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The map label for this gene is yphH [H]

Identifier: 238896000

GI number: 238896000

Start: 3959803

End: 3960426

Strand: Direct

Name: yphH [H]

Synonym: KP1_4128

Alternate gene names: 238896000

Gene position: 3959803-3960426 (Clockwise)

Preceding gene: 238895999

Following gene: 238896001

Centisome position: 75.45

GC content: 53.69

Gene sequence:

>624_bases
GTGATGCTGGCGCTGGCGGAGAAGTGGCAGCATCAGGGTACACAGCAGGATTTTTGCGTGATCAACGTCGACTACGGTAT
CGGCTCGTCATTTGTGATTAACGATCATATTTATCGCGGCAGTCTGTACGGCAGCGGGCAGATTGGGCATACCATTGTCA
ATCCTGACGGCAACGCCTGCGACTGCGGAAGATACGGTTGCCTCGAAACCGTCGCCTCTCTCAGCGCGCTGAAAAAACAG
GCCCGAATGTGGCTCAAAACGCAGCCTGAAGCAACGCTCACCCCCGAGCAGTTAACCACGGCGTCGCTCATTGAGGCCTG
GAAAGAGGGAGATGTGCAAATTCGCGCATGGGTTGATAACGCTGCCAACGCGATTGGCTTAAGCCTCTATAATTTCCTGA
ATATATTAAATATTAATCAAATCTGGCTTTACGGGCGCAGCTGCGCCTTCGGTGAGCAGTGGCTGGAAAGTATCGTTAAA
CAAACGGGTTTCAACCCCTTTGACCACAGGGATACGCCGCGAGCGCACGCCACCCAAATTGGCTTTGGCCAGCTGACGCG
CGCCCAGCAGCTGATGGGGATAGGTTATCTGTACGTTGAGGAGCAATTGCAGACGCTGGTTTAG

Upstream 100 bases:

>100_bases
TTTCACAAACCATGCCCCAGGCACGCTGGAAAACACCGATCGAAATAAAGTATCTGCTTGAGGAGCGGCTTGGCGTGCAG
GTTCGGGTGGATAAGACTGC

Downstream 100 bases:

>100_bases
TCATAAACGAACGTGGCGGAGCGCAAATTTGTGTATTACGTTTAAATCACACGTCTCTCATAACGAGCTGATTATGAACA
CACTCCGCTATTTTGATTTT

Product: putative NagC-like transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MMLALAEKWQHQGTQQDFCVINVDYGIGSSFVINDHIYRGSLYGSGQIGHTIVNPDGNACDCGRYGCLETVASLSALKKQ
ARMWLKTQPEATLTPEQLTTASLIEAWKEGDVQIRAWVDNAANAIGLSLYNFLNILNINQIWLYGRSCAFGEQWLESIVK
QTGFNPFDHRDTPRAHATQIGFGQLTRAQQLMGIGYLYVEEQLQTLV

Sequences:

>Translated_207_residues
MMLALAEKWQHQGTQQDFCVINVDYGIGSSFVINDHIYRGSLYGSGQIGHTIVNPDGNACDCGRYGCLETVASLSALKKQ
ARMWLKTQPEATLTPEQLTTASLIEAWKEGDVQIRAWVDNAANAIGLSLYNFLNILNINQIWLYGRSCAFGEQWLESIVK
QTGFNPFDHRDTPRAHATQIGFGQLTRAQQLMGIGYLYVEEQLQTLV
>Mature_207_residues
MMLALAEKWQHQGTQQDFCVINVDYGIGSSFVINDHIYRGSLYGSGQIGHTIVNPDGNACDCGRYGCLETVASLSALKKQ
ARMWLKTQPEATLTPEQLTTASLIEAWKEGDVQIRAWVDNAANAIGLSLYNFLNILNINQIWLYGRSCAFGEQWLESIVK
QTGFNPFDHRDTPRAHATQIGFGQLTRAQQLMGIGYLYVEEQLQTLV

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Homo sapiens, GI298566315, Length=170, Percent_Identity=27.6470588235294, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI298566325, Length=170, Percent_Identity=27.6470588235294, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI4885285, Length=170, Percent_Identity=27.6470588235294, Blast_Score=64, Evalue=6e-11,
Organism=Homo sapiens, GI190014632, Length=170, Percent_Identity=27.6470588235294, Blast_Score=64, Evalue=7e-11,
Organism=Escherichia coli, GI87082127, Length=207, Percent_Identity=76.8115942028985, Blast_Score=337, Evalue=2e-94,
Organism=Escherichia coli, GI1787878, Length=128, Percent_Identity=28.125, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1786891, Length=157, Percent_Identity=26.7515923566879, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 23133; Mature: 23133

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLALAEKWQHQGTQQDFCVINVDYGIGSSFVINDHIYRGSLYGSGQIGHTIVNPDGNAC
CCCHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECEEEECCEECCCCCCCEEECCCCCCC
DCGRYGCLETVASLSALKKQARMWLKTQPEATLTPEQLTTASLIEAWKEGDVQIRAWVDN
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECC
AANAIGLSLYNFLNILNINQIWLYGRSCAFGEQWLESIVKQTGFNPFDHRDTPRAHATQI
CCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHC
GFGQLTRAQQLMGIGYLYVEEQLQTLV
CHHHHHHHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure
MMLALAEKWQHQGTQQDFCVINVDYGIGSSFVINDHIYRGSLYGSGQIGHTIVNPDGNAC
CCCHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECEEEECCEECCCCCCCEEECCCCCCC
DCGRYGCLETVASLSALKKQARMWLKTQPEATLTPEQLTTASLIEAWKEGDVQIRAWVDN
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECC
AANAIGLSLYNFLNILNINQIWLYGRSCAFGEQWLESIVKQTGFNPFDHRDTPRAHATQI
CCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHC
GFGQLTRAQQLMGIGYLYVEEQLQTLV
CHHHHHHHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]