| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028960
Identifier: 238028960
GI number: 238028960
Start: 3892230
End: 3893126
Strand: Reverse
Name: 238028960
Synonym: bglu_1g34250
Alternate gene names: NA
Gene position: 3893126-3892230 (Counterclockwise)
Preceding gene: 238028963
Following gene: 238028958
Centisome position: 99.66
GC content: 69.45
Gene sequence:
>897_bases ATGCTCGACGCCGAGTATTTCGAGTACACGTCGTCGGCGAACCCGATCGGCGCGAAGCTGATTTCGCGCGTGCCGTACCG GAGCTTCGCCGCGTCGCTCTGCGATAGCGGGCCGACGCGCGTCGTCCCGCTCGACCTGTCCGCCGAGCTGGGCTGCGATT ATCCGGCCACCGGGCCGTGCCTGTTGGCGAGCTTCGTGCGCATCGTGGCGGGCGAGCAGGTGACGGTCGATCCGAACGCG ACTTCGCAGGTGTGCTACGTGATCGACGGCGCGGGCTCGGTCGCGCAGCGCGACAGCGCGTTCCGTTTCGGCCGGGGGGA TTTTTTCTCGCTGCCCGGCGGCGCGCCGGCGACACTTCGCGCCGATTCGACCGCGCGCCTCTACTACGTCAGCGATGCGC CGCTGCTCGCCTATCTGGGCGCCCGCGCCGCGCAACCGCGCTTCGCGCCGACGCTCTATCCGGCCGCCCGCGCCAGGGCC GAACTCGACAAGGTGGCGACGGCACCGGGCGCGGCGCGGCGCAACCGCGTGAGCGTGCTGCTCGGCAACCGCCGCTTTCC GCAGACGCGCACGGTCACGCATTCGATGTGGGCAATGTTCGGGACGATCGCGCCGAACAGCGTGCAGAAGCCGCACCGGC ACCAGTCGATCGCGCTCGATTTCATCCCGCACTGCCGGCCCGGCGTGTACACGCTGGTCGGCACGGAACTGGACGCGGCG GGCGATATCGTCGACGCCGAGCGCGTGGACTGGGCGCCGGGCATGGCGTTTGTCACGCCGCCCGGTTACTGGCATGCGCA CGTCAACGAATCGAACGAGTCTGCCTACGTCATCCCGCTGCAGGATGCGGGGCTGCAAACCTATCTGCGCGCGCTCGACA TTCGCTTCGCGCGTTGA
Upstream 100 bases:
>100_bases GCCGGAGACGGCCGCCCACCCCTTCCCCACATTCGACGGAGCCGGAACCATGCTGGACACGACCCTGCCCTTCACGCCGC AGTTCGGCGACGAGCGCGCC
Downstream 100 bases:
>100_bases GGGCCGGCAAGCCGGACGGCGGCCGCTGCGCGGGCCGAGTCGGGCCGCCCGCGCAGGGCGGCCGGCACGAACCCCCGCAA CCCACCGAGGCGGCGATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MLDAEYFEYTSSANPIGAKLISRVPYRSFAASLCDSGPTRVVPLDLSAELGCDYPATGPCLLASFVRIVAGEQVTVDPNA TSQVCYVIDGAGSVAQRDSAFRFGRGDFFSLPGGAPATLRADSTARLYYVSDAPLLAYLGARAAQPRFAPTLYPAARARA ELDKVATAPGAARRNRVSVLLGNRRFPQTRTVTHSMWAMFGTIAPNSVQKPHRHQSIALDFIPHCRPGVYTLVGTELDAA GDIVDAERVDWAPGMAFVTPPGYWHAHVNESNESAYVIPLQDAGLQTYLRALDIRFAR
Sequences:
>Translated_298_residues MLDAEYFEYTSSANPIGAKLISRVPYRSFAASLCDSGPTRVVPLDLSAELGCDYPATGPCLLASFVRIVAGEQVTVDPNA TSQVCYVIDGAGSVAQRDSAFRFGRGDFFSLPGGAPATLRADSTARLYYVSDAPLLAYLGARAAQPRFAPTLYPAARARA ELDKVATAPGAARRNRVSVLLGNRRFPQTRTVTHSMWAMFGTIAPNSVQKPHRHQSIALDFIPHCRPGVYTLVGTELDAA GDIVDAERVDWAPGMAFVTPPGYWHAHVNESNESAYVIPLQDAGLQTYLRALDIRFAR >Mature_298_residues MLDAEYFEYTSSANPIGAKLISRVPYRSFAASLCDSGPTRVVPLDLSAELGCDYPATGPCLLASFVRIVAGEQVTVDPNA TSQVCYVIDGAGSVAQRDSAFRFGRGDFFSLPGGAPATLRADSTARLYYVSDAPLLAYLGARAAQPRFAPTLYPAARARA ELDKVATAPGAARRNRVSVLLGNRRFPQTRTVTHSMWAMFGTIAPNSVQKPHRHQSIALDFIPHCRPGVYTLVGTELDAA GDIVDAERVDWAPGMAFVTPPGYWHAHVNESNESAYVIPLQDAGLQTYLRALDIRFAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32210; Mature: 32210
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDAEYFEYTSSANPIGAKLISRVPYRSFAASLCDSGPTRVVPLDLSAELGCDYPATGPC CCCCHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCHHCCCCCCCCCHH LLASFVRIVAGEQVTVDPNATSQVCYVIDGAGSVAQRDSAFRFGRGDFFSLPGGAPATLR HHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCHHHCCCCEECCCCCEEECCCCCCEEEE ADSTARLYYVSDAPLLAYLGARAAQPRFAPTLYPAARARAELDKVATAPGAARRNRVSVL CCCCEEEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEE LGNRRFPQTRTVTHSMWAMFGTIAPNSVQKPHRHQSIALDFIPHCRPGVYTLVGTELDAA ECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCC GDIVDAERVDWAPGMAFVTPPGYWHAHVNESNESAYVIPLQDAGLQTYLRALDIRFAR CCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHEECC >Mature Secondary Structure MLDAEYFEYTSSANPIGAKLISRVPYRSFAASLCDSGPTRVVPLDLSAELGCDYPATGPC CCCCHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCHHCCCCCCCCCHH LLASFVRIVAGEQVTVDPNATSQVCYVIDGAGSVAQRDSAFRFGRGDFFSLPGGAPATLR HHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCHHHCCCCEECCCCCEEECCCCCCEEEE ADSTARLYYVSDAPLLAYLGARAAQPRFAPTLYPAARARAELDKVATAPGAARRNRVSVL CCCCEEEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEE LGNRRFPQTRTVTHSMWAMFGTIAPNSVQKPHRHQSIALDFIPHCRPGVYTLVGTELDAA ECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCC GDIVDAERVDWAPGMAFVTPPGYWHAHVNESNESAYVIPLQDAGLQTYLRALDIRFAR CCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA