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The map label for this gene is rutE [H]

Identifier: 238894073

GI number: 238894073

Start: 1970304

End: 1970894

Strand: Reverse

Name: rutE [H]

Synonym: KP1_2022

Alternate gene names: 238894073

Gene position: 1970894-1970304 (Counterclockwise)

Preceding gene: 238894074

Following gene: 238894072

Centisome position: 37.55

GC content: 62.77

Gene sequence:

>591_bases
ATGAACGACGCGATAAACCACACGGCCTGCGAGACGCTGTTTACCCAGGCCCGGACCCACAACGGCTGGCTGGATAAGCC
GGTGAGCGATGCGCAGCTGCAGGCCGTCTGGGACCTGATGAAAATGGGGCCGACTTCCGCCAACTGTTCGCCAGCGCGCA
TCGTGTTCGTGCGCAGCGCGGAAGGCAAAGAGAAACTTCGCCCGACGCTCTCCAGCGGCAATCTGCAGAAAACCATGCAG
GCGCCGGTGACCGCCATCGTGGCGTGGGATAGCGCCTTCTACGACCGGCTGCCGACCCTGTTTCCCCACGGTGACGCCCG
CAGCTGGTTTACCTCCAGCCCGCAGCTGGCGGAAGAGACCGCGTTTCGCAACAGCTCCCTGCAGGCGGCGTATCTGATTT
TTGCCTGCCGGGCGCTGGGCCTCGACACCGGGCCAATGTCTGGTTTTGACCGGGAAAAAGTCGACGCGGCATTTTTTGCC
GACAACGGCTGGAAAAGCAACCTGCTGGTGAACATCGGCTATGGCGACCCCGGCAAGCTGTACGGCCGCCTGCCGCGCCT
GTCCTTTGATGAAGCCTGCCTGCTGGCATAA

Upstream 100 bases:

>100_bases
CGTGGGGCGGCCATGCCTGTAACGTCACCGACGCCGATACCTTTAATACCATTTTACGCGACGGGCTGTCCGCTATGCTG
CCGGTCGCCAGGGAGACCCG

Downstream 100 bases:

>100_bases
GGAGTTTACGATGGAGTTAACGGACAAAACGAGTTTCCGTGACGCCATGGCCCACGTCGGCGCCGCGGTTAACATTATTA
CCACCGATGGCCCGGCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MNDAINHTACETLFTQARTHNGWLDKPVSDAQLQAVWDLMKMGPTSANCSPARIVFVRSAEGKEKLRPTLSSGNLQKTMQ
APVTAIVAWDSAFYDRLPTLFPHGDARSWFTSSPQLAEETAFRNSSLQAAYLIFACRALGLDTGPMSGFDREKVDAAFFA
DNGWKSNLLVNIGYGDPGKLYGRLPRLSFDEACLLA

Sequences:

>Translated_196_residues
MNDAINHTACETLFTQARTHNGWLDKPVSDAQLQAVWDLMKMGPTSANCSPARIVFVRSAEGKEKLRPTLSSGNLQKTMQ
APVTAIVAWDSAFYDRLPTLFPHGDARSWFTSSPQLAEETAFRNSSLQAAYLIFACRALGLDTGPMSGFDREKVDAAFFA
DNGWKSNLLVNIGYGDPGKLYGRLPRLSFDEACLLA
>Mature_196_residues
MNDAINHTACETLFTQARTHNGWLDKPVSDAQLQAVWDLMKMGPTSANCSPARIVFVRSAEGKEKLRPTLSSGNLQKTMQ
APVTAIVAWDSAFYDRLPTLFPHGDARSWFTSSPQLAEETAFRNSSLQAAYLIFACRALGLDTGPMSGFDREKVDAAFFA
DNGWKSNLLVNIGYGDPGKLYGRLPRLSFDEACLLA

Specific function: May reduce toxic product malonic semialdehyde to 3- hydroxypropionic acid, which is excreted [H]

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family. HadB/RutE subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787243, Length=195, Percent_Identity=77.4358974358974, Blast_Score=317, Evalue=4e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: =1.1.1.298 [H]

Molecular weight: Translated: 21539; Mature: 21539

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDAINHTACETLFTQARTHNGWLDKPVSDAQLQAVWDLMKMGPTSANCSPARIVFVRSA
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
EGKEKLRPTLSSGNLQKTMQAPVTAIVAWDSAFYDRLPTLFPHGDARSWFTSSPQLAEET
CCHHHHCCCCCCCCHHHHHHCCEEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
AFRNSSLQAAYLIFACRALGLDTGPMSGFDREKVDAAFFADNGWKSNLLVNIGYGDPGKL
HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCEEEEECCCCCCCEEEECCCCCCHHH
YGRLPRLSFDEACLLA
HHCCCCCCCCCHHHCC
>Mature Secondary Structure
MNDAINHTACETLFTQARTHNGWLDKPVSDAQLQAVWDLMKMGPTSANCSPARIVFVRSA
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
EGKEKLRPTLSSGNLQKTMQAPVTAIVAWDSAFYDRLPTLFPHGDARSWFTSSPQLAEET
CCHHHHCCCCCCCCHHHHHHCCEEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
AFRNSSLQAAYLIFACRALGLDTGPMSGFDREKVDAAFFADNGWKSNLLVNIGYGDPGKL
HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCEEEEECCCCCCCEEEECCCCCCHHH
YGRLPRLSFDEACLLA
HHCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA