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The map label for this gene is ygbL [H]

Identifier: 238894629

GI number: 238894629

Start: 2520783

End: 2521403

Strand: Reverse

Name: ygbL [H]

Synonym: KP1_2630

Alternate gene names: 238894629

Gene position: 2521403-2520783 (Counterclockwise)

Preceding gene: 238894630

Following gene: 238894628

Centisome position: 48.04

GC content: 61.67

Gene sequence:

>621_bases
ATGACTGAGCAACAACTGCGAGAGGAAATGGTGCAGATTGGCGCCTCGTTGTTTAGCCGCGGCTATGCCACCGGCTCCGC
TGGCAATCTGTCGCTGCTGCTGCCGGACGGCAACCTGCTGGCGACGCCGACCGGCGCCTGCCTCGGCGAACTGCAGGCTC
AGCGGTTGTCGGTGGTGACGCTGCAAGGGGAATGGATCTCCGGCGACAAACCGTCGAAAGAGGTCACTTTTCACCGGGCG
GTCTATTTGCACAACCCGGCCTGCAAGGCGATCGTCCACTTGCACAGCCACTATCTAACCGCGCTCTCCTGCCTGCAGGG
GCTCGATCCGCACAACTGTATCCGCCCCTTTACCCCCTATGTGGTGATGCGCGTCGGCGACGTCCCGGTGGTTCCCTACT
ACCGGCCGGGCGATGACCGTATTGCCCAGGCGCTGGCCGGGCTGGCGCCGCGCTATAACGCCTTTTTACTGGCCAACCAC
GGACCGGTGGTTACTGGCTCATCGCTGCGCGAAGCCACCAACAATACCGAGGAACTGGAAGAGACCGCACGGCTGATATT
TACCCTCGGCAACCGCGAGATCCGCTACCTGACCGCTGACGAAGTGAAAGAACTGAGATAA

Upstream 100 bases:

>100_bases
CCCTGGGTGCGTGACACCCGCCAGCCGCTCTCCCTGGCGCTGAAGTCAGGTAACTTCGGCGATATCCAGTTCTTTGCCCG
TGCCCAGCAGGAGTTTCGTC

Downstream 100 bases:

>100_bases
AACCATGCCAAAATTCGCTGCAAATTTATCCATGCTGTTTACCGAACTGCCGTTCCTGGAACGCTTTGCCGCCGCTGCCC
GGGCGGGATTTGAAGCCGTT

Product: putative aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MTEQQLREEMVQIGASLFSRGYATGSAGNLSLLLPDGNLLATPTGACLGELQAQRLSVVTLQGEWISGDKPSKEVTFHRA
VYLHNPACKAIVHLHSHYLTALSCLQGLDPHNCIRPFTPYVVMRVGDVPVVPYYRPGDDRIAQALAGLAPRYNAFLLANH
GPVVTGSSLREATNNTEELEETARLIFTLGNREIRYLTADEVKELR

Sequences:

>Translated_206_residues
MTEQQLREEMVQIGASLFSRGYATGSAGNLSLLLPDGNLLATPTGACLGELQAQRLSVVTLQGEWISGDKPSKEVTFHRA
VYLHNPACKAIVHLHSHYLTALSCLQGLDPHNCIRPFTPYVVMRVGDVPVVPYYRPGDDRIAQALAGLAPRYNAFLLANH
GPVVTGSSLREATNNTEELEETARLIFTLGNREIRYLTADEVKELR
>Mature_205_residues
TEQQLREEMVQIGASLFSRGYATGSAGNLSLLLPDGNLLATPTGACLGELQAQRLSVVTLQGEWISGDKPSKEVTFHRAV
YLHNPACKAIVHLHSHYLTALSCLQGLDPHNCIRPFTPYVVMRVGDVPVVPYYRPGDDRIAQALAGLAPRYNAFLLANHG
PVVTGSSLREATNNTEELEETARLIFTLGNREIRYLTADEVKELR

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=205, Percent_Identity=74.6341463414634, Blast_Score=316, Evalue=6e-88,
Organism=Escherichia coli, GI1789164, Length=190, Percent_Identity=28.9473684210526, Blast_Score=71, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 22626; Mature: 22495

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQQLREEMVQIGASLFSRGYATGSAGNLSLLLPDGNLLATPTGACLGELQAQRLSVVT
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHCEEEEEE
LQGEWISGDKPSKEVTFHRAVYLHNPACKAIVHLHSHYLTALSCLQGLDPHNCIRPFTPY
EECCEECCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
VVMRVGDVPVVPYYRPGDDRIAQALAGLAPRYNAFLLANHGPVVTGSSLREATNNTEELE
EEEEECCCCCCCCEECCHHHHHHHHHCCCCCCCEEEEECCCCEEECHHHHHHCCCHHHHH
ETARLIFTLGNREIRYLTADEVKELR
HHHHHEEEECCCEEEEEEHHHHHHCC
>Mature Secondary Structure 
TEQQLREEMVQIGASLFSRGYATGSAGNLSLLLPDGNLLATPTGACLGELQAQRLSVVT
CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHCEEEEEE
LQGEWISGDKPSKEVTFHRAVYLHNPACKAIVHLHSHYLTALSCLQGLDPHNCIRPFTPY
EECCEECCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
VVMRVGDVPVVPYYRPGDDRIAQALAGLAPRYNAFLLANHGPVVTGSSLREATNNTEELE
EEEEECCCCCCCCEECCHHHHHHHHHCCCCCCCEEEEECCCCEEECHHHHHHCCCHHHHH
ETARLIFTLGNREIRYLTADEVKELR
HHHHHEEEECCCEEEEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240; 9278503 [H]