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The map label for this gene is visC [H]

Identifier: 238896451

GI number: 238896451

Start: 4430987

End: 4432189

Strand: Reverse

Name: visC [H]

Synonym: KP1_4629

Alternate gene names: 238896451

Gene position: 4432189-4430987 (Counterclockwise)

Preceding gene: 238896452

Following gene: 238896450

Centisome position: 84.45

GC content: 61.68

Gene sequence:

>1203_bases
GTGCAAAGTGTTGATGTTGCCATTGTTGGCGGTGGAATGGTGGGGCTGGCGGTAGCCTGCGGTCTACAGGGTAGCGGCCT
GCGCGTCGCAGTGCTGGAGAAAGCAGAGCCGCGACCGCTGGCCGCCGATGCGCCGCCGGCGCTGCGCGTTTCGGCAATTA
ATGCCGCCAGCGAAAAGCTGCTGACAAAGCTGGACGTCTGGCGCGAGATCGTCGCCCTGCGGGCCAGCTGCTATCACGGT
ATGGAAGTGTGGGATAAAGACAGCTTTGGCCACATTAGCTTCGATGACCAGAGCATGGGCTTTAGCCACCTTGGCTATAT
TATCGAAAATGCCGTAGTGCATCATGCATTGTGGCAGAAGGCGCAGCGTTGCGCTGACGTTACCCTGCTGGCTCCGGCGG
AACTTCAGCAGGTGGCGTGGGGCGAGAATGAAGCCTTTCTCAGCCTGCAGGACGGCAGCATGCTGACCGCGCGGCTGGTG
ATCGGCGCCGATGGTGCCAATTCATGGCTGCGCAATAAAGCCGATATTCCGCTGACCTTCTGGGATTACCATCATCATGC
GCTGGTGGCGACCATCCGTACCGCTGAGCCGCATCAGGCGGTGGCCCGCCAGGCGTTCCATGGCGACGGGATCCTCGCCT
TCCTGCCGCTCAGCGATCCGCACCTGTGCTCGATCGTCTGGTCGCTATCGCCGGGGGAAGCGCAGCGGATGCAGCAGGCT
GATGAAACCACCTTCAACCAGGCGCTGAATATCGCGTTCGATAATCGCCTTGGCCTCTGCCAGCTGGCAAGTGAACGTGA
AGTTTTCCCGCTGACCGGCCGCTATGCCCGTCAGTTTGCCGCCCACCGGCTGGCGCTGGTCGGCGATGCCGCGCATACCA
TCCATCCGCTGGCCGGGCAGGGGGTCAACCTCGGTTTTATGGATGCCGCCGAGCTTATTGACGAGCTGAAGCGCCTGCAC
GTCCAGGGCAAAGATATCGGCCAGCATCTTTATCTGCGCCGCTACGAGCGCAGCCGCAAGCACAGCGCGGCGCTGATGCT
GGCGGGCATGCAGGGCTTCCGCGAAATGTTCTCCGGGAGCCATCCGGCGAAGAAACTTCTTCGCGATGTGGGACTCAAAC
TGGCCGATACGCTGCCGGGCGTGAAACCGCAGCTGATTCGCCAGGCGATGGGCCTCAACGATCTGCCTGCCTGGTTACGT
TAA

Upstream 100 bases:

>100_bases
GGGCGCAACGTCGGTCTGATGGCGATGGAATTATTTACCCCGGCGCGCGATGCGCTGGCGCAGCGTACCCTCGGTTGGGT
TCCCCGTTAAGGAGTAGAAC

Downstream 100 bases:

>100_bases
CCGCGTCACACTTCTTTCACCCGGCCTGGGCGCCGGGTTTTCCCCCTCATTTGAAATATTCTAATTTCACCTCTTTTTTC
GCATTAGATTTATTAATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEKAEPRPLAADAPPALRVSAINAASEKLLTKLDVWREIVALRASCYHG
MEVWDKDSFGHISFDDQSMGFSHLGYIIENAVVHHALWQKAQRCADVTLLAPAELQQVAWGENEAFLSLQDGSMLTARLV
IGADGANSWLRNKADIPLTFWDYHHHALVATIRTAEPHQAVARQAFHGDGILAFLPLSDPHLCSIVWSLSPGEAQRMQQA
DETTFNQALNIAFDNRLGLCQLASEREVFPLTGRYARQFAAHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIDELKRLH
VQGKDIGQHLYLRRYERSRKHSAALMLAGMQGFREMFSGSHPAKKLLRDVGLKLADTLPGVKPQLIRQAMGLNDLPAWLR

Sequences:

