| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is insN [H]
Identifier: 238028965
GI number: 238028965
Start: 3899839
End: 3900156
Strand: Reverse
Name: insN [H]
Synonym: bglu_1g34340
Alternate gene names: 238028965
Gene position: 3900156-3899839 (Counterclockwise)
Preceding gene: 238028966
Following gene: 238028963
Centisome position: 99.84
GC content: 59.43
Gene sequence:
>318_bases ATGCTCGCCATGGAGAGGTGTCTGATGCCGAAGCAACGTCGCTCGTTTTCCCCCGAGTTCAAACAGCAAGCAGCCAGCCT GGTGCTTGACCAGGGCTATAACTTTTCAGAGGCGAGCCGTTCGGTCGGCGTCGGCGAGACGGTGCTGCGCCGCTGGGTGC AGCAACTTCAGATGGAACGCCAGGGCGTCACGCCGCAGGGCAAGGCAATCACGCCGGATCAACAGCGTATTCAGCAACTC GAGGCGCGTATCGAACGCCTCGAGCGTGAGAAGGCCATTTTAAGAGGCCAGTTCAAAAACCCTGCTCAGCTCGTCTGA
Upstream 100 bases:
>100_bases ACACGTTTCAGTACACGTGATGACCGTGTACTGAAAACCGTGTACTAACCATGCCCAGAATGTAGTGGCCTAATGAACCC GGACACTGATTTAGGCGAGA
Downstream 100 bases:
>100_bases AGATGTTCCAACAGATGATCGAGCAGCCAAGTTTGAGGAATGCTTCGTGAATGTAGGCACTTCGCTCGAAGCGAGTGCGT AGGCGCCGGAAATTGTGGAG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MLAMERCLMPKQRRSFSPEFKQQAASLVLDQGYNFSEASRSVGVGETVLRRWVQQLQMERQGVTPQGKAITPDQQRIQQL EARIERLEREKAILRGQFKNPAQLV
Sequences:
>Translated_105_residues MLAMERCLMPKQRRSFSPEFKQQAASLVLDQGYNFSEASRSVGVGETVLRRWVQQLQMERQGVTPQGKAITPDQQRIQQL EARIERLEREKAILRGQFKNPAQLV >Mature_105_residues MLAMERCLMPKQRRSFSPEFKQQAASLVLDQGYNFSEASRSVGVGETVLRRWVQQLQMERQGVTPQGKAITPDQQRIQQL EARIERLEREKAILRGQFKNPAQLV
Specific function: Involved in the transposition of the insertion sequence IS911 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 12142; Mature: 12142
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAMERCLMPKQRRSFSPEFKQQAASLVLDQGYNFSEASRSVGVGETVLRRWVQQLQMER CCCHHHHCCCHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH QGVTPQGKAITPDQQRIQQLEARIERLEREKAILRGQFKNPAQLV HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLAMERCLMPKQRRSFSPEFKQQAASLVLDQGYNFSEASRSVGVGETVLRRWVQQLQMER CCCHHHHCCCHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH QGVTPQGKAITPDQQRIQQLEARIERLEREKAILRGQFKNPAQLV HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2163395 [H]