| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is paaF [C]
Identifier: 238028759
GI number: 238028759
Start: 3659672
End: 3660502
Strand: Reverse
Name: paaF [C]
Synonym: bglu_1g32230
Alternate gene names: 238028759
Gene position: 3660502-3659672 (Counterclockwise)
Preceding gene: 238028760
Following gene: 238028758
Centisome position: 93.7
GC content: 72.44
Gene sequence:
>831_bases ATGAGCCAACCCGATGCCTACGCCGGCTACCAGGCGCTGCGGCTGCGGCGCCTGCCGCACGGCATCCTCGAGATCGTGAT GAGCGGCGAGGGCGCCAACCGCAGCGGCCTCGCCACCGCCGACGCGCGCATGCACCGCGAGCTCGCCGAAATCTGGCGCG ACCTCGACCGCGATCCCGAGGTGCGCGTCGCGCTGATCCGCGGCGAGGGCAAGGGCTTCTCGGCGGGCGGCGATCTCGCT CTCGTCGAGCAGATGGCCGACGATTTCGCGGTGCGCACGCGCGTCTGGCACGAGGCGCGCGACCTCGTCTACAACGTGAT CAACTGCGGCAAGCCGATCGTCTCGGCGATGCACGGGCCGGCGGTGGGCGCGGGGCTGGTGGCCGGGCTGCTGGCCGACG TGTCGATCGCCGCGAACGACGCGCGCATCATCGACGGCCATACGCGGCTCGGGGTGGCGGCCGGCGACCACGCCGCGATC GTCTGGCCGCTGTTGTGCGGCATGGCGAAGGCCAAGTATCACCTGCTGCTCTGCGAGCCGGTGAGCGGGGCGCAGGCCGA GCGCATCGGGCTCGTGTCGCTGGCCGTCGACGCGGCCGAGCTGCTGCCGAAGGCGCTGGAGCTGGCCGAGCGGCTCGCGC ACGGTTCGCAGAGCGCGATTCGCTGGACCAAGTACGCGCTCAACAACTGGCTGCGCATGGCCGGGCCGACCTTCGACGCG TCGCTCGCGCTCGAATTCATGGGCTTCTCGGGTCCGGACGTGCGCGAGGGCATCGACTCGCTGCGCGCGCGGCGCGCGCC CGACTTCGACGGCGCGGCCGGCAAGCCGTGA
Upstream 100 bases:
>100_bases AGCAAGCCGTCGCGCCGCTCGAGGCGGCGTCCTGAACACGCGCGGCGCCGCTGCCGAGGCACCCGCACGACACCATCATG ACCCTGACAGGGAGCGAGAC
Downstream 100 bases:
>100_bases GGGCGCGGCCGCGGGGCGCGGAGGCTGCCGGCCGCCGCGCCGCTCGCCGGCATCCCGCGCCCGCTATