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The map label for this gene is csiE [H]

Identifier: 238895994

GI number: 238895994

Start: 3951011

End: 3952288

Strand: Direct

Name: csiE [H]

Synonym: KP1_4121

Alternate gene names: 238895994

Gene position: 3951011-3952288 (Clockwise)

Preceding gene: 238895990

Following gene: 238895999

Centisome position: 75.28

GC content: 58.22

Gene sequence:

>1278_bases
ATGATGACCGTCATTGAACCACCATCTGCGCTTTCCAGTCCACAGCGCCGTAGCCAGGTGCTCCTGATGTTTTATCTGCC
CGGACAGTCGGTGACGACTGAACGGCTTGGCAGGATCAACCTCGTTGATGAGACCACGGCCCGGCAGGATATTGAGGAGA
CCGGACGCGAAATTCAGCGTTACCACCGTTTGACCCTCCAGTCACAGGTGGACGGCAGCTATCGGATTGAAGGCGCCGCG
CTCGACCAACGTTTATGTCTGCTGCATGCGCTGCGGCGGGGGCTGCGCCTCTGCCCACAGTTCGTTAATCATCATTTTAC
CCCGGCGCTGAAAACGCAGCTTAAACAGGAAGGCATTGCCCGCACCTTATACGATGATACCAATCTGCAGGCGCTGGTGA
ACCGCTGCGCGCGGGCGCTCAATCGCCAGTTTGACTGCCGCGACGTGCAGTTTCTGCGCTTGTACCTGCAGTACTGTCTG
CTCGAACATCACCGGGGATACTCTCCGGACTTCAATGAGGAACAGCAACGCTGGGCTCAAACCGCCGCCGAGTTCACCCT
GGCGCAGGAGATTGTCCGCCACTGGCAGCGTCGGGTCGGCGCTCCGCCCCATGTCGGAGAACCTTTTTTCCTCTCGCTGC
TGTTTATGTTGCTCAAAACCCCCGACCCGGACCGCGACGGTCACCCGCACGATCGCCGCCTGCGGCTGGCTATCTCCAGC
CTGATCCACCGCTTTCAGATCCTCGCTGGCAGAGCGTTCAGTGATGAGCAGGGGCTCAGCGATCAACTCTATATTCATTT
GTCGCAGGCGTTGATCCGCAGCGTGTTTGCTATCGGCATCGACAGCACGCTCACAGAGGAAGTGACCCGGCTCTACCCTC
GCTTACTGCGTACCACCCAGGCGGCATTGAGCGAATTCGAGGAGGCCTGGCACATCCGTTTTAATGAGGAAGAGACCGGT
TTAATCGCGGTGATCTTTGGCGCCTGGCTGATGCAGAAAAGCGACCTGCACGAGAAACAGGTGCTGTTGCTAACCGATGA
CAACCCAGCTATTGAAGAGGCCCTGGAACAACAGCTGCGCGAACTAACGCTGCTGCCGCTGAATATCAAATACCAGAGCG
TAGAGCGCTTTCAGAAGGAAGGTGCGCCCAAAGGGGTGACGCTTATCGTCACCCCCTATGCGACGGCGCTGCCGCTGTTT
TCGCCGCCGCTGATCCACGCGGAGAACTACTTCACTGAACGCCAACAGCAGCATATCTGCGCCATGCTCGAGGACTAG

Upstream 100 bases:

>100_bases
TGAACTTCGCCAGCAATCCTGAGTAAAAGCGGACGCTCTTCCCTGCCCACGCCGCGGTCATTGTCTATCCTTAGCGGAAA
CCCTAACTGGAACTTACCAG

Downstream 100 bases:

>100_bases
GCCGCCACCGCTTTTGGCCGTATAGCCATCGCCGGGAGCGTCAGCAGGGCCATCACCCAGAATACGCCCTGGTGCAGGTG
CTGATAGAGGAAACCGGCGA

Product: stationary phase inducible protein CsiE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MMTVIEPPSALSSPQRRSQVLLMFYLPGQSVTTERLGRINLVDETTARQDIEETGREIQRYHRLTLQSQVDGSYRIEGAA
LDQRLCLLHALRRGLRLCPQFVNHHFTPALKTQLKQEGIARTLYDDTNLQALVNRCARALNRQFDCRDVQFLRLYLQYCL
LEHHRGYSPDFNEEQQRWAQTAAEFTLAQEIVRHWQRRVGAPPHVGEPFFLSLLFMLLKTPDPDRDGHPHDRRLRLAISS
LIHRFQILAGRAFSDEQGLSDQLYIHLSQALIRSVFAIGIDSTLTEEVTRLYPRLLRTTQAALSEFEEAWHIRFNEEETG
LIAVIFGAWLMQKSDLHEKQVLLLTDDNPAIEEALEQQLRELTLLPLNIKYQSVERFQKEGAPKGVTLIVTPYATALPLF
SPPLIHAENYFTERQQQHICAMLED

Sequences:

>Translated_425_residues
MMTVIEPPSALSSPQRRSQVLLMFYLPGQSVTTERLGRINLVDETTARQDIEETGREIQRYHRLTLQSQVDGSYRIEGAA
LDQRLCLLHALRRGLRLCPQFVNHHFTPALKTQLKQEGIARTLYDDTNLQALVNRCARALNRQFDCRDVQFLRLYLQYCL
LEHHRGYSPDFNEEQQRWAQTAAEFTLAQEIVRHWQRRVGAPPHVGEPFFLSLLFMLLKTPDPDRDGHPHDRRLRLAISS
LIHRFQILAGRAFSDEQGLSDQLYIHLSQALIRSVFAIGIDSTLTEEVTRLYPRLLRTTQAALSEFEEAWHIRFNEEETG
LIAVIFGAWLMQKSDLHEKQVLLLTDDNPAIEEALEQQLRELTLLPLNIKYQSVERFQKEGAPKGVTLIVTPYATALPLF
SPPLIHAENYFTERQQQHICAMLED
>Mature_425_residues
MMTVIEPPSALSSPQRRSQVLLMFYLPGQSVTTERLGRINLVDETTARQDIEETGREIQRYHRLTLQSQVDGSYRIEGAA
LDQRLCLLHALRRGLRLCPQFVNHHFTPALKTQLKQEGIARTLYDDTNLQALVNRCARALNRQFDCRDVQFLRLYLQYCL
LEHHRGYSPDFNEEQQRWAQTAAEFTLAQEIVRHWQRRVGAPPHVGEPFFLSLLFMLLKTPDPDRDGHPHDRRLRLAISS
LIHRFQILAGRAFSDEQGLSDQLYIHLSQALIRSVFAIGIDSTLTEEVTRLYPRLLRTTQAALSEFEEAWHIRFNEEETG
LIAVIFGAWLMQKSDLHEKQVLLLTDDNPAIEEALEQQLRELTLLPLNIKYQSVERFQKEGAPKGVTLIVTPYATALPLF
SPPLIHAENYFTERQQQHICAMLED

Specific function: Unknown

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI87082124, Length=425, Percent_Identity=58.3529411764706, Blast_Score=490, Evalue=1e-140,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011608 [H]

Pfam domain/function: PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 49140; Mature: 49140

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTVIEPPSALSSPQRRSQVLLMFYLPGQSVTTERLGRINLVDETTARQDIEETGREIQR
CCEEECCCHHHCCCHHHCCEEEEEEECCCCCCHHHCCCEEECCHHHHHHHHHHHHHHHHH
YHRLTLQSQVDGSYRIEGAALDQRLCLLHALRRGLRLCPQFVNHHFTPALKTQLKQEGIA
HHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RTLYDDTNLQALVNRCARALNRQFDCRDVQFLRLYLQYCLLEHHRGYSPDFNEEQQRWAQ
HHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
TAAEFTLAQEIVRHWQRRVGAPPHVGEPFFLSLLFMLLKTPDPDRDGHPHDRRLRLAISS
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
LIHRFQILAGRAFSDEQGLSDQLYIHLSQALIRSVFAIGIDSTLTEEVTRLYPRLLRTTQ
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AALSEFEEAWHIRFNEEETGLIAVIFGAWLMQKSDLHEKQVLLLTDDNPAIEEALEQQLR
HHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHH
ELTLLPLNIKYQSVERFQKEGAPKGVTLIVTPYATALPLFSPPLIHAENYFTERQQQHIC
HHHCCEECCCHHHHHHHHHCCCCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHH
AMLED
HHCCC
>Mature Secondary Structure
MMTVIEPPSALSSPQRRSQVLLMFYLPGQSVTTERLGRINLVDETTARQDIEETGREIQR
CCEEECCCHHHCCCHHHCCEEEEEEECCCCCCHHHCCCEEECCHHHHHHHHHHHHHHHHH
YHRLTLQSQVDGSYRIEGAALDQRLCLLHALRRGLRLCPQFVNHHFTPALKTQLKQEGIA
HHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RTLYDDTNLQALVNRCARALNRQFDCRDVQFLRLYLQYCLLEHHRGYSPDFNEEQQRWAQ
HHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
TAAEFTLAQEIVRHWQRRVGAPPHVGEPFFLSLLFMLLKTPDPDRDGHPHDRRLRLAISS
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
LIHRFQILAGRAFSDEQGLSDQLYIHLSQALIRSVFAIGIDSTLTEEVTRLYPRLLRTTQ
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AALSEFEEAWHIRFNEEETGLIAVIFGAWLMQKSDLHEKQVLLLTDDNPAIEEALEQQLR
HHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHH
ELTLLPLNIKYQSVERFQKEGAPKGVTLIVTPYATALPLFSPPLIHAENYFTERQQQHIC
HHHCCEECCCHHHHHHHHHCCCCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHH
AMLED
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]