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The map label for this gene is codA [H]

Identifier: 238895079

GI number: 238895079

Start: 2961214

End: 2962512

Strand: Direct

Name: codA [H]

Synonym: KP1_3111

Alternate gene names: 238895079

Gene position: 2961214-2962512 (Clockwise)

Preceding gene: 238895078

Following gene: 238895080

Centisome position: 56.42

GC content: 68.28

Gene sequence:

>1299_bases
GTGAGGAGACTGACGATGACGCTCCCCTCCTCTTGCGCGCCGCTCACCGGTATCAGCCGCGCCCGACTCCCGGCCTGGGC
GCTGCCCGACGGCTGGCCGACGCGGGCCAACGGTGAGCCGCTGCTGGCGGACCTGGCCTTTCGCGACGGCCGGATTGCCG
CATTGACCCCAACCGACCAGCCGACTCCCGGCCTGTGGGACCTGGCGGGAGCCCTGACGCTCCCCGGCCTGGTGGAACCC
CATGCCCATCTGGACAAGACATTCACCATTGAACGCTGCCGTCCGACGCAGGCCGGACTGCTGGCGGCGATCCACGCCAT
GCACGAGGATCGCCGACACTGGACCAGGGCAGATATTCAACGTCGGGCGTCCGCCGCGCTGGCCCGGGCGGCAGCGAATG
GCGTGACCCATTTGCGCAGCCATGTCGACTGGTTTACCGCCGACGCGCCGGACGCCTGGCAGGAGATCGCCCGCCTCGAT
ACCGGCGGCATCACCCTGGAGCGGGTGGCGCTGGTCCCGCTGCCCCTGTTTCAGGATCCGGTGGAAGCCGAGGCCATTGC
CCGCGCGGTCGCCAACAGCGGAGAGCGCTGCCTGCTGGGCGGCTTCATCCACTCCTCCAACTGGGACGCCGCCGCCATGG
AAAATCTGCTGTGCAGCGCGGCCCGCTGGGATCTGGATCTGGATTTGCATATTGATGAGGAGCTCAGCGAAGTGTCTCAG
GGGCTGACCTGGCTGGCGGATCATCTCTCCCGCCACCCTTTTCCCGGACATATCTGCTGCAGCCACGGCTGCGCGCTGGC
CGCCGGCAGCGACGAACAGGCGGCGCCGATCCTGCGCCAGCTGGCGGCGCACGGCGTCACCCTTATCGCTCTGCCGATGA
CCAACCTGCTGCTGCAGGATGCGACGTTCGGCCGCACGCCGCGCCAGCGAGGGATCACCCTGCTGCACGAGGCGCAGGCC
GCCGGCGTGGCCACCCTGCTCGGCTGCGACAACGTGCAGGATGCCTTCTGCCCGGCGGGGAGCTATGACCCGCTGGACAC
CCTGGCCTGCGGTCTGTTCAGCGCTCAGCTCAGCGACCTGTTCGACCAGCAGTCGCGGCTGATCTGCGATCGCGCGGCGC
TAACCGGTTCGCCGGCAGACGCGGCGCCCTTTGCCGTCGGGGCGACGGCCAGCGTGGTGATTTTCCCGGGTAGTGACCGT
TTTATCTGGCCTTTAAACAGCGCCGCCCGTCTGGTGGTTAACCACGGCAGGTTAACCCACCGGCGCGTGTGGCAGGAGGA
GATGGCACATGAGTCTTGA

Upstream 100 bases:

>100_bases
AGCACCGGGACAGCGTGCTGACGGCGGAAGAGAAAGCCGGCAACGACCAGATCACGCTCTGCTGTTCGCGGGCGAAATCG
CCGGGTCTGGTTTTGGATCT

Downstream 100 bases:

>100_bases
AGCAGGCGCCGGGGCGCCGCTGGCGCGGTATGCCGCCTGGCGCAGAGCCGGCGATTTTATCTTTCTCTCCGGCATTATTC
CGGTCAATCCCCTGACCGGC

Product: putative cytosine deaminase

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MRRLTMTLPSSCAPLTGISRARLPAWALPDGWPTRANGEPLLADLAFRDGRIAALTPTDQPTPGLWDLAGALTLPGLVEP
HAHLDKTFTIERCRPTQAGLLAAIHAMHEDRRHWTRADIQRRASAALARAAANGVTHLRSHVDWFTADAPDAWQEIARLD
TGGITLERVALVPLPLFQDPVEAEAIARAVANSGERCLLGGFIHSSNWDAAAMENLLCSAARWDLDLDLHIDEELSEVSQ
GLTWLADHLSRHPFPGHICCSHGCALAAGSDEQAAPILRQLAAHGVTLIALPMTNLLLQDATFGRTPRQRGITLLHEAQA
AGVATLLGCDNVQDAFCPAGSYDPLDTLACGLFSAQLSDLFDQQSRLICDRAALTGSPADAAPFAVGATASVVIFPGSDR
FIWPLNSAARLVVNHGRLTHRRVWQEEMAHES

