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The map label for this gene is yphH [H]

Identifier: 238895999

GI number: 238895999

Start: 3959231

End: 3959806

Strand: Direct

Name: yphH [H]

Synonym: KP1_4127

Alternate gene names: 238895999

Gene position: 3959231-3959806 (Clockwise)

Preceding gene: 238895994

Following gene: 238896000

Centisome position: 75.44

GC content: 57.12

Gene sequence:

>576_bases
ATGCAGCGTACTGGCTTTAATAACGCCCGGGTCCGGCAGGCCAATAAGTCGATTTTTCTTTCCCATCTGTGGCGGGAAAA
GCAGCTCAGTAAATCACAGCTCTCTCAACTCACCGGTCTCTCCATTCCGGCGGTGAGCAATATTCTGGCCGAGCTGCTTA
GCGAGGGATTGATCGGTCACTCAACGGAACACATGAGCAAACGGGGCGTGAACAGCGGCAGCTACCAGATCCCCGAGCAC
GGCGCCTGGACACTGTGCATGAATATCACCCCGACCAGCATTGAATATCAGCTTGCCGACGCCCGCCTGCTGGCAGTGGA
TGGCCATCAGCATTTGCCGGTCAACGCGCCCACTCCTCAGGCCCTGCTTGAGGCCATCGTTGAATGCTGGCGGCATATCC
ACCGCCGCTACCCGCAGCACAGCATCAATCTCGCCCTTGGCGTGCATGGACAGGTTGATCCGATTACCGGCGTTTCACAA
ACCATGCCCCAGGCACGCTGGAAAACACCGATCGAAATAAAGTATCTGCTTGAGGAGCGGCTTGGCGTGCAGGTTCGGGT
GGATAAGACTGCGTGA

Upstream 100 bases:

>100_bases
AAACAAAACGAAGTAAAAGTTGCAATAACAGGAGTCTATATCGCCAATTCGCTGTTAAAATGCGCAATGCTCACGCAATA
TAGTTAAGGGAGTTAAGTGT

Downstream 100 bases:

>100_bases
TGCTGGCGCTGGCGGAGAAGTGGCAGCATCAGGGTACACAGCAGGATTTTTGCGTGATCAACGTCGACTACGGTATCGGC
TCGTCATTTGTGATTAACGA

Product: putative NagC-like transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MQRTGFNNARVRQANKSIFLSHLWREKQLSKSQLSQLTGLSIPAVSNILAELLSEGLIGHSTEHMSKRGVNSGSYQIPEH
GAWTLCMNITPTSIEYQLADARLLAVDGHQHLPVNAPTPQALLEAIVECWRHIHRRYPQHSINLALGVHGQVDPITGVSQ
TMPQARWKTPIEIKYLLEERLGVQVRVDKTA

Sequences:

>Translated_191_residues
MQRTGFNNARVRQANKSIFLSHLWREKQLSKSQLSQLTGLSIPAVSNILAELLSEGLIGHSTEHMSKRGVNSGSYQIPEH
GAWTLCMNITPTSIEYQLADARLLAVDGHQHLPVNAPTPQALLEAIVECWRHIHRRYPQHSINLALGVHGQVDPITGVSQ
TMPQARWKTPIEIKYLLEERLGVQVRVDKTA
>Mature_191_residues
MQRTGFNNARVRQANKSIFLSHLWREKQLSKSQLSQLTGLSIPAVSNILAELLSEGLIGHSTEHMSKRGVNSGSYQIPEH
GAWTLCMNITPTSIEYQLADARLLAVDGHQHLPVNAPTPQALLEAIVECWRHIHRRYPQHSINLALGVHGQVDPITGVSQ
TMPQARWKTPIEIKYLLEERLGVQVRVDKTA

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI87082127, Length=190, Percent_Identity=53.1578947368421, Blast_Score=203, Evalue=7e-54,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 21391; Mature: 21391

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTGFNNARVRQANKSIFLSHLWREKQLSKSQLSQLTGLSIPAVSNILAELLSEGLIGH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
STEHMSKRGVNSGSYQIPEHGAWTLCMNITPTSIEYQLADARLLAVDGHQHLPVNAPTPQ
CHHHHHHCCCCCCCEECCCCCCEEEEEECCCCCEEEEECCEEEEEECCCCCCCCCCCCHH
ALLEAIVECWRHIHRRYPQHSINLALGVHGQVDPITGVSQTMPQARWKTPIEIKYLLEER
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHCCHHHCCCCHHHHHHHHHH
LGVQVRVDKTA
CCCEEEEECCC
>Mature Secondary Structure
MQRTGFNNARVRQANKSIFLSHLWREKQLSKSQLSQLTGLSIPAVSNILAELLSEGLIGH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
STEHMSKRGVNSGSYQIPEHGAWTLCMNITPTSIEYQLADARLLAVDGHQHLPVNAPTPQ
CHHHHHHCCCCCCCEECCCCCCEEEEEECCCCCEEEEECCEEEEEECCCCCCCCCCCCHH
ALLEAIVECWRHIHRRYPQHSINLALGVHGQVDPITGVSQTMPQARWKTPIEIKYLLEER
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHCCHHHCCCCHHHHHHHHHH
LGVQVRVDKTA
CCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]