| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028963
Identifier: 238028963
GI number: 238028963
Start: 3896648
End: 3897382
Strand: Reverse
Name: 238028963
Synonym: bglu_1g34290
Alternate gene names: NA
Gene position: 3897382-3896648 (Counterclockwise)
Preceding gene: 238028965
Following gene: 238028960
Centisome position: 99.77
GC content: 73.61
Gene sequence:
>735_bases GTGCCGGCTGCGTCGCCCGTCGAACAGCGCGCATCGCACGGCAACGGCGGCTCGGTGTCGATCAACGTAGCGCCGGATGA GAGACTCTCGGCACCGCTCCCGCTCCCGCAGCCGGAAGGCCTGGCTACGCGGATCGGCGATCGCGCGCCCTATGTCGACG GGGCGGCCGCCACCAGTTCGTTGACGGGCGCCGTGACGCAACTGGCCTCCACCAGCTTGGCGAGCGGGTTCGGCGCGGCC AGCGGCGGGCTGTGGACGGCGGGCGCGATCATGGCGGAAGTCGGCAATCGCGATCCCGCCCCCGTCAACTGGATCGCGAG CGGCGCCAATGCGCTGAACGGCGGCGCGGGCCTCGCCAGCGGCGCGGCCGCGCTCACCACCGGCGAGACCCAGACGGCGT TCGGCTATACCTCGGCGGCCGCCTGGGGCGCCAGCGCGGTGACCTCGATGGCGCATGCCTGGTTCGACACCTCCCGCAAT AGGGCCGCGCGCGGCTTTCAGGCCCTCAGCGGGCTGCTGAACGTCGCCGCCGCCGGACTCTCGGCGAAAGCCGTGCAGGC CTCGTCGGAGAACGACACCGGCAGCGCGGCCTGGTACGGCGGCGCCTCGTCGGTGGCATGGGGGCTGGGCGCGCTGTCGG CCTACGCGTCGATTCGGGCGGGCAAGACCCCGACGGCCGTGCATCCGGAGAACAACGCGGCGGGCCGGTCGCCCGAGGCA GCGCTGTCGGTCTAG
Upstream 100 bases:
>100_bases GCCCTTGTCACCCCTGATGGGGGGGCAGGACGTCCCCCACGAGAGACGGGCCAGCCAGGCGCTGTCGGCACCACTGCCTC ACCAGTCGAGGACCGAGCAG
Downstream 100 bases:
>100_bases GCTGGCAGTTCGAACGGCTCGCGTGGCGTGGGGGGCGGCATATCGGGCGCGCGCCGGACTCGGCCGCTGGTCCGGCCGCG TCGTCGTCGCCATCGCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MPAASPVEQRASHGNGGSVSINVAPDERLSAPLPLPQPEGLATRIGDRAPYVDGAAATSSLTGAVTQLASTSLASGFGAA SGGLWTAGAIMAEVGNRDPAPVNWIASGANALNGGAGLASGAAALTTGETQTAFGYTSAAAWGASAVTSMAHAWFDTSRN RAARGFQALSGLLNVAAAGLSAKAVQASSENDTGSAAWYGGASSVAWGLGALSAYASIRAGKTPTAVHPENNAAGRSPEA ALSV
Sequences:
>Translated_244_residues MPAASPVEQRASHGNGGSVSINVAPDERLSAPLPLPQPEGLATRIGDRAPYVDGAAATSSLTGAVTQLASTSLASGFGAA SGGLWTAGAIMAEVGNRDPAPVNWIASGANALNGGAGLASGAAALTTGETQTAFGYTSAAAWGASAVTSMAHAWFDTSRN RAARGFQALSGLLNVAAAGLSAKAVQASSENDTGSAAWYGGASSVAWGLGALSAYASIRAGKTPTAVHPENNAAGRSPEA ALSV >Mature_243_residues PAASPVEQRASHGNGGSVSINVAPDERLSAPLPLPQPEGLATRIGDRAPYVDGAAATSSLTGAVTQLASTSLASGFGAAS GGLWTAGAIMAEVGNRDPAPVNWIASGANALNGGAGLASGAAALTTGETQTAFGYTSAAAWGASAVTSMAHAWFDTSRNR AARGFQALSGLLNVAAAGLSAKAVQASSENDTGSAAWYGGASSVAWGLGALSAYASIRAGKTPTAVHPENNAAGRSPEAA LSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23777; Mature: 23646
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAASPVEQRASHGNGGSVSINVAPDERLSAPLPLPQPEGLATRIGDRAPYVDGAAATSS CCCCCCHHHHHCCCCCCEEEEEECCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHH LTGAVTQLASTSLASGFGAASGGLWTAGAIMAEVGNRDPAPVNWIASGANALNGGAGLAS HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCC GAAALTTGETQTAFGYTSAAAWGASAVTSMAHAWFDTSRNRAARGFQALSGLLNVAAAGL CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC SAKAVQASSENDTGSAAWYGGASSVAWGLGALSAYASIRAGKTPTAVHPENNAAGRSPEA CHHHEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCH ALSV HCCC >Mature Secondary Structure PAASPVEQRASHGNGGSVSINVAPDERLSAPLPLPQPEGLATRIGDRAPYVDGAAATSS CCCCCHHHHHCCCCCCEEEEEECCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHH LTGAVTQLASTSLASGFGAASGGLWTAGAIMAEVGNRDPAPVNWIASGANALNGGAGLAS HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCC GAAALTTGETQTAFGYTSAAAWGASAVTSMAHAWFDTSRNRAARGFQALSGLLNVAAAGL CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC SAKAVQASSENDTGSAAWYGGASSVAWGLGALSAYASIRAGKTPTAVHPENNAAGRSPEA CHHHEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCH ALSV HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA