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The map label for this gene is aarP [H]

Identifier: 238894978

GI number: 238894978

Start: 2865639

End: 2866517

Strand: Reverse

Name: aarP [H]

Synonym: KP1_3004

Alternate gene names: 238894978

Gene position: 2866517-2865639 (Counterclockwise)

Preceding gene: 238894980

Following gene: 238894976

Centisome position: 54.62

GC content: 58.36

Gene sequence:

>879_bases
GTGAAGACGATGGGTTACGGGACATTTGAAACATTACGGCGACAGAACGCGGTGCTGAAGGGAACCGTGGAGCTGAATTC
CGGTATTCAACTGGCCGCCTGGTATAACAATTGCGATACCGTGACGGTGCGCAGCGACCATCATACTTTAAGTCTGTACG
TCGCTGATGGCTACGAAAGCTATCAAAAGACGCCGCACGGCTGGAAAAATGGCGGCGGCCCGGATCGTTTTTGTCTGATG
CCGAAAGGCGATGAAAGCGTATGGGATATCCGCGGCGATCTGTCGTTTGTGCATCTTTACTGTACCGATGCGCACCTGCG
TCGCGTCGGCGAGGAGGTGTGGGACCGCAGCCCGGCGAACTTCACCCTGCAGGAAAAGACCTTCGCCAGCGATGATAAAA
TCACCGCAGTGTATCGTCAGTTTTTGCTGGCTAACGACTGGCGGCAGCCGGCGAACCAGCTGACCCTCAGCGCCGCCAGC
AGCTTACTGCTCACCCATCTGATCCAGCACTATTCCACCGTGCAGTGGCGTTTGCCGACGGTCACCGGCGGGCTGGCGCC
AGGCGTAAAGCGTCACGTACTGGCCTGGATCGATGCTCATCTCGATCAGCCCTTGACCCTGGCCGACCTGGCGCAGCAGG
CGGGTCTGAGTGAGTTTCATTTTGCTCGTATGTTTCGTCAGTCGCTAAATATGGCTCCGCATCAGTACGTCATGCAGCAG
CGAATGGCGAAGGCGCAAAACCTGATCTGCCATAGCGCGCTGCCGTTAACCGAGATAGCGCTGGCCTGTGGTTTTAGCTC
CCCCAGCCATTTCAGCCATCGGGTCAAAGCCGCCACCGGGCTGACGCCCTCCCAGCTACGGGCGGCGCAGCGCGGATAG

Upstream 100 bases:

>100_bases
TGTCGGCTTGCAAATTCTTGCGCTTATTTACTATCCGCTGGCGGTGAGGACTGGAAACCGCGCCGTAGTCTCCCTAGACT
AGGGCTTTTACAGACAATGT

Downstream 100 bases:

>100_bases
CACGCCGTAACTCACCCCGCCGAGCACCACGCCCCAGAAGGCGGAGCCAATTCCCGCCAGCGTCACCCCGCTGGCGGTGA
CCAGGAAGGTTAGCACCGCC

Product: putative AraC-type trancriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKTMGYGTFETLRRQNAVLKGTVELNSGIQLAAWYNNCDTVTVRSDHHTLSLYVADGYESYQKTPHGWKNGGGPDRFCLM
PKGDESVWDIRGDLSFVHLYCTDAHLRRVGEEVWDRSPANFTLQEKTFASDDKITAVYRQFLLANDWRQPANQLTLSAAS
SLLLTHLIQHYSTVQWRLPTVTGGLAPGVKRHVLAWIDAHLDQPLTLADLAQQAGLSEFHFARMFRQSLNMAPHQYVMQQ
RMAKAQNLICHSALPLTEIALACGFSSPSHFSHRVKAATGLTPSQLRAAQRG

Sequences:

>Translated_292_residues
MKTMGYGTFETLRRQNAVLKGTVELNSGIQLAAWYNNCDTVTVRSDHHTLSLYVADGYESYQKTPHGWKNGGGPDRFCLM
PKGDESVWDIRGDLSFVHLYCTDAHLRRVGEEVWDRSPANFTLQEKTFASDDKITAVYRQFLLANDWRQPANQLTLSAAS
SLLLTHLIQHYSTVQWRLPTVTGGLAPGVKRHVLAWIDAHLDQPLTLADLAQQAGLSEFHFARMFRQSLNMAPHQYVMQQ
RMAKAQNLICHSALPLTEIALACGFSSPSHFSHRVKAATGLTPSQLRAAQRG
>Mature_292_residues
MKTMGYGTFETLRRQNAVLKGTVELNSGIQLAAWYNNCDTVTVRSDHHTLSLYVADGYESYQKTPHGWKNGGGPDRFCLM
PKGDESVWDIRGDLSFVHLYCTDAHLRRVGEEVWDRSPANFTLQEKTFASDDKITAVYRQFLLANDWRQPANQLTLSAAS
SLLLTHLIQHYSTVQWRLPTVTGGLAPGVKRHVLAWIDAHLDQPLTLADLAQQAGLSEFHFARMFRQSLNMAPHQYVMQQ
RMAKAQNLICHSALPLTEIALACGFSSPSHFSHRVKAATGLTPSQLRAAQRG

Specific function: Transcriptional activator of 2'-N-acetyltransferase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790857, Length=100, Percent_Identity=35, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI171474011, Length=95, Percent_Identity=35.7894736842105, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 32722; Mature: 32722

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTMGYGTFETLRRQNAVLKGTVELNSGIQLAAWYNNCDTVTVRSDHHTLSLYVADGYES
CCCCCCCHHHHHHHCCCEEEEEEEECCCEEEEEEECCCCEEEEECCCEEEEEEEECCHHH
YQKTPHGWKNGGGPDRFCLMPKGDESVWDIRGDLSFVHLYCTDAHLRRVGEEVWDRSPAN
HHCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCEEEEEEECHHHHHHHHHHHHCCCCCC
FTLQEKTFASDDKITAVYRQFLLANDWRQPANQLTLSAASSLLLTHLIQHYSTVQWRLPT
EEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
VTGGLAPGVKRHVLAWIDAHLDQPLTLADLAQQAGLSEFHFARMFRQSLNMAPHQYVMQQ
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHH
RMAKAQNLICHSALPLTEIALACGFSSPSHFSHRVKAATGLTPSQLRAAQRG
HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure
MKTMGYGTFETLRRQNAVLKGTVELNSGIQLAAWYNNCDTVTVRSDHHTLSLYVADGYES
CCCCCCCHHHHHHHCCCEEEEEEEECCCEEEEEEECCCCEEEEECCCEEEEEEEECCHHH
YQKTPHGWKNGGGPDRFCLMPKGDESVWDIRGDLSFVHLYCTDAHLRRVGEEVWDRSPAN
HHCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCEEEEEEECHHHHHHHHHHHHCCCCCC
FTLQEKTFASDDKITAVYRQFLLANDWRQPANQLTLSAASSLLLTHLIQHYSTVQWRLPT
EEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
VTGGLAPGVKRHVLAWIDAHLDQPLTLADLAQQAGLSEFHFARMFRQSLNMAPHQYVMQQ
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHH
RMAKAQNLICHSALPLTEIALACGFSSPSHFSHRVKAATGLTPSQLRAAQRG
HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768849 [H]