| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028757
Identifier: 238028757
GI number: 238028757
Start: 3657214
End: 3658488
Strand: Reverse
Name: 238028757
Synonym: bglu_1g32210
Alternate gene names: NA
Gene position: 3658488-3657214 (Counterclockwise)
Preceding gene: 238028758
Following gene: 238028756
Centisome position: 93.65
GC content: 74.9
Gene sequence:
>1275_bases GTGCGGCTCGCGCTCGTTCTGATGGGAGGCGGCGCGCGCGCCGCCTATCAGGCCGGCGTGCTGCAGGCGCTGGCCGAGAT CGCGCACCAGGTGCAGCCGGCGCGCCGCGAACTGCCGTTCGCGATCGTCTGCGGCTCCTCGGCGGGCGCGATCAACGCGG CCGCGATCGCCAGCCACGCCGACGATTTCGCGCGCGGCGCGGCACGCCTGCTGTCGTTCTGGGAGCACCTGCGCGCCGAG ATGATCTACCGCACCGACTGGCTCGGCGTGGCGGGCGCGGGCGCGCGCTGGCTGGCCGCGATGAGCATCGGCTGGGCGGC GCGCCGCGCGCCGCGCGGGCTGTTGGACAACGCGCCGCTGGCCGACCTGCTGCGGCGCGAGCTCGATTTCCACCGGATCG GCCGGATGCTCGGCGCGCGCCGGCTGCACGCGCTGTCGGTCACCGCGCTCAGCTACACGAGCGGGCGCCACCTGACGTTC TACGCCGGCAGCGAGCCGATCCACGCATGGCGGCGCGCGCAGCGCACGGCCCGCATGGTCGATCTGTCGGCCGCGCACCT GCTCGCCTCGTCGGCGATTCCGTTCGTGTTCCCGGCCGTGCCGCTCGTGATCGACGGGCGCATCGAGTATTTCGGCGACG GCTCGATCCGCCAGATCGCGCCGCTCTCGCCGGCGATCCATTTCGGCGGCGACCGGATCGTCGTGATCGGCGCGGCGGCC GCGCGCCCCGAGGTGCCGGCCGCCAACGGCCACGCGCTCGGCTATCCGTCGCTCGCGCAGATCGGCCAGCAGGTGCTCGC GAGCGTGTTCCTCGATTCGATCGGCACCGACATCGAGCGCATCGAGCACGTCAACCGCGTGGTCGAGCATCTGCCGCGCC AGATCGAGCCCGAGAGCGGCTGGCGTCACGTCGACGTGCTCGCGATCGCGCCGTCCGAGCGCATCGAGCTGATCGCCGCC AAGCACCTGCGGCGGCTGCCGTTGACGGTGCGCGGGCTGCTCGGCGCGATCGGCGGCAACCAGCCGGCCGGGGCCTCGTT TGCCAGCTATCTGCTGTTCGAGGCCGAGTTCACCCGCGAGCTGATCGCGCTCGGCCGTGCCGACGCGCTGCGGCAGCGCG AGACGCTGGCGGCCTGGATCGCCTCGGCGAGCCCGGGCGGCGGCCCGCCGGCGGCGGCGCAGGGGCCGCCGGCCGCCGCC GGTACGTGGGGCGCCGCGGCGGCACCCGTTTGCCCATCGGCCGGTTCGCCAGGCGAACGCGGCGGCCGGCGCTGA
Upstream 100 bases:
>100_bases GGACCCGGCGCCGCCGCCGGACCCGGCGCCGCCGCCGGCCGCGAAGGCGGCGCGCAAGCGCGGCCCGTGATGCGCGCCGT TCCCACCCTCTGAGGCTGCC
Downstream 100 bases:
>100_bases GCCGGGCCGGCTGCGCGCCGTATGCTGCGGCGCAGCGCGGCGGCGTTGTTTTATGTGCGACGATTTGCCGCATTCCGTCG TGTTCGTGTCGCGGATCGGT
Product: patatin family phospholipase
Products: NA
Alternate protein names: Patatin Family Protein; Alpha-Beta Hydrolase Family Esterase; Phospholipase Patatin Family; Patatin-Like Phospholipase Family; Patatin-Like Phospholipase; Patatin Family Phospholipase; Patatin Like Phospholipase; Patatin-Like Phospholipase Family Protein; Lipid Acyl Hydrolase; Esterase Of Alpha-Beta Hydrolase Superfamily Protein; Phospholipase Patatin Family Protein; Alpha-Beta Hydrolase Superfamily Protein
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MRLALVLMGGGARAAYQAGVLQALAEIAHQVQPARRELPFAIVCGSSAGAINAAAIASHADDFARGAARLLSFWEHLRAE MIYRTDWLGVAGAGARWLAAMSIGWAARRAPRGLLDNAPLADLLRRELDFHRIGRMLGARRLHALSVTALSYTSGRHLTF YAGSEPIHAWRRAQRTARMVDLSAAHLLASSAIPFVFPAVPLVIDGRIEYFGDGSIRQIAPLSPAIHFGGDRIVVIGAAA ARPEVPAANGHALGYPSLAQIGQQVLASVFLDSIGTDIERIEHVNRVVEHLPRQIEPESGWRHVDVLAIAPSERIELIAA KHLRRLPLTVRGLLGAIGGNQPAGASFASYLLFEAEFTRELIALGRADALRQRETLAAWIASASPGGGPPAAAQGPPAAA GTWGAAAAPVCPSAGSPGERGGRR
Sequences:
>Translated_424_residues MRLALVLMGGGARAAYQAGVLQALAEIAHQVQPARRELPFAIVCGSSAGAINAAAIASHADDFARGAARLLSFWEHLRAE MIYRTDWLGVAGAGARWLAAMSIGWAARRAPRGLLDNAPLADLLRRELDFHRIGRMLGARRLHALSVTALSYTSGRHLTF YAGSEPIHAWRRAQRTARMVDLSAAHLLASSAIPFVFPAVPLVIDGRIEYFGDGSIRQIAPLSPAIHFGGDRIVVIGAAA ARPEVPAANGHALGYPSLAQIGQQVLASVFLDSIGTDIERIEHVNRVVEHLPRQIEPESGWRHVDVLAIAPSERIELIAA KHLRRLPLTVRGLLGAIGGNQPAGASFASYLLFEAEFTRELIALGRADALRQRETLAAWIASASPGGGPPAAAQGPPAAA GTWGAAAAPVCPSAGSPGERGGRR >Mature_424_residues MRLALVLMGGGARAAYQAGVLQALAEIAHQVQPARRELPFAIVCGSSAGAINAAAIASHADDFARGAARLLSFWEHLRAE MIYRTDWLGVAGAGARWLAAMSIGWAARRAPRGLLDNAPLADLLRRELDFHRIGRMLGARRLHALSVTALSYTSGRHLTF YAGSEPIHAWRRAQRTARMVDLSAAHLLASSAIPFVFPAVPLVIDGRIEYFGDGSIRQIAPLSPAIHFGGDRIVVIGAAA ARPEVPAANGHALGYPSLAQIGQQVLASVFLDSIGTDIERIEHVNRVVEHLPRQIEPESGWRHVDVLAIAPSERIELIAA KHLRRLPLTVRGLLGAIGGNQPAGASFASYLLFEAEFTRELIALGRADALRQRETLAAWIASASPGGGPPAAAQGPPAAA GTWGAAAAPVCPSAGSPGERGGRR
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44847; Mature: 44847
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLALVLMGGGARAAYQAGVLQALAEIAHQVQPARRELPFAIVCGSSAGAINAAAIASHA CEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCCHHHHHHHHH DDFARGAARLLSFWEHLRAEMIYRTDWLGVAGAGARWLAAMSIGWAARRAPRGLLDNAPL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH ADLLRRELDFHRIGRMLGARRLHALSVTALSYTSGRHLTFYAGSEPIHAWRRAQRTARMV HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHH DLSAAHLLASSAIPFVFPAVPLVIDGRIEYFGDGSIRQIAPLSPAIHFGGDRIVVIGAAA HHHHHHHHHHCCCCHHHCCCCEEECCCEEEECCCCCCEECCCCCCEEECCCEEEEEEECC ARPEVPAANGHALGYPSLAQIGQQVLASVFLDSIGTDIERIEHVNRVVEHLPRQIEPESG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC WRHVDVLAIAPSERIELIAAKHLRRLPLTVRGLLGAIGGNQPAGASFASYLLFEAEFTRE CCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LIALGRADALRQRETLAAWIASASPGGGPPAAAQGPPAAAGTWGAAAAPVCPSAGSPGER HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGRR CCCC >Mature Secondary Structure MRLALVLMGGGARAAYQAGVLQALAEIAHQVQPARRELPFAIVCGSSAGAINAAAIASHA CEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCCHHHHHHHHH DDFARGAARLLSFWEHLRAEMIYRTDWLGVAGAGARWLAAMSIGWAARRAPRGLLDNAPL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH ADLLRRELDFHRIGRMLGARRLHALSVTALSYTSGRHLTFYAGSEPIHAWRRAQRTARMV HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHH DLSAAHLLASSAIPFVFPAVPLVIDGRIEYFGDGSIRQIAPLSPAIHFGGDRIVVIGAAA HHHHHHHHHHCCCCHHHCCCCEEECCCEEEECCCCCCEECCCCCCEEECCCEEEEEEECC ARPEVPAANGHALGYPSLAQIGQQVLASVFLDSIGTDIERIEHVNRVVEHLPRQIEPESG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC WRHVDVLAIAPSERIELIAAKHLRRLPLTVRGLLGAIGGNQPAGASFASYLLFEAEFTRE CCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LIALGRADALRQRETLAAWIASASPGGGPPAAAQGPPAAAGTWGAAAAPVCPSAGSPGER HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGRR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA