Click here to switch to the map view.

The map label for this gene is hcpA [H]

Identifier: 238894413

GI number: 238894413

Start: 2304685

End: 2305176

Strand: Direct

Name: hcpA [H]

Synonym: KP1_2398

Alternate gene names: 238894413

Gene position: 2304685-2305176 (Clockwise)

Preceding gene: 238894412

Following gene: 238894414

Centisome position: 43.91

GC content: 53.25

Gene sequence:

>492_bases
ATGGCAATTCCTGTTTATCTTTGGCTGAAAGACGACGGCGGCGCGGACATTAAAGGGTCTGTCGACGTTCAGGATCGTGA
AGGCAGTATCGAAGTGGTGGCCCAGGAGCATAACCTGTACATCCCGACCGATAACAACACCGGCAAACTGACCGGCACGC
GTATTCATACGCCGTTCCTGTTCACCAAGGAGATCGACTCCTCCAGCCCCTACCTGTACAAGGCGGTGACCACCGGCCAG
ACCCTGAAATCCGCCGAGTTCAAGTGGTACCGAATCAACGATGCCGGCCAGGAAGTGGAGTATTTCAATACCAAACTTGA
GAACGTCAAGGTGGTGAAAGTGAATCCCCTGATGCACGACATCAAAAACCCCGCCTACGAGAAGCACAACCATCTGGAAC
AGATTGAGCTGCGCTACGAGAAGATCACCTGGACCTATAAAGACGGCAACATCATTCACTCCGATAGCTGGAACGAACGC
GCCACCGCGTAA

Upstream 100 bases:

>100_bases
ATCAGTCTGGTGCCGCAGGTAGACGCCTGCCGGTTACCGGACCAACCCTCTGCGTCATCCCAGGATGATGGCGCTTCACT
ACACAATGGAGAGTAATTCC

Downstream 100 bases:

>100_bases
TTGCCGTCATATTTCGCGCCGCTGGCGCGCAGGCGACGTTCGCTCATCCCGGCCGCATCGTTATCTCTGCGGCCGGGGAT
TATTGCGGGCGATCGCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted protein hcp [H]

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MAIPVYLWLKDDGGADIKGSVDVQDREGSIEVVAQEHNLYIPTDNNTGKLTGTRIHTPFLFTKEIDSSSPYLYKAVTTGQ
TLKSAEFKWYRINDAGQEVEYFNTKLENVKVVKVNPLMHDIKNPAYEKHNHLEQIELRYEKITWTYKDGNIIHSDSWNER
ATA

Sequences:

>Translated_163_residues
MAIPVYLWLKDDGGADIKGSVDVQDREGSIEVVAQEHNLYIPTDNNTGKLTGTRIHTPFLFTKEIDSSSPYLYKAVTTGQ
TLKSAEFKWYRINDAGQEVEYFNTKLENVKVVKVNPLMHDIKNPAYEKHNHLEQIELRYEKITWTYKDGNIIHSDSWNER
ATA
>Mature_162_residues
AIPVYLWLKDDGGADIKGSVDVQDREGSIEVVAQEHNLYIPTDNNTGKLTGTRIHTPFLFTKEIDSSSPYLYKAVTTGQT
LKSAEFKWYRINDAGQEVEYFNTKLENVKVVKVNPLMHDIKNPAYEKHNHLEQIELRYEKITWTYKDGNIIHSDSWNERA
TA

Specific function: Unknown

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 18761; Mature: 18630

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPVYLWLKDDGGADIKGSVDVQDREGSIEVVAQEHNLYIPTDNNTGKLTGTRIHTPFL
CCEEEEEEEECCCCCCEECEEEEECCCCCEEEEEECCCEEEECCCCCCEEEEEEEECCEE
FTKEIDSSSPYLYKAVTTGQTLKSAEFKWYRINDAGQEVEYFNTKLENVKVVKVNPLMHD
EEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCEEEEECCCCCCEEEEEECHHHHH
IKNPAYEKHNHLEQIELRYEKITWTYKDGNIIHSDSWNERATA
HCCCCCHHHCCCEEEEEEEEEEEEEECCCCEEECCCCCCCCCC
>Mature Secondary Structure 
AIPVYLWLKDDGGADIKGSVDVQDREGSIEVVAQEHNLYIPTDNNTGKLTGTRIHTPFL
CEEEEEEEECCCCCCEECEEEEECCCCCEEEEEECCCEEEECCCCCCEEEEEEEECCEE
FTKEIDSSSPYLYKAVTTGQTLKSAEFKWYRINDAGQEVEYFNTKLENVKVVKVNPLMHD
EEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCEEEEECCCCCCEEEEEECHHHHH
IKNPAYEKHNHLEQIELRYEKITWTYKDGNIIHSDSWNERATA
HCCCCCHHHCCCEEEEEEEEEEEEEECCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]