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The map label for this gene is ycdH [H]

Identifier: 238894072

GI number: 238894072

Start: 1969799

End: 1970329

Strand: Reverse

Name: ycdH [H]

Synonym: KP1_2021

Alternate gene names: 238894072

Gene position: 1970329-1969799 (Counterclockwise)

Preceding gene: 238894073

Following gene: 238894071

Centisome position: 37.54

GC content: 63.65

Gene sequence:

>531_bases
TTGATGAAGCCTGCCTGCTGGCATAAGGAGTTTACGATGGAGTTAACGGACAAAACGAGTTTCCGTGACGCCATGGCCCA
CGTCGGCGCCGCGGTTAACATTATTACCACCGATGGCCCGGCGGGCCGGGCGGGATTCACCGCCAGCGCGGTCTGCAGCG
TTACCGACACGCCGCCGACCCTGCTGGTCTGCCTGAACCGCTCGGCTTCGGTGTGGCCGGTGTTCAGCGAACACCACACG
CTGTGCGTCAATACCCTGGCGGCCGGACAGGAGGCCCTGTCGACGCTGTTTGGCGGTAAAACGGCAATGGACGAGCGTTT
TGCCGCCGCCGACTGGCAGACCGGCGCCACCGGCTGTCCGCGGCTGGAGGCGGCTCTGGTCAGCTTTGACTGCCGCATCG
ACCAGCGCGTCAGCGTCGGGACGCACGACATTCTGTTTTGTCACGTCGTGGCCATTACCCGTCACCCGGAGCCCCGGGGA
CTGATGTGGTTTGACCGCGGCTATCACACGCTTATGCGACCCGCTTGTTAA

Upstream 100 bases:

>100_bases
GCGGCATTTTTTGCCGACAACGGCTGGAAAAGCAACCTGCTGGTGAACATCGGCTATGGCGACCCCGGCAAGCTGTACGG
CCGCCTGCCGCGCCTGTCCT

Downstream 100 bases:

>100_bases
CCTTTAACCCGGGATATCATCATGGCACTCTTCGATTTTCCTCGCTGGAAGCTGACCTCTCCTGCCGCCGAATCCGGCGT
TGTCGCCCCCGATGAACGCT

Product: putative flavin:NADH reductase

Products: NA

Alternate protein names: FMN reductase; NAD(P)H:flavin oxidoreductase [H]

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MMKPACWHKEFTMELTDKTSFRDAMAHVGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRSASVWPVFSEHHT
LCVNTLAAGQEALSTLFGGKTAMDERFAAADWQTGATGCPRLEAALVSFDCRIDQRVSVGTHDILFCHVVAITRHPEPRG
LMWFDRGYHTLMRPAC

Sequences:

>Translated_176_residues
MMKPACWHKEFTMELTDKTSFRDAMAHVGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRSASVWPVFSEHHT
LCVNTLAAGQEALSTLFGGKTAMDERFAAADWQTGATGCPRLEAALVSFDCRIDQRVSVGTHDILFCHVVAITRHPEPRG
LMWFDRGYHTLMRPAC
>Mature_176_residues
MMKPACWHKEFTMELTDKTSFRDAMAHVGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRSASVWPVFSEHHT
LCVNTLAAGQEALSTLFGGKTAMDERFAAADWQTGATGCPRLEAALVSFDCRIDQRVSVGTHDILFCHVVAITRHPEPRG
LMWFDRGYHTLMRPAC

Specific function: Catalyzes the reduction of FMN to FMNH2 which is used to reduce pyrimidine by RutA via the Rut pathway [H]

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the non-flavoprotein flavin reductase family. RutF subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081819, Length=164, Percent_Identity=78.0487804878049, Blast_Score=268, Evalue=2e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019917
- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: =1.5.1.29 [H]

Molecular weight: Translated: 19155; Mature: 19155

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKPACWHKEFTMELTDKTSFRDAMAHVGAAVNIITTDGPAGRAGFTASAVCSVTDTPPT
CCCCCCCCCEEEEEECCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCE
LLVCLNRSASVWPVFSEHHTLCVNTLAAGQEALSTLFGGKTAMDERFAAADWQTGATGCP
EEEEECCCCCCCEECCCCCEEEHHHHHCCHHHHHHHHCCCCHHHCHHCCCCCCCCCCCCC
RLEAALVSFDCRIDQRVSVGTHDILFCHVVAITRHPEPRGLMWFDRGYHTLMRPAC
HHHHEEEEECCCCCCEECCCCCHHEEEEEEEEECCCCCCCEEEECCCCHHHCCCCC
>Mature Secondary Structure
MMKPACWHKEFTMELTDKTSFRDAMAHVGAAVNIITTDGPAGRAGFTASAVCSVTDTPPT
CCCCCCCCCEEEEEECCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCE
LLVCLNRSASVWPVFSEHHTLCVNTLAAGQEALSTLFGGKTAMDERFAAADWQTGATGCP
EEEEECCCCCCCEECCCCCEEEHHHHHCCHHHHHHHHCCCCHHHCHHCCCCCCCCCCCCC
RLEAALVSFDCRIDQRVSVGTHDILFCHVVAITRHPEPRGLMWFDRGYHTLMRPAC
HHHHEEEEECCCCCCEECCCCCHHEEEEEEEEECCCCCCCEEEECCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA