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The map label for this gene is ttdA [H]

Identifier: 238896737

GI number: 238896737

Start: 4716309

End: 4717208

Strand: Reverse

Name: ttdA [H]

Synonym: KP1_4955

Alternate gene names: 238896737

Gene position: 4717208-4716309 (Counterclockwise)

Preceding gene: 238896738

Following gene: 238896736

Centisome position: 89.88

GC content: 54.89

Gene sequence:

>900_bases
ATGAGCAAAAGTGAACAGATATCCCGCATGACCGACATTATGGCCAGGTTCGTGGGATATACCGGCAAAGTATTGCCTGA
TGACGTCACGGCAAAGCTGCAAGATCTGCATAAGAAAGAGATCAGTCAACTGGCCGATGTGATCTTCACCACCATGATTG
AAAACCAACGTCTGGCGAAAGAACTGGATCGTCCTTCCTGCCAGGACACCGGCGTGATCCAGTTTCTGGTGGAGTGCGGC
GCCAACTTCCCGCTGATCGGCGAGCTGGAAGCGCTGCTGCGCGAATCGGTAATCAAAGCTACCATCGACTCCCCGCTGCG
TCATAACAGCGTGGAGACCTTTGATGAATACAACACCGGCAAAAACGTCGGCAAAGGGACGCCGACGGTATTCTGGGAGA
TCGTTCCGAATTCCGACCAGTGCAGCATCTACACCTATATGGCTGGCGGCGGCTGCTCGCTGCCGGGTAAAGCGATGGTA
TTGATGCCGGGCGCTGGCTATGAAGGGGTGACTCGCTTCGTGCTGGATGTGATGACCAGCTATGGCCTGAATGCCTGCCC
GCCGCTGCTGGTTGGCGTTGGGGTGGCGACGTCTGTAGAAACCGCGGCGCTGCTGTCGAAGAAAGCGTTGATGCGTCCGA
TTGGTTCGCACAATGACAACGAACGTGCGGCATTGCTGGAAAAAATGCTCGAAGACGGCATCAACAAAATTGGCCTTGGC
CCGCAGGGAATGTCCGGCAATACCTCCGTGATGGGCGTCAATATCGAAAATACCGCACGCCACCCTTCCACTATTGGCGT
GGCGGTCAACGTCGGCTGCTGGTCGCACCGTAAAGGACATATCGTTTTCGATAAAGACCTGAACTACACCATTACGTCTC
ACACAGGAGTGGCATTCTGA

Upstream 100 bases:

>100_bases
CTCTAATTATCGTTTCTACCATTGTCAGCCTGATCCTGCTGCCAATCCTTTTCCCTTTTCATCCGTAATTTACGGACGCT
GTTCTGACTAAGGAGCCTTT

Downstream 100 bases:

>100_bases
TGACTAAAAAAATACTCACTACGCCCATTAAAGATGAAGATTTAGCGGATATTAAAGCGGGCGATATAATTTATCTCAAC
GGCCATATTGTGACCTGCCG

Product: tartrate dehydratase subunit alpha

Products: NA

Alternate protein names: L-TTD alpha [H]

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSKSEQISRMTDIMARFVGYTGKVLPDDVTAKLQDLHKKEISQLADVIFTTMIENQRLAKELDRPSCQDTGVIQFLVECG
ANFPLIGELEALLRESVIKATIDSPLRHNSVETFDEYNTGKNVGKGTPTVFWEIVPNSDQCSIYTYMAGGGCSLPGKAMV
LMPGAGYEGVTRFVLDVMTSYGLNACPPLLVGVGVATSVETAALLSKKALMRPIGSHNDNERAALLEKMLEDGINKIGLG
PQGMSGNTSVMGVNIENTARHPSTIGVAVNVGCWSHRKGHIVFDKDLNYTITSHTGVAF

Sequences:

>Translated_299_residues
MSKSEQISRMTDIMARFVGYTGKVLPDDVTAKLQDLHKKEISQLADVIFTTMIENQRLAKELDRPSCQDTGVIQFLVECG
ANFPLIGELEALLRESVIKATIDSPLRHNSVETFDEYNTGKNVGKGTPTVFWEIVPNSDQCSIYTYMAGGGCSLPGKAMV
LMPGAGYEGVTRFVLDVMTSYGLNACPPLLVGVGVATSVETAALLSKKALMRPIGSHNDNERAALLEKMLEDGINKIGLG
PQGMSGNTSVMGVNIENTARHPSTIGVAVNVGCWSHRKGHIVFDKDLNYTITSHTGVAF
>Mature_298_residues
SKSEQISRMTDIMARFVGYTGKVLPDDVTAKLQDLHKKEISQLADVIFTTMIENQRLAKELDRPSCQDTGVIQFLVECGA
NFPLIGELEALLRESVIKATIDSPLRHNSVETFDEYNTGKNVGKGTPTVFWEIVPNSDQCSIYTYMAGGGCSLPGKAMVL
MPGAGYEGVTRFVLDVMTSYGLNACPPLLVGVGVATSVETAALLSKKALMRPIGSHNDNERAALLEKMLEDGINKIGLGP
QGMSGNTSVMGVNIENTARHPSTIGVAVNVGCWSHRKGHIVFDKDLNYTITSHTGVAF

Specific function: Unknown

COG id: COG1951

COG function: function code C; Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I fumarase family [H]

Homologues:

Organism=Escherichia coli, GI1789442, Length=298, Percent_Identity=53.3557046979866, Blast_Score=348, Evalue=3e-97,
Organism=Escherichia coli, GI1790564, Length=258, Percent_Identity=24.4186046511628, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004646 [H]

Pfam domain/function: PF05681 Fumerase [H]

EC number: =4.2.1.32 [H]

Molecular weight: Translated: 32299; Mature: 32167

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSEQISRMTDIMARFVGYTGKVLPDDVTAKLQDLHKKEISQLADVIFTTMIENQRLAK
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELDRPSCQDTGVIQFLVECGANFPLIGELEALLRESVIKATIDSPLRHNSVETFDEYNTG
HHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHCCC
KNVGKGTPTVFWEIVPNSDQCSIYTYMAGGGCSLPGKAMVLMPGAGYEGVTRFVLDVMTS
CCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
YGLNACPPLLVGVGVATSVETAALLSKKALMRPIGSHNDNERAALLEKMLEDGINKIGLG
CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHCCCC
PQGMSGNTSVMGVNIENTARHPSTIGVAVNVGCWSHRKGHIVFDKDLNYTITSHTGVAF
CCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCEEEECCCCCCC
>Mature Secondary Structure 
SKSEQISRMTDIMARFVGYTGKVLPDDVTAKLQDLHKKEISQLADVIFTTMIENQRLAK
CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELDRPSCQDTGVIQFLVECGANFPLIGELEALLRESVIKATIDSPLRHNSVETFDEYNTG
HHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHCCC
KNVGKGTPTVFWEIVPNSDQCSIYTYMAGGGCSLPGKAMVLMPGAGYEGVTRFVLDVMTS
CCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
YGLNACPPLLVGVGVATSVETAALLSKKALMRPIGSHNDNERAALLEKMLEDGINKIGLG
CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHCCCC
PQGMSGNTSVMGVNIENTARHPSTIGVAVNVGCWSHRKGHIVFDKDLNYTITSHTGVAF
CCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]