Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028958

Identifier: 238028958

GI number: 238028958

Start: 3891151

End: 3891501

Strand: Reverse

Name: 238028958

Synonym: bglu_1g34230

Alternate gene names: NA

Gene position: 3891501-3891151 (Counterclockwise)

Preceding gene: 238028960

Following gene: 238028957

Centisome position: 99.62

GC content: 65.81

Gene sequence:

>351_bases
ATGATCGGACGAATCGGTTTCGCGCTTGCGTTGATGGGCGGTGCGGCCACGGTGGCCCAGGCGGGCGGCGATGTCGTAGT
GAAGCCGCGCCAGGAAGTGCATCTGACGAAGGACGCCTGGGGCTGCCTGTCGAAGGACAACCTGGATTCGGTGCTGTCGC
ACGAGCGTGACGGCCAGGCGCAGGCGAAACAGCAATACTTCGACGACTATCGCTGCGTGAGCGTGCCGGACGGCGCGCGC
TTCCGCGTGGTCAGCGTCGATCGTGACGACGTGCAGTTCGTCAGCGCCGACAACAGCGACCAGCAGGGGCTCTGGACCGA
CGTGCGCTTCGTTCGACCGGTTCGGCCGTAG

Upstream 100 bases:

>100_bases
CGCGTTTTCTAGCATGGAGGGATGCGGTGCGGCCGATGTCTCGATGTCTTCGACCCATTGGCTCAACGAGCCGGCGCGCC
GCGCGTCAGGAGGGGACGAC

Downstream 100 bases:

>100_bases
TCGGTACGCCGTCGCGCCCCGATATCTCGACGCATCGGGCTGCCGCATCGCTTCGCTGCGGATTCCCCGGCTCGCCGCCG
CTTAGCCGGCCACGAGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MIGRIGFALALMGGAATVAQAGGDVVVKPRQEVHLTKDAWGCLSKDNLDSVLSHERDGQAQAKQQYFDDYRCVSVPDGAR
FRVVSVDRDDVQFVSADNSDQQGLWTDVRFVRPVRP

Sequences:

>Translated_116_residues
MIGRIGFALALMGGAATVAQAGGDVVVKPRQEVHLTKDAWGCLSKDNLDSVLSHERDGQAQAKQQYFDDYRCVSVPDGAR
FRVVSVDRDDVQFVSADNSDQQGLWTDVRFVRPVRP
>Mature_116_residues
MIGRIGFALALMGGAATVAQAGGDVVVKPRQEVHLTKDAWGCLSKDNLDSVLSHERDGQAQAKQQYFDDYRCVSVPDGAR
FRVVSVDRDDVQFVSADNSDQQGLWTDVRFVRPVRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12779; Mature: 12779

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRIGFALALMGGAATVAQAGGDVVVKPRQEVHLTKDAWGCLSKDNLDSVLSHERDGQA
CCCCHHHHHHHHCCCCEEHHCCCCEEECCCCCEEECCHHHCCCCCCCHHHHHCCCCCCHH
QAKQQYFDDYRCVSVPDGARFRVVSVDRDDVQFVSADNSDQQGLWTDVRFVRPVRP
HHHHHHCCCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCEECEEEECCCCC
>Mature Secondary Structure
MIGRIGFALALMGGAATVAQAGGDVVVKPRQEVHLTKDAWGCLSKDNLDSVLSHERDGQA
CCCCHHHHHHHHCCCCEEHHCCCCEEECCCCCEEECCHHHCCCCCCCHHHHHCCCCCCHH
QAKQQYFDDYRCVSVPDGARFRVVSVDRDDVQFVSADNSDQQGLWTDVRFVRPVRP
HHHHHHCCCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCEECEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA