| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028758
Identifier: 238028758
GI number: 238028758
Start: 3658519
End: 3659418
Strand: Reverse
Name: 238028758
Synonym: bglu_1g32220
Alternate gene names: NA
Gene position: 3659418-3658519 (Counterclockwise)
Preceding gene: 238028759
Following gene: 238028757
Centisome position: 93.67
GC content: 77.89
Gene sequence:
>900_bases ATGACCGATACGCCCGGCTCCAACCCGTTCCCCGGCTTCGCAGGCTTCAAGCCGTCCGACATGCTCGACCGGATGTGGGA CATGATGCGTCTCTCGCCGTTCGGCGCCGGCATGGGCGCGGTGCCCGGCCAGGGACTGCCGCCGTCGCTGTCGGCGATGT CGGACATGATGGCGCCGCTCGCGAGCGTCGAGGAACTCGACAAGCGCATCACCGACCTGCGCGCCGTCGAGCAATGGCTG AAGCTCAATCTCGGCATGCTGCAATCGGCGATCCAGGCGCTCGAGGTGCAGCGCGCCACGCTCGCCACGCTGCGTGCGTT CGGCGCGCTCGCGCAGGAGTCGATGGCCGCCGCCGAGGCGGCCGTCGCATCCGGCGCCGAGGCCAAGCGCACCGCCGCGC CGGCCTCGCCGTTCGCGTCGCCGTTCGGGGCCTCGCCGTTCGGCGCGGCGGCGCCGGCGTCGCCCGAAGCGGGCCGGGCG GCAGGTGCGGCCGGCGAGGCGGCCAAGGCCGGCCCCGCCTCCGGCAATGCCGGCGCCGCCGACTCGGGCCCGGCGCCTGG TGCCGGGGTACCGCCGACGGGCGCCGAGGCATTCGATCCGGCCGGCTGGTGGAACCTGCTGCAGTCGCAGTTCAGCCAGC TTGCCAATTTCGCGATGACGCAGCCCGCTGCCGCTGCCGGGGCCGGCGAACCGAAGCCGGCCCCGGCGGCCGAGCCGCCG CGCGCGCGCAAGCCGGCCACGCGCCGCGCGGCGCCGCCGAAGCCGCGCGCGCCGCGCACCGGGGCGTCCGGGGAGGCCCC CGACGCGGCGCCGGACCCGGCGCCGCCGCCGGACCCGGCGCCGCCGCCGGACCCGGCGCCGCCGCCGGCCGCGAAGGCGG CGCGCAAGCGCGGCCCGTGA
Upstream 100 bases:
>100_bases GCCGCGTTTCCCGTTCGCGCATCGCGCCCGCGCGCTATGATCGAATCATGCGCCGTCGCCCGACGCCCGCCCAATCGAAC CCGTCACGAAGGATTGCCGC
Downstream 100 bases:
>100_bases TGCGCGCCGTTCCCACCCTCTGAGGCTGCCGTGCGGCTCGCGCTCGTTCTGATGGGAGGCGGCGCGCGCGCCGCCTATCA GGCCGGCGTGCTGCAGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTDTPGSNPFPGFAGFKPSDMLDRMWDMMRLSPFGAGMGAVPGQGLPPSLSAMSDMMAPLASVEELDKRITDLRAVEQWL KLNLGMLQSAIQALEVQRATLATLRAFGALAQESMAAAEAAVASGAEAKRTAAPASPFASPFGASPFGAAAPASPEAGRA AGAAGEAAKAGPASGNAGAADSGPAPGAGVPPTGAEAFDPAGWWNLLQSQFSQLANFAMTQPAAAAGAGEPKPAPAAEPP RARKPATRRAAPPKPRAPRTGASGEAPDAAPDPAPPPDPAPPPDPAPPPAAKAARKRGP
Sequences:
>Translated_299_residues MTDTPGSNPFPGFAGFKPSDMLDRMWDMMRLSPFGAGMGAVPGQGLPPSLSAMSDMMAPLASVEELDKRITDLRAVEQWL KLNLGMLQSAIQALEVQRATLATLRAFGALAQESMAAAEAAVASGAEAKRTAAPASPFASPFGASPFGAAAPASPEAGRA AGAAGEAAKAGPASGNAGAADSGPAPGAGVPPTGAEAFDPAGWWNLLQSQFSQLANFAMTQPAAAAGAGEPKPAPAAEPP RARKPATRRAAPPKPRAPRTGASGEAPDAAPDPAPPPDPAPPPDPAPPPAAKAARKRGP >Mature_298_residues TDTPGSNPFPGFAGFKPSDMLDRMWDMMRLSPFGAGMGAVPGQGLPPSLSAMSDMMAPLASVEELDKRITDLRAVEQWLK LNLGMLQSAIQALEVQRATLATLRAFGALAQESMAAAEAAVASGAEAKRTAAPASPFASPFGASPFGAAAPASPEAGRAA GAAGEAAKAGPASGNAGAADSGPAPGAGVPPTGAEAFDPAGWWNLLQSQFSQLANFAMTQPAAAAGAGEPKPAPAAEPPR ARKPATRRAAPPKPRAPRTGASGEAPDAAPDPAPPPDPAPPPDPAPPPAAKAARKRGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29766; Mature: 29634
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTPGSNPFPGFAGFKPSDMLDRMWDMMRLSPFGAGMGAVPGQGLPPSLSAMSDMMAPL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ASVEELDKRITDLRAVEQWLKLNLGMLQSAIQALEVQRATLATLRAFGALAQESMAAAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVASGAEAKRTAAPASPFASPFGASPFGAAAPASPEAGRAAGAAGEAAKAGPASGNAGAA HHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHCCCCCCCCCCCC DSGPAPGAGVPPTGAEAFDPAGWWNLLQSQFSQLANFAMTQPAAAAGAGEPKPAPAAEPP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCC RARKPATRRAAPPKPRAPRTGASGEAPDAAPDPAPPPDPAPPPDPAPPPAAKAARKRGP CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure TDTPGSNPFPGFAGFKPSDMLDRMWDMMRLSPFGAGMGAVPGQGLPPSLSAMSDMMAPL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ASVEELDKRITDLRAVEQWLKLNLGMLQSAIQALEVQRATLATLRAFGALAQESMAAAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVASGAEAKRTAAPASPFASPFGASPFGAAAPASPEAGRAAGAAGEAAKAGPASGNAGAA HHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHCCCCCCCCCCCC DSGPAPGAGVPPTGAEAFDPAGWWNLLQSQFSQLANFAMTQPAAAAGAGEPKPAPAAEPP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCC RARKPATRRAAPPKPRAPRTGASGEAPDAAPDPAPPPDPAPPPDPAPPPAAKAARKRGP CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA