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The map label for this gene is yfbS [C]

Identifier: 238896738

GI number: 238896738

Start: 4717241

End: 4718530

Strand: Reverse

Name: yfbS [C]

Synonym: KP1_4956

Alternate gene names: 238896738

Gene position: 4718530-4717241 (Counterclockwise)

Preceding gene: 238896739

Following gene: 238896737

Centisome position: 89.9

GC content: 53.41

Gene sequence:

>1290_bases
TTGATAGGAAAAATTATAAGTATGGAACCTATTACCATCACCCTATGTTTGCTGGTGTTCGCTATCATCATGTTTGTCTG
GGAGAAAGTGCCACTGGCAGTGACTTCCATGGTGGTTTGTGTGGCGTTAGTGCTCACCGGTGTATTGGATCTCAAGCAGG
CGTTTGCCGGTTTTATCGACAGCAACGTCATTCTTTTTGTCGCCATGTTCATCGTTGGCGGGGCGTTATTTGAAACCGGG
ATGGCAAACAAAGTCGGTGGCGTGATCACCCACTTCGCCAAAACGGAGAAGCAGCTGATCTTCATCATTATGATGGTGGT
TGGCGTAATGTCCGGTTTTCTCTCCAATACCGGTACGGCAGCCGTTTTGATCCCGGTCGTTATCGGTGTAGCCGCCAAAT
CGGGATTCACCCGTTCGCGTCTGCTGATGCCGCTGGTGTTTGCTGCCGCGCTTGGCGGCAACCTGTCGCTGATTGGCGCC
CCCGGTAACTTGATCGCGCAATCGGCCTTGCAGAATATCGGCAGCGGCTTCGGTTTCTTTGAGTATGCGAAAGTGGGCCT
GCCGATGCTGGTCTGCGGCATCCTCTATTTCCTAACCATCGGCTATAAGTTTCTGCCTAATAACTCGAACAGTAGTGAGG
TGGGCAGCATTGGCGAACAGCGGGATTACAGCCACGTTCCGCGCTGGAAGCAGATCCTGTCCCTGGTGGTGCTGATCGCC
ACGATCCTCGGCATGATTTTCGAAAAACAGACCGGTATTAGTCTGACGGTAGCCGGCTGCATTGGTGCCCTGGTGCTGGT
CATCACCGGCGTGTTGACGGAAAAACAGGCTTATAAAGCCATTGATTCGCAAACTATTTTTATCTTCGGCGGCACCCTGG
CGCTGGCTAAAGCGCTGGAAATGACCGGTGCGGGTAAGCTGGTTGCCGATCAGGTTATCGGCCTGCTGGGTAATAACTCC
TCACCGTTTATGCTGCTGGTAGTGGTCTTTGCCCTCTCCGTGGTGATGACCAACTTTATGTCTAATACCGCCACCGTCGC
GTTGCTGGTGCCGGTGAGTTTGTCGATTGCCGCCGGTATGGGCGCCGATCCGCGTGCGGTACTGATGGCGACGGTAATCG
GTAGCTCCTGCGCCTATGCGACGCCGATCGGTATGCCTGCCAACATGATGGTGCTGTCGGCCGGGGGCTATAAGTTCGTC
GATTACGCCAAATCCGGCATTCCTCTAATTATCGTTTCTACCATTGTCAGCCTGATCCTGCTGCCAATCCTTTTCCCTTT
TCATCCGTAA

Upstream 100 bases:

>100_bases
CACATCTCATTGCGAGATCATTCCGCAAAAACGCATTGACTTACTTTTTGCATGGGAATAATTTCTCCTTCGTCAATATT
GGATACAATATCATATATCA

Downstream 100 bases:

>100_bases
TTTACGGACGCTGTTCTGACTAAGGAGCCTTTATGAGCAAAAGTGAACAGATATCCCGCATGACCGACATTATGGCCAGG
TTCGTGGGATATACCGGCAA

Product: putative cation transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MIGKIISMEPITITLCLLVFAIIMFVWEKVPLAVTSMVVCVALVLTGVLDLKQAFAGFIDSNVILFVAMFIVGGALFETG
MANKVGGVITHFAKTEKQLIFIIMMVVGVMSGFLSNTGTAAVLIPVVIGVAAKSGFTRSRLLMPLVFAAALGGNLSLIGA
PGNLIAQSALQNIGSGFGFFEYAKVGLPMLVCGILYFLTIGYKFLPNNSNSSEVGSIGEQRDYSHVPRWKQILSLVVLIA
TILGMIFEKQTGISLTVAGCIGALVLVITGVLTEKQAYKAIDSQTIFIFGGTLALAKALEMTGAGKLVADQVIGLLGNNS
SPFMLLVVVFALSVVMTNFMSNTATVALLVPVSLSIAAGMGADPRAVLMATVIGSSCAYATPIGMPANMMVLSAGGYKFV
DYAKSGIPLIIVSTIVSLILLPILFPFHP

Sequences:

>Translated_429_residues
MIGKIISMEPITITLCLLVFAIIMFVWEKVPLAVTSMVVCVALVLTGVLDLKQAFAGFIDSNVILFVAMFIVGGALFETG
MANKVGGVITHFAKTEKQLIFIIMMVVGVMSGFLSNTGTAAVLIPVVIGVAAKSGFTRSRLLMPLVFAAALGGNLSLIGA
PGNLIAQSALQNIGSGFGFFEYAKVGLPMLVCGILYFLTIGYKFLPNNSNSSEVGSIGEQRDYSHVPRWKQILSLVVLIA
TILGMIFEKQTGISLTVAGCIGALVLVITGVLTEKQAYKAIDSQTIFIFGGTLALAKALEMTGAGKLVADQVIGLLGNNS
SPFMLLVVVFALSVVMTNFMSNTATVALLVPVSLSIAAGMGADPRAVLMATVIGSSCAYATPIGMPANMMVLSAGGYKFV
DYAKSGIPLIIVSTIVSLILLPILFPFHP
>Mature_429_residues
MIGKIISMEPITITLCLLVFAIIMFVWEKVPLAVTSMVVCVALVLTGVLDLKQAFAGFIDSNVILFVAMFIVGGALFETG
MANKVGGVITHFAKTEKQLIFIIMMVVGVMSGFLSNTGTAAVLIPVVIGVAAKSGFTRSRLLMPLVFAAALGGNLSLIGA
PGNLIAQSALQNIGSGFGFFEYAKVGLPMLVCGILYFLTIGYKFLPNNSNSSEVGSIGEQRDYSHVPRWKQILSLVVLIA
TILGMIFEKQTGISLTVAGCIGALVLVITGVLTEKQAYKAIDSQTIFIFGGTLALAKALEMTGAGKLVADQVIGLLGNNS
SPFMLLVVVFALSVVMTNFMSNTATVALLVPVSLSIAAGMGADPRAVLMATVIGSSCAYATPIGMPANMMVLSAGGYKFV
DYAKSGIPLIIVSTIVSLILLPILFPFHP

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

Organism=Homo sapiens, GI301069346, Length=466, Percent_Identity=21.0300429184549, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI301069349, Length=288, Percent_Identity=25, Blast_Score=72, Evalue=7e-13,
Organism=Escherichia coli, GI1788629, Length=225, Percent_Identity=34.2222222222222, Blast_Score=124, Evalue=8e-30,
Organism=Caenorhabditis elegans, GI71988385, Length=448, Percent_Identity=24.3303571428571, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI32565804, Length=437, Percent_Identity=24.2562929061785, Blast_Score=94, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6322263, Length=397, Percent_Identity=25.4408060453401, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24581759, Length=202, Percent_Identity=31.1881188118812, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI19920704, Length=202, Percent_Identity=31.1881188118812, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28574683, Length=202, Percent_Identity=31.1881188118812, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28574681, Length=202, Percent_Identity=31.1881188118812, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28574685, Length=202, Percent_Identity=31.1881188118812, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28574678, Length=202, Percent_Identity=31.1881188118812, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281366409, Length=480, Percent_Identity=22.0833333333333, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI17737623, Length=480, Percent_Identity=22.0833333333333, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24666468, Length=480, Percent_Identity=22.0833333333333, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45551633, Length=480, Percent_Identity=22.0833333333333, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898 [H]

Pfam domain/function: PF00939 Na_sulph_symp [H]

EC number: NA

Molecular weight: Translated: 44950; Mature: 44950

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGKIISMEPITITLCLLVFAIIMFVWEKVPLAVTSMVVCVALVLTGVLDLKQAFAGFID
CCCCEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SNVILFVAMFIVGGALFETGMANKVGGVITHFAKTEKQLIFIIMMVVGVMSGFLSNTGTA
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
AVLIPVVIGVAAKSGFTRSRLLMPLVFAAALGGNLSLIGAPGNLIAQSALQNIGSGFGFF
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCHH
EYAKVGLPMLVCGILYFLTIGYKFLPNNSNSSEVGSIGEQRDYSHVPRWKQILSLVVLIA
HHHHHCHHHHHHHHHHHHHCCCEECCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHH
TILGMIFEKQTGISLTVAGCIGALVLVITGVLTEKQAYKAIDSQTIFIFGGTLALAKALE
HHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHH
MTGAGKLVADQVIGLLGNNSSPFMLLVVVFALSVVMTNFMSNTATVALLVPVSLSIAAGM
HCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCC
GADPRAVLMATVIGSSCAYATPIGMPANMMVLSAGGYKFVDYAKSGIPLIIVSTIVSLIL
CCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHH
LPILFPFHP
HHHHHCCCC
>Mature Secondary Structure
MIGKIISMEPITITLCLLVFAIIMFVWEKVPLAVTSMVVCVALVLTGVLDLKQAFAGFID
CCCCEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SNVILFVAMFIVGGALFETGMANKVGGVITHFAKTEKQLIFIIMMVVGVMSGFLSNTGTA
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
AVLIPVVIGVAAKSGFTRSRLLMPLVFAAALGGNLSLIGAPGNLIAQSALQNIGSGFGFF
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCHH
EYAKVGLPMLVCGILYFLTIGYKFLPNNSNSSEVGSIGEQRDYSHVPRWKQILSLVVLIA
HHHHHCHHHHHHHHHHHHHCCCEECCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHH
TILGMIFEKQTGISLTVAGCIGALVLVITGVLTEKQAYKAIDSQTIFIFGGTLALAKALE
HHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHH
MTGAGKLVADQVIGLLGNNSSPFMLLVVVFALSVVMTNFMSNTATVALLVPVSLSIAAGM
HCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCC
GADPRAVLMATVIGSSCAYATPIGMPANMMVLSAGGYKFVDYAKSGIPLIIVSTIVSLIL
CCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHH
LPILFPFHP
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]