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The map label for this gene is ygbK [H]

Identifier: 238894630

GI number: 238894630

Start: 2521396

End: 2522661

Strand: Reverse

Name: ygbK [H]

Synonym: KP1_2631

Alternate gene names: 238894630

Gene position: 2522661-2521396 (Counterclockwise)

Preceding gene: 238894631

Following gene: 238894629

Centisome position: 48.06

GC content: 65.96

Gene sequence:

>1266_bases
ATGCAGCTTGGTGTCATTGCCGATGACTTCACCGGCGCCACGGATATTGCCAGCTTCCTCGTGCGCAACGGCATGCCGAC
GGTGCAACTGAATGGCGTGCCGACCCGCGATCTTCCGCTGACCAGCGAGGCGGTGGTCATCAGCCTGAAAACTCGCTCCT
GCCCGGCGGAAATGGCCGTCAGCCAGTCGCTGGCGGCCCTGCGCTGGCTGCAGGCCCAGGGCTGTCAGCAGTTTTATTTC
AAGTACTGTTCCACTTTCGACAGCACCGCGCAGGGCAACATTGGCCCGGTGCTGGATGCCCTGCTGGCCGAGCTGGGTGA
GACGCGGACGGTGATTTCCCCGGCGCTGCCGGTTAACGGCCGCACGGTCTATCAGGGATATCTGTTCGTCGGCGAGCAAC
TGCTGAATGAGTCCGGGATGCGCCACCATCCGGTGACGCCGATGGAGGATGCGCACCTGGGCCGCTTAATTGAGCGCCAG
GGGCGCGGAAAAGCCGCGCTGATTGCCTGGCCGATTGTCGCCCGGGGGCCGGAGGCGGTCGCCGCCGCGCTGGCGGCAGT
CAACGATCCGGCGGTGCGCTATGTGGTGCTCGACGCCCTCAGCGAACAGGATCTGCTCACCCAGGGCGTGGCGCTGCGGG
AGATGAAGCTGGTCTCCGGCGGTTCCGGCCTCGCCATCGGCCTCGCCCGCGACTGGGCGCAGCGCCATGGCGCCCGGGGT
GAAAGCGCTCAGGCCGGCATGCCGCTGGTCGGCCCGGCGGTGGTGCTCTCGGGCTCCTGCTCGGTGATGACCAACAGCCA
GGTGGCGGCCTATCGTCAACAGGCCCCCGCCCGCGCCGTCGACTTAAGCGCCTGCTTTACCGATCTGGAGAGCTACGTCA
GGACGCTGACTGACTGGGTGGACGCGCAGCGCGATGCGCCGCTGGCGCCGATGATCTATGCCACCACCGAGCCGCAAACG
CTGCAGCGGATCCAGGCGCAGTATGGCGACAAGGCCAGCAGCGAACGGGTGGAACAGCTGTTTGCCGCCCTTGCCGCCGC
CCTGAAGGCGAAAGGATTTACCCGCTTTATTGTGGCCGGAGGGGAAACGTCGAGCATTGTGGCGCAGACCCTGGGGGTTG
AGGCGTTCCATATTGGGCCGACCATCTCCCCTGGCGTGCCCTGGGTGCGTGACACCCGCCAGCCGCTCTCCCTGGCGCTG
AAGTCAGGTAACTTCGGCGATATCCAGTTCTTTGCCCGTGCCCAGCAGGAGTTTCGTCATGACTGA

Upstream 100 bases:

>100_bases
CCGCCAGTAATGCCGGATTCGGTCGGGAAGATGACAGCGCGGTGATCAAGATTTTCAACGGCATCACCCTGCCGGGCCAT
AAACAGTGAGGAGAGACAAC

Downstream 100 bases:

>100_bases
GCAACAACTGCGAGAGGAAATGGTGCAGATTGGCGCCTCGTTGTTTAGCCGCGGCTATGCCACCGGCTCCGCTGGCAATC
TGTCGCTGCTGCTGCCGGAC

Product: ygbK domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MQLGVIADDFTGATDIASFLVRNGMPTVQLNGVPTRDLPLTSEAVVISLKTRSCPAEMAVSQSLAALRWLQAQGCQQFYF
KYCSTFDSTAQGNIGPVLDALLAELGETRTVISPALPVNGRTVYQGYLFVGEQLLNESGMRHHPVTPMEDAHLGRLIERQ
GRGKAALIAWPIVARGPEAVAAALAAVNDPAVRYVVLDALSEQDLLTQGVALREMKLVSGGSGLAIGLARDWAQRHGARG
ESAQAGMPLVGPAVVLSGSCSVMTNSQVAAYRQQAPARAVDLSACFTDLESYVRTLTDWVDAQRDAPLAPMIYATTEPQT
LQRIQAQYGDKASSERVEQLFAALAAALKAKGFTRFIVAGGETSSIVAQTLGVEAFHIGPTISPGVPWVRDTRQPLSLAL
KSGNFGDIQFFARAQQEFRHD

Sequences:

>Translated_421_residues
MQLGVIADDFTGATDIASFLVRNGMPTVQLNGVPTRDLPLTSEAVVISLKTRSCPAEMAVSQSLAALRWLQAQGCQQFYF
KYCSTFDSTAQGNIGPVLDALLAELGETRTVISPALPVNGRTVYQGYLFVGEQLLNESGMRHHPVTPMEDAHLGRLIERQ
GRGKAALIAWPIVARGPEAVAAALAAVNDPAVRYVVLDALSEQDLLTQGVALREMKLVSGGSGLAIGLARDWAQRHGARG
ESAQAGMPLVGPAVVLSGSCSVMTNSQVAAYRQQAPARAVDLSACFTDLESYVRTLTDWVDAQRDAPLAPMIYATTEPQT
LQRIQAQYGDKASSERVEQLFAALAAALKAKGFTRFIVAGGETSSIVAQTLGVEAFHIGPTISPGVPWVRDTRQPLSLAL
KSGNFGDIQFFARAQQEFRHD
>Mature_421_residues
MQLGVIADDFTGATDIASFLVRNGMPTVQLNGVPTRDLPLTSEAVVISLKTRSCPAEMAVSQSLAALRWLQAQGCQQFYF
KYCSTFDSTAQGNIGPVLDALLAELGETRTVISPALPVNGRTVYQGYLFVGEQLLNESGMRHHPVTPMEDAHLGRLIERQ
GRGKAALIAWPIVARGPEAVAAALAAVNDPAVRYVVLDALSEQDLLTQGVALREMKLVSGGSGLAIGLARDWAQRHGARG
ESAQAGMPLVGPAVVLSGSCSVMTNSQVAAYRQQAPARAVDLSACFTDLESYVRTLTDWVDAQRDAPLAPMIYATTEPQT
LQRIQAQYGDKASSERVEQLFAALAAALKAKGFTRFIVAGGETSSIVAQTLGVEAFHIGPTISPGVPWVRDTRQPLSLAL
KSGNFGDIQFFARAQQEFRHD

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1011 [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=386, Percent_Identity=60.880829015544, Blast_Score=459, Evalue=1e-130,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 45052; Mature: 45052

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLGVIADDFTGATDIASFLVRNGMPTVQLNGVPTRDLPLTSEAVVISLKTRSCPAEMAV
CCCCEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHH
SQSLAALRWLQAQGCQQFYFKYCSTFDSTAQGNIGPVLDALLAELGETRTVISPALPVNG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCC
RTVYQGYLFVGEQLLNESGMRHHPVTPMEDAHLGRLIERQGRGKAALIAWPIVARGPEAV
CEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECHHCCCHHHH
AAALAAVNDPAVRYVVLDALSEQDLLTQGVALREMKLVSGGSGLAIGLARDWAQRHGARG
HHHHHHCCCCHHEEHHHHHHCHHHHHHHCHHHHHEEEECCCCCEEEHHHHHHHHHCCCCC
ESAQAGMPLVGPAVVLSGSCSVMTNSQVAAYRQQAPARAVDLSACFTDLESYVRTLTDWV
CCCCCCCCCCCCHHEECCCCCEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
DAQRDAPLAPMIYATTEPQTLQRIQAQYGDKASSERVEQLFAALAAALKAKGFTRFIVAG
HHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC
GETSSIVAQTLGVEAFHIGPTISPGVPWVRDTRQPLSLALKSGNFGDIQFFARAQQEFRH
CCHHHHHHHHHCCEEEEECCCCCCCCCCHHCCCCCHHHEECCCCCCHHHHHHHHHHHHCC
D
C
>Mature Secondary Structure
MQLGVIADDFTGATDIASFLVRNGMPTVQLNGVPTRDLPLTSEAVVISLKTRSCPAEMAV
CCCCEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHH
SQSLAALRWLQAQGCQQFYFKYCSTFDSTAQGNIGPVLDALLAELGETRTVISPALPVNG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCC
RTVYQGYLFVGEQLLNESGMRHHPVTPMEDAHLGRLIERQGRGKAALIAWPIVARGPEAV
CEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECHHCCCHHHH
AAALAAVNDPAVRYVVLDALSEQDLLTQGVALREMKLVSGGSGLAIGLARDWAQRHGARG
HHHHHHCCCCHHEEHHHHHHCHHHHHHHCHHHHHEEEECCCCCEEEHHHHHHHHHCCCCC
ESAQAGMPLVGPAVVLSGSCSVMTNSQVAAYRQQAPARAVDLSACFTDLESYVRTLTDWV
CCCCCCCCCCCCHHEECCCCCEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
DAQRDAPLAPMIYATTEPQTLQRIQAQYGDKASSERVEQLFAALAAALKAKGFTRFIVAG
HHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC
GETSSIVAQTLGVEAFHIGPTISPGVPWVRDTRQPLSLALKSGNFGDIQFFARAQQEFRH
CCHHHHHHHHHCCEEEEECCCCCCCCCCHHCCCCCHHHEECCCCCCHHHHHHHHHHHHCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]