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The map label for this gene is clpV1 [H]

Identifier: 238894414

GI number: 238894414

Start: 2305440

End: 2308094

Strand: Direct

Name: clpV1 [H]

Synonym: KP1_2399

Alternate gene names: 238894414

Gene position: 2305440-2308094 (Clockwise)

Preceding gene: 238894413

Following gene: 238894415

Centisome position: 43.93

GC content: 64.26

Gene sequence:

>2655_bases
ATGGAAAATCCAGCCAGCCTGTTACGCCGTCTTAATCCCTGCTGTGCCCGCGCAATGGAGGGGGCGGCCTCCCTGTGCCA
GACCCGGGCGCATGCCGAGATCCTGCCCGAGCACTGGCTGCTCAAGCTGCTGGAACAGGGGGAAGGCGATCTGACGGTGC
TGGCGCGGCGCTATGAATGGGATATGGATGCGCTGTGGCAGGATCTGCTGAGCTGGCTGGATAAACAGCCGCGCTCGGTA
CGTCATCGTCCCCAGCTCTCTCACCATACCCTGAGGCTGATGCAGGAGGCCTGGCTGATTGCCTCTCTCAGCGGCGAAGC
GCAGATCCGCAGTGTTCACCTGCTGATGGCGCTGGTTGAAAAACAGAATCTGATCCAGTGCGATGGCCTGTGGCCGCTGT
TAACGCTGGGCCAGCGTCAGCTGGAACGCCTGCGCCCCTTGCTGGATGCCCAGTCCGACGAACGTCCGCCAGCGCAGCAG
GAAGCGGCGCTTGCGCAGCCCCATGGCGGGGACGTGGAATTTGTGGGGCGTCCCGCGGGCAGCGAACTGAATGCGGATGG
GCTCAACCCGGCGCTGCAGAACGCGCTGGACAAATTCACTCTCGACGTCACCGCCAAAGCCAGAGACGGCCTGATTGACC
CGGTGTTCGGACGTGACACGGAAATCCGCCAGATGGTGGATATTCTCTCCCGTCGACGTAAAAACAACCCGATCCTCGTC
GGTGAGCCGGGCGTGGGCAAGACCGCTCTGGTGGAAGGCCTGGCGCTGTGCATTGCCGAAGGCAACGTCCCCGACGCGCT
GAAGCCGGTGTCGGTGCGCACCCTCGACCTCGGTCTGCTGCAGGCCGGCGCCGGGGTCAAAGGCGAGTTCGAGCAGCGGC
TGAAAAATATCATTGAGGCGGTACAGCAGTCGCCTTCGCCGGTGCTGCTGTTTATCGACGAGGCGCACACGATCATCGGC
GCGGGTAATCAGGCGGGCGGCGCGGATGCCGCCAACCTGTTGAAGCCGGCTCTGGCCCGGGGCGAGCTGCGGACCATCGC
CGCCACCACCTGGAGTGAATACAAGCAGTACTTCGAGCGCGACGCCGCGCTGGAGCGCCGCTTTCAGATGGTCAAGGTGG
ATGAGCCGGACGACGACACCGCCTGCCTGATGCTGCGCGGCCTGAAGTCCCGCTATGCCGACCACCACGGCGTGCATATC
ACGGATGATGCGGTGCGCGCCGCCGTGACGCTGTCACGACGCTATCTCACCGGTCGCCAGCTGCCGGACAAGGCAGTGGA
TTTACTCGACACCGCTTCCGCCCGCCTGCGTATGAGTTTGGATACCGTGCCTGAGCCGCTGACCCGCATGAAGGCGCAGC
TCACCGCGCTGGCGATGGAGAAGCAGGCGCTGCTGGAAGATATTGCGCTGGGCAACAGCGCCCGCGGCGATCGGCTGGCG
GCCATTGAGCAGGAGGAGATCCGTCTTATTCTGGCGCTGGATACCCTTGAAACTCAGTATGGTCAGGAGCTGCAGCTGAC
GGAAGCGCTGCTCGCCTGCCGCCGCGATATCTCCCGCCAGGCGGAAATTAGCGATCTACAAACCGCGCTTATCGCCGTCC
AGCAGGGCAATCCGCTGCTCGGGCTGGACGTCGACGTCCGCACCGTGGCGACGGTGATTGCCGACTGGACCGGCGTGCCG
CTCTCCTCGCTAATGAAAGATGAGCAGACGGAGCTGCTGAGTCTGGAAGAGAGTCTCGGCAAACGGGTGGTTGGCCAGGA
GGCGGCCCTGAGCGCTATTGCCCGGCGCCTGCGCGCCGCGAAAACCGGCCTGACGCCGGAGAACGGTCCGCAAGGGGTGT
TCCTGCTGGTCGGGCCGAGCGGCACCGGCAAAACGGAAACGGCGCTCGCCCTGGCCGATGCGCTGTTCGGCGGCGAGAAA
GCGCTGATCACCATCAATCTCTCCGAGTACCAGGAGCCGCACACCGTCAGCCAGCTGAAGGGTTCTCCGCCCGGCTACGT
CGGCTACGGCCAGGGCGGGATCCTGACCGAGGCGGTGCGCAAACGCCCCTACAGCGTGGTGCTGCTCGATGAGGTGGAAA
AGGCCCATCGCGATGTGATGAACCTGTTCTACCAGGTCTTCGACCGGGGGGTAATGCGCGACGGCGAGGGGCGTGAAATC
GACTTTCGCAACACCGTGATCCTGATGACCGCCAACCTCGGAAGCGACCTCCTGATGCAGTTGCTGGATGAACAGCCGGA
GGCCAGCGAATCAGACCTGCACGAGCTGCTGCGCCCGGTGCTGCGCGGCCACTTCCAGCCGGCGCTGCTGGCCCGCTTCC
AGACGGTGATTTACCGTCCGCTGCCGGCGGGAGCGCTGCGCGCCATTGTCGGCATGAAGCTCGGGCAGGTAAGTCAGCGT
CTGGCTTGCCATTACGGAATCACCACCACCCTCAGCGAGAGCCTGTTCGACGCGCTGACCGAGGCCTGCCTGCTGCCGGA
TACCGGCGCCCGTAACGTCGACAGTCTGCTCAATCAGCAGATCCTGCCGGCACTGAGTCAGCAGCTATTGAGCCATATGG
CGGCGGGGCAGAAACCGCGCCAGGTGACGCTGGGGTATCACGAAGAGGAAGGCGTCGTGATGGCGTTTGACGAGGGGACA
ATATCCGATGAGTAG

Upstream 100 bases:

>100_bases
AGAAAAACACAATCTGTCTGCCTGACCTTGTGCGCTTGGGGTTCCTGTTCAGGAACAGCGACGGGCGGTAGCGTGTCCGG
AAACAATAAGAGAGGATCTC

Downstream 100 bases:

>100_bases
CGTGAAATCGTTGTTGTTCAGCCATAACCACCACCTGCTTTCGGTGAAGGGATGTGAAGCCGGGCTTGATGTGCTGGCCT
TCGAGGGCGATGAAGCCCTG

Product: putative protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 884; Mature: 884

Protein sequence:

>884_residues
MENPASLLRRLNPCCARAMEGAASLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEWDMDALWQDLLSWLDKQPRSV
RHRPQLSHHTLRLMQEAWLIASLSGEAQIRSVHLLMALVEKQNLIQCDGLWPLLTLGQRQLERLRPLLDAQSDERPPAQQ
EAALAQPHGGDVEFVGRPAGSELNADGLNPALQNALDKFTLDVTAKARDGLIDPVFGRDTEIRQMVDILSRRRKNNPILV
GEPGVGKTALVEGLALCIAEGNVPDALKPVSVRTLDLGLLQAGAGVKGEFEQRLKNIIEAVQQSPSPVLLFIDEAHTIIG
AGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKSRYADHHGVHI
TDDAVRAAVTLSRRYLTGRQLPDKAVDLLDTASARLRMSLDTVPEPLTRMKAQLTALAMEKQALLEDIALGNSARGDRLA
AIEQEEIRLILALDTLETQYGQELQLTEALLACRRDISRQAEISDLQTALIAVQQGNPLLGLDVDVRTVATVIADWTGVP
LSSLMKDEQTELLSLEESLGKRVVGQEAALSAIARRLRAAKTGLTPENGPQGVFLLVGPSGTGKTETALALADALFGGEK
ALITINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGVMRDGEGREI
DFRNTVILMTANLGSDLLMQLLDEQPEASESDLHELLRPVLRGHFQPALLARFQTVIYRPLPAGALRAIVGMKLGQVSQR
LACHYGITTTLSESLFDALTEACLLPDTGARNVDSLLNQQILPALSQQLLSHMAAGQKPRQVTLGYHEEEGVVMAFDEGT
ISDE

Sequences:

>Translated_884_residues
MENPASLLRRLNPCCARAMEGAASLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEWDMDALWQDLLSWLDKQPRSV
RHRPQLSHHTLRLMQEAWLIASLSGEAQIRSVHLLMALVEKQNLIQCDGLWPLLTLGQRQLERLRPLLDAQSDERPPAQQ
EAALAQPHGGDVEFVGRPAGSELNADGLNPALQNALDKFTLDVTAKARDGLIDPVFGRDTEIRQMVDILSRRRKNNPILV
GEPGVGKTALVEGLALCIAEGNVPDALKPVSVRTLDLGLLQAGAGVKGEFEQRLKNIIEAVQQSPSPVLLFIDEAHTIIG
AGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKSRYADHHGVHI
TDDAVRAAVTLSRRYLTGRQLPDKAVDLLDTASARLRMSLDTVPEPLTRMKAQLTALAMEKQALLEDIALGNSARGDRLA
AIEQEEIRLILALDTLETQYGQELQLTEALLACRRDISRQAEISDLQTALIAVQQGNPLLGLDVDVRTVATVIADWTGVP
LSSLMKDEQTELLSLEESLGKRVVGQEAALSAIARRLRAAKTGLTPENGPQGVFLLVGPSGTGKTETALALADALFGGEK
ALITINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGVMRDGEGREI
DFRNTVILMTANLGSDLLMQLLDEQPEASESDLHELLRPVLRGHFQPALLARFQTVIYRPLPAGALRAIVGMKLGQVSQR
LACHYGITTTLSESLFDALTEACLLPDTGARNVDSLLNQQILPALSQQLLSHMAAGQKPRQVTLGYHEEEGVVMAFDEGT
ISDE
>Mature_884_residues
MENPASLLRRLNPCCARAMEGAASLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEWDMDALWQDLLSWLDKQPRSV
RHRPQLSHHTLRLMQEAWLIASLSGEAQIRSVHLLMALVEKQNLIQCDGLWPLLTLGQRQLERLRPLLDAQSDERPPAQQ
EAALAQPHGGDVEFVGRPAGSELNADGLNPALQNALDKFTLDVTAKARDGLIDPVFGRDTEIRQMVDILSRRRKNNPILV
GEPGVGKTALVEGLALCIAEGNVPDALKPVSVRTLDLGLLQAGAGVKGEFEQRLKNIIEAVQQSPSPVLLFIDEAHTIIG
AGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKSRYADHHGVHI
TDDAVRAAVTLSRRYLTGRQLPDKAVDLLDTASARLRMSLDTVPEPLTRMKAQLTALAMEKQALLEDIALGNSARGDRLA
AIEQEEIRLILALDTLETQYGQELQLTEALLACRRDISRQAEISDLQTALIAVQQGNPLLGLDVDVRTVATVIADWTGVP
LSSLMKDEQTELLSLEESLGKRVVGQEAALSAIARRLRAAKTGLTPENGPQGVFLLVGPSGTGKTETALALADALFGGEK
ALITINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGVMRDGEGREI
DFRNTVILMTANLGSDLLMQLLDEQPEASESDLHELLRPVLRGHFQPALLARFQTVIYRPLPAGALRAIVGMKLGQVSQR
LACHYGITTTLSESLFDALTEACLLPDTGARNVDSLLNQQILPALSQQLLSHMAAGQKPRQVTLGYHEEEGVVMAFDEGT
ISDE

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=301, Percent_Identity=31.8936877076412, Blast_Score=157, Evalue=4e-38,
Organism=Escherichia coli, GI1788943, Length=696, Percent_Identity=44.683908045977, Blast_Score=555, Evalue=1e-159,
Organism=Escherichia coli, GI1787109, Length=438, Percent_Identity=36.5296803652968, Blast_Score=248, Evalue=1e-66,
Organism=Saccharomyces cerevisiae, GI6320464, Length=690, Percent_Identity=40.8695652173913, Blast_Score=467, Evalue=1e-132,
Organism=Saccharomyces cerevisiae, GI6323002, Length=896, Percent_Identity=33.8169642857143, Blast_Score=445, Evalue=1e-125,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 96916; Mature: 96916

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00870 CLPAB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENPASLLRRLNPCCARAMEGAASLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEW
CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEHHHCC
DMDALWQDLLSWLDKQPRSVRHRPQLSHHTLRLMQEAWLIASLSGEAQIRSVHLLMALVE
CHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHH
KQNLIQCDGLWPLLTLGQRQLERLRPLLDAQSDERPPAQQEAALAQPHGGDVEFVGRPAG
HCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCC
SELNADGLNPALQNALDKFTLDVTAKARDGLIDPVFGRDTEIRQMVDILSRRRKNNPILV
CCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
GEPGVGKTALVEGLALCIAEGNVPDALKPVSVRTLDLGLLQAGAGVKGEFEQRLKNIIEA
ECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHHH
VQQSPSPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFER
HHCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DAALERRFQMVKVDEPDDDTACLMLRGLKSRYADHHGVHITDDAVRAAVTLSRRYLTGRQ
HHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCC
LPDKAVDLLDTASARLRMSLDTVPEPLTRMKAQLTALAMEKQALLEDIALGNSARGDRLA
CCHHHHHHHHHCCHHEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
AIEQEEIRLILALDTLETQYGQELQLTEALLACRRDISRQAEISDLQTALIAVQQGNPLL
EECHHHEEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEE
GLDVDVRTVATVIADWTGVPLSSLMKDEQTELLSLEESLGKRVVGQEAALSAIARRLRAA
ECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
KTGLTPENGPQGVFLLVGPSGTGKTETALALADALFGGEKALITINLSEYQEPHTVSQLK
HCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCHHHHHC
GSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGVMRDGEGREI
CCCCCEEECCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
DFRNTVILMTANLGSDLLMQLLDEQPEASESDLHELLRPVLRGHFQPALLARFQTVIYRP
ECCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
LPAGALRAIVGMKLGQVSQRLACHYGITTTLSESLFDALTEACLLPDTGARNVDSLLNQQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ILPALSQQLLSHMAAGQKPRQVTLGYHEEEGVVMAFDEGTISDE
HHHHHHHHHHHHHHCCCCCCEEECCEECCCCEEEEECCCCCCCC
>Mature Secondary Structure
MENPASLLRRLNPCCARAMEGAASLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEW
CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEHHHCC
DMDALWQDLLSWLDKQPRSVRHRPQLSHHTLRLMQEAWLIASLSGEAQIRSVHLLMALVE
CHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHH
KQNLIQCDGLWPLLTLGQRQLERLRPLLDAQSDERPPAQQEAALAQPHGGDVEFVGRPAG
HCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCC
SELNADGLNPALQNALDKFTLDVTAKARDGLIDPVFGRDTEIRQMVDILSRRRKNNPILV
CCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
GEPGVGKTALVEGLALCIAEGNVPDALKPVSVRTLDLGLLQAGAGVKGEFEQRLKNIIEA
ECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHHH
VQQSPSPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFER
HHCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DAALERRFQMVKVDEPDDDTACLMLRGLKSRYADHHGVHITDDAVRAAVTLSRRYLTGRQ
HHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCC
LPDKAVDLLDTASARLRMSLDTVPEPLTRMKAQLTALAMEKQALLEDIALGNSARGDRLA
CCHHHHHHHHHCCHHEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
AIEQEEIRLILALDTLETQYGQELQLTEALLACRRDISRQAEISDLQTALIAVQQGNPLL
EECHHHEEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEE
GLDVDVRTVATVIADWTGVPLSSLMKDEQTELLSLEESLGKRVVGQEAALSAIARRLRAA
ECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
KTGLTPENGPQGVFLLVGPSGTGKTETALALADALFGGEKALITINLSEYQEPHTVSQLK
HCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCHHHHHC
GSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGVMRDGEGREI
CCCCCEEECCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
DFRNTVILMTANLGSDLLMQLLDEQPEASESDLHELLRPVLRGHFQPALLARFQTVIYRP
ECCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
LPAGALRAIVGMKLGQVSQRLACHYGITTTLSESLFDALTEACLLPDTGARNVDSLLNQQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ILPALSQQLLSHMAAGQKPRQVTLGYHEEEGVVMAFDEGTISDE
HHHHHHHHHHHHHHCCCCCCEEECCEECCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]