGA

Upstream 100 bases:

>100_bases
ATAATATAATGATTTTTCAAAAGGTAAAGCGAGTAATATGAGATTTGATAAGAGAACGTTTTAATAATGTATTATATCAA
ACAGTATTGGAGAGCCATAT

Downstream 100 bases:

>100_bases
TGGACTTATTATACAGCAGGGTTGCAGAGTGTTATATACTCTGCAACCCTGTTAGTCATTTATAGTCTTAATTTTACCAC
CACTTCTCACGGTAAGAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MIKIAFFDIDGTLLKMGCKEPTDKTVKALNSLHQNGILLCMATGRGYLSIPEFKDITFDVLLTFNGSYVMAGEKIIFRNP
LNNNDKHQIIQNLNKMNRAAAISNEHFIVTNGTDEHLEEYFKFGNETLTIADNFDELCKEDIYQIMCACRKEEYAQILQG
TENTQITAWWDKAADIIPLNCGKGNAVNAVLNYYGLSKDEAIAFGDGRNDIEMLEAVGTGVAMGNAIDEVKARADVICKS
VEEDGVYHYCLEKKLIKC

Sequences:

>Translated_258_residues
MIKIAFFDIDGTLLKMGCKEPTDKTVKALNSLHQNGILLCMATGRGYLSIPEFKDITFDVLLTFNGSYVMAGEKIIFRNP
LNNNDKHQIIQNLNKMNRAAAISNEHFIVTNGTDEHLEEYFKFGNETLTIADNFDELCKEDIYQIMCACRKEEYAQILQG
TENTQITAWWDKAADIIPLNCGKGNAVNAVLNYYGLSKDEAIAFGDGRNDIEMLEAVGTGVAMGNAIDEVKARADVICKS
VEEDGVYHYCLEKKLIKC
>Mature_258_residues
MIKIAFFDIDGTLLKMGCKEPTDKTVKALNSLHQNGILLCMATGRGYLSIPEFKDITFDVLLTFNGSYVMAGEKIIFRNP
LNNNDKHQIIQNLNKMNRAAAISNEHFIVTNGTDEHLEEYFKFGNETLTIADNFDELCKEDIYQIMCACRKEEYAQILQG
TENTQITAWWDKAADIIPLNCGKGNAVNAVLNYYGLSKDEAIAFGDGRNDIEMLEAVGTGVAMGNAIDEVKARADVICKS
VEEDGVYHYCLEKKLIKC

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI1786982, Length=272, Percent_Identity=26.4705882352941, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI2367265, Length=276, Percent_Identity=27.1739130434783, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 28845; Mature: 28845

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKIAFFDIDGTLLKMGCKEPTDKTVKALNSLHQNGILLCMATGRGYLSIPEFKDITFDV
CEEEEEEECCCCEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCEEEE
LLTFNGSYVMAGEKIIFRNPLNNNDKHQIIQNLNKMNRAAAISNEHFIVTNGTDEHLEEY
EEEECCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHEECCCEEEEECCCHHHHHHH
FKFGNETLTIADNFDELCKEDIYQIMCACRKEEYAQILQGTENTQITAWWDKAADIIPLN
HHCCCCEEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEECCCCCEEEEE
CGKGNAVNAVLNYYGLSKDEAIAFGDGRNDIEMLEAVGTGVAMGNAIDEVKARADVICKS
CCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHH
VEEDGVYHYCLEKKLIKC
HHCCCEEHHHHHHHHHCC
>Mature Secondary Structure
MIKIAFFDIDGTLLKMGCKEPTDKTVKALNSLHQNGILLCMATGRGYLSIPEFKDITFDV
CEEEEEEECCCCEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCEEEE
LLTFNGSYVMAGEKIIFRNPLNNNDKHQIIQNLNKMNRAAAISNEHFIVTNGTDEHLEEY
EEEECCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHEECCCEEEEECCCHHHHHHH
FKFGNETLTIADNFDELCKEDIYQIMCACRKEEYAQILQGTENTQITAWWDKAADIIPLN
HHCCCCEEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEECCCCCEEEEE
CGKGNAVNAVLNYYGLSKDEAIAFGDGRNDIEMLEAVGTGVAMGNAIDEVKARADVICKS
CCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHH
VEEDGVYHYCLEKKLIKC
HHCCCEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]