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The map label for this gene is mrkF [H]

Identifier: 238896386

GI number: 238896386

Start: 4368238

End: 4368873

Strand: Reverse

Name: mrkF [H]

Synonym: KP1_4555

Alternate gene names: 238896386

Gene position: 4368873-4368238 (Counterclockwise)

Preceding gene: 238896387

Following gene: 238896379

Centisome position: 83.24

GC content: 57.7

Gene sequence:

>636_bases
ATGAAGGGATTGCCGAAAAACACTATCGCGTGGCTGCTATTTTGCGGCAGCCTCGCCGCCCCCTCGGCGTGGGGTTTTGA
GACCAATTACGATCGCGGACGGGTCGATTTTGCCGGGCGGGTGACGGATATTTCCTGTAGCGTCGCGCTAAACGGCGGCC
AGCATGCCGGCAGCGGTAATGTCTGGCTGGCGCCGGTCAGCCTGGCGGAAGTCCACGATCGCGGGGCCGGGGCGTTTATG
AAACCGCAGCCGTTTACCCTGGCACTGTCAAACTGCCAGCTGCGCCATGATGGTGGGGCAGCCTCGCAGGATGAGGTGCG
TCGGGTCAGCGTGCGCTGGGTCGATGGTTTTTTACTGACGGCGGTCGGTAACGAAAACGCCGGGTATCTGGCCAATACCT
TGCCGGATGGAGCGCAGAATATTTATCTGGCCCTATCGACTAACGATAATAATACGCTGGATAAGAGTAATAAAATTGTC
CCGGCGGACCCGCAGCAAAATCAGGTGCGTTTGCAGGAAAGCGCGGTCAGCGGCGGCCTGTTCACCTATTACGTTGGCTA
TGTTTCGCCAACGCCGAAAAGCGCCACCAGCGGGCCGATTACCAGCTGGGCAACGTGGGAATTAGTTTATAATTAA

Upstream 100 bases:

>100_bases
CTGCACGCGCGTTTTTATCAGTATGGCCCGACGACCAGCACCGGCGAGGTGGAGTCGCATATGATCTTTAACCTGACGTA
CGATTAATACGGGAGGGGGA

Downstream 100 bases:

>100_bases
GTGACGTTAAAAAGCCGGGAATTCCCGGCTTTGTTTACATGGCAATATCATCGGCGACCAGTTGTTCAATACTGACTTCC
CGCCAGTAATGTCCCTGGAT

Product: fimbriae stability-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKGLPKNTIAWLLFCGSLAAPSAWGFETNYDRGRVDFAGRVTDISCSVALNGGQHAGSGNVWLAPVSLAEVHDRGAGAFM
KPQPFTLALSNCQLRHDGGAASQDEVRRVSVRWVDGFLLTAVGNENAGYLANTLPDGAQNIYLALSTNDNNTLDKSNKIV
PADPQQNQVRLQESAVSGGLFTYYVGYVSPTPKSATSGPITSWATWELVYN

Sequences:

>Translated_211_residues
MKGLPKNTIAWLLFCGSLAAPSAWGFETNYDRGRVDFAGRVTDISCSVALNGGQHAGSGNVWLAPVSLAEVHDRGAGAFM
KPQPFTLALSNCQLRHDGGAASQDEVRRVSVRWVDGFLLTAVGNENAGYLANTLPDGAQNIYLALSTNDNNTLDKSNKIV
PADPQQNQVRLQESAVSGGLFTYYVGYVSPTPKSATSGPITSWATWELVYN
>Mature_211_residues
MKGLPKNTIAWLLFCGSLAAPSAWGFETNYDRGRVDFAGRVTDISCSVALNGGQHAGSGNVWLAPVSLAEVHDRGAGAFM
KPQPFTLALSNCQLRHDGGAASQDEVRRVSVRWVDGFLLTAVGNENAGYLANTLPDGAQNIYLALSTNDNNTLDKSNKIV
PADPQQNQVRLQESAVSGGLFTYYVGYVSPTPKSATSGPITSWATWELVYN

Specific function: Appears to affect the stability of the intact fimbriae on the cell surface [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22581; Mature: 22581

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLPKNTIAWLLFCGSLAAPSAWGFETNYDRGRVDFAGRVTDISCSVALNGGQHAGSGN
CCCCCCHHHEEHEECCCCCCCCCCCCCCCCCCCCEEECCEEEEEEEEEEECCCCCCCCCC
VWLAPVSLAEVHDRGAGAFMKPQPFTLALSNCQLRHDGGAASQDEVRRVSVRWVDGFLLT
EEEEEEEHHHHHCCCCCCCCCCCCEEEEECCEEEEECCCCCCHHHHEEEEEEEECEEEEE
AVGNENAGYLANTLPDGAQNIYLALSTNDNNTLDKSNKIVPADPQQNQVRLQESAVSGGL
EECCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCEEEEHHHCCCCE
FTYYVGYVSPTPKSATSGPITSWATWELVYN
EEEEEEEECCCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKGLPKNTIAWLLFCGSLAAPSAWGFETNYDRGRVDFAGRVTDISCSVALNGGQHAGSGN
CCCCCCHHHEEHEECCCCCCCCCCCCCCCCCCCCEEECCEEEEEEEEEEECCCCCCCCCC
VWLAPVSLAEVHDRGAGAFMKPQPFTLALSNCQLRHDGGAASQDEVRRVSVRWVDGFLLT
EEEEEEEHHHHHCCCCCCCCCCCCEEEEECCEEEEECCCCCCHHHHEEEEEEEECEEEEE
AVGNENAGYLANTLPDGAQNIYLALSTNDNNTLDKSNKIVPADPQQNQVRLQESAVSGGL
EECCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCEEEEHHHCCCCE
FTYYVGYVSPTPKSATSGPITSWATWELVYN
EEEEEEEECCCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1670938 [H]