Sequences:

>Translated_432_residues
MRRLTMTLPSSCAPLTGISRARLPAWALPDGWPTRANGEPLLADLAFRDGRIAALTPTDQPTPGLWDLAGALTLPGLVEP
HAHLDKTFTIERCRPTQAGLLAAIHAMHEDRRHWTRADIQRRASAALARAAANGVTHLRSHVDWFTADAPDAWQEIARLD
TGGITLERVALVPLPLFQDPVEAEAIARAVANSGERCLLGGFIHSSNWDAAAMENLLCSAARWDLDLDLHIDEELSEVSQ
GLTWLADHLSRHPFPGHICCSHGCALAAGSDEQAAPILRQLAAHGVTLIALPMTNLLLQDATFGRTPRQRGITLLHEAQA
AGVATLLGCDNVQDAFCPAGSYDPLDTLACGLFSAQLSDLFDQQSRLICDRAALTGSPADAAPFAVGATASVVIFPGSDR
FIWPLNSAARLVVNHGRLTHRRVWQEEMAHES
>Mature_432_residues
MRRLTMTLPSSCAPLTGISRARLPAWALPDGWPTRANGEPLLADLAFRDGRIAALTPTDQPTPGLWDLAGALTLPGLVEP
HAHLDKTFTIERCRPTQAGLLAAIHAMHEDRRHWTRADIQRRASAALARAAANGVTHLRSHVDWFTADAPDAWQEIARLD
TGGITLERVALVPLPLFQDPVEAEAIARAVANSGERCLLGGFIHSSNWDAAAMENLLCSAARWDLDLDLHIDEELSEVSQ
GLTWLADHLSRHPFPGHICCSHGCALAAGSDEQAAPILRQLAAHGVTLIALPMTNLLLQDATFGRTPRQRGITLLHEAQA
AGVATLLGCDNVQDAFCPAGSYDPLDTLACGLFSAQLSDLFDQQSRLICDRAALTGSPADAAPFAVGATASVVIFPGSDR
FIWPLNSAARLVVNHGRLTHRRVWQEEMAHES

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=404, Percent_Identity=27.4752475247525, Blast_Score=115, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 46571; Mature: 46571

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLTMTLPSSCAPLTGISRARLPAWALPDGWPTRANGEPLLADLAFRDGRIAALTPTDQ
CCEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCC
PTPGLWDLAGALTLPGLVEPHAHLDKTFTIERCRPTQAGLLAAIHAMHEDRRHWTRADIQ
CCCCHHHHHHHHCCCCCCCCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RRASAALARAAANGVTHLRSHVDWFTADAPDAWQEIARLDTGGITLERVALVPLPLFQDP
HHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCCCCCEEEHEEEECCCCCCCC
VEAEAIARAVANSGERCLLGGFIHSSNWDAAAMENLLCSAARWDLDLDLHIDEELSEVSQ
HHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
GLTWLADHLSRHPFPGHICCSHGCALAAGSDEQAAPILRQLAAHGVTLIALPMTNLLLQD
HHHHHHHHHHCCCCCCCEECCCCCEEECCCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHC
ATFGRTPRQRGITLLHEAQAAGVATLLGCDNVQDAFCPAGSYDPLDTLACGLFSAQLSDL
CCCCCCCHHHCCEEEEHHHHCCEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHH
FDQQSRLICDRAALTGSPADAAPFAVGATASVVIFPGSDRFIWPLNSAARLVVNHGRLTH
HHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCCCEEEECCCCCEEEEECCCHHH
RRVWQEEMAHES
HHHHHHHHCCCC
>Mature Secondary Structure
MRRLTMTLPSSCAPLTGISRARLPAWALPDGWPTRANGEPLLADLAFRDGRIAALTPTDQ
CCEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCC
PTPGLWDLAGALTLPGLVEPHAHLDKTFTIERCRPTQAGLLAAIHAMHEDRRHWTRADIQ
CCCCHHHHHHHHCCCCCCCCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RRASAALARAAANGVTHLRSHVDWFTADAPDAWQEIARLDTGGITLERVALVPLPLFQDP
HHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCCCCCEEEHEEEECCCCCCCC
VEAEAIARAVANSGERCLLGGFIHSSNWDAAAMENLLCSAARWDLDLDLHIDEELSEVSQ
HHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
GLTWLADHLSRHPFPGHICCSHGCALAAGSDEQAAPILRQLAAHGVTLIALPMTNLLLQD
HHHHHHHHHHCCCCCCCEECCCCCEEECCCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHC
ATFGRTPRQRGITLLHEAQAAGVATLLGCDNVQDAFCPAGSYDPLDTLACGLFSAQLSDL
CCCCCCCHHHCCEEEEHHHHCCEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHH
FDQQSRLICDRAALTGSPADAAPFAVGATASVVIFPGSDRFIWPLNSAARLVVNHGRLTH
HHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCCCEEEECCCCCEEEEECCCHHH
RRVWQEEMAHES
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]