>Translated_400_residues
MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEKAEPRPLAADAPPALRVSAINAASEKLLTKLDVWREIVALRASCYHG
MEVWDKDSFGHISFDDQSMGFSHLGYIIENAVVHHALWQKAQRCADVTLLAPAELQQVAWGENEAFLSLQDGSMLTARLV
IGADGANSWLRNKADIPLTFWDYHHHALVATIRTAEPHQAVARQAFHGDGILAFLPLSDPHLCSIVWSLSPGEAQRMQQA
DETTFNQALNIAFDNRLGLCQLASEREVFPLTGRYARQFAAHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIDELKRLH
VQGKDIGQHLYLRRYERSRKHSAALMLAGMQGFREMFSGSHPAKKLLRDVGLKLADTLPGVKPQLIRQAMGLNDLPAWLR
>Mature_400_residues
MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEKAEPRPLAADAPPALRVSAINAASEKLLTKLDVWREIVALRASCYHG
MEVWDKDSFGHISFDDQSMGFSHLGYIIENAVVHHALWQKAQRCADVTLLAPAELQQVAWGENEAFLSLQDGSMLTARLV
IGADGANSWLRNKADIPLTFWDYHHHALVATIRTAEPHQAVARQAFHGDGILAFLPLSDPHLCSIVWSLSPGEAQRMQQA
DETTFNQALNIAFDNRLGLCQLASEREVFPLTGRYARQFAAHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIDELKRLH
VQGKDIGQHLYLRRYERSRKHSAALMLAGMQGFREMFSGSHPAKKLLRDVGLKLADTLPGVKPQLIRQAMGLNDLPAWLR

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=381, Percent_Identity=33.3333333333333, Blast_Score=179, Evalue=3e-45,
Organism=Homo sapiens, GI32967307, Length=347, Percent_Identity=33.4293948126801, Blast_Score=159, Evalue=6e-39,
Organism=Escherichia coli, GI1789273, Length=400, Percent_Identity=86.25, Blast_Score=721, Evalue=0.0,
Organism=Escherichia coli, GI1786883, Length=392, Percent_Identity=39.7959183673469, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI1789274, Length=393, Percent_Identity=27.9898218829517, Blast_Score=150, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI25146631, Length=431, Percent_Identity=31.7865429234339, Blast_Score=172, Evalue=4e-43,
Organism=Saccharomyces cerevisiae, GI6321694, Length=454, Percent_Identity=25.1101321585903, Blast_Score=110, Evalue=5e-25,
Organism=Drosophila melanogaster, GI19920760, Length=421, Percent_Identity=33.0166270783848, Blast_Score=184, Evalue=7e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 43809; Mature: 43809

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEKAEPRPLAADAPPALRVSAINAASEKL
CCCCEEEEECCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHH
LTKLDVWREIVALRASCYHGMEVWDKDSFGHISFDDQSMGFSHLGYIIENAVVHHALWQK
HHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH
AQRCADVTLLAPAELQQVAWGENEAFLSLQDGSMLTARLVIGADGANSWLRNKADIPLTF
HHHHCCEEEECHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECCCCCHHHCCCCCCCEEE
WDYHHHALVATIRTAEPHQAVARQAFHGDGILAFLPLSDPHLCSIVWSLSPGEAQRMQQA
ECCCCEEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHH
DETTFNQALNIAFDNRLGLCQLASEREVFPLTGRYARQFAAHRLALVGDAAHTIHPLAGQ
HHHHHHHHEEEEECCCCCCEEECCCCCEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCCC
GVNLGFMDAAELIDELKRLHVQGKDIGQHLYLRRYERSRKHSAALMLAGMQGFREMFSGS
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HPAKKLLRDVGLKLADTLPGVKPQLIRQAMGLNDLPAWLR
CHHHHHHHHHCCHHHHHCCCCCHHHHHHHCCCCCCCHHCC
>Mature Secondary Structure
MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEKAEPRPLAADAPPALRVSAINAASEKL
CCCCEEEEECCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHH
LTKLDVWREIVALRASCYHGMEVWDKDSFGHISFDDQSMGFSHLGYIIENAVVHHALWQK
HHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH
AQRCADVTLLAPAELQQVAWGENEAFLSLQDGSMLTARLVIGADGANSWLRNKADIPLTF
HHHHCCEEEECHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECCCCCHHHCCCCCCCEEE
WDYHHHALVATIRTAEPHQAVARQAFHGDGILAFLPLSDPHLCSIVWSLSPGEAQRMQQA
ECCCCEEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHH
DETTFNQALNIAFDNRLGLCQLASEREVFPLTGRYARQFAAHRLALVGDAAHTIHPLAGQ
HHHHHHHHEEEEECCCCCCEEECCCCCEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCCC
GVNLGFMDAAELIDELKRLHVQGKDIGQHLYLRRYERSRKHSAALMLAGMQGFREMFSGS
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HPAKKLLRDVGLKLADTLPGVKPQLIRQAMGLNDLPAWLR
CHHHHHHHHHCCHHHHHCCCCCHHHHHHHCCCCCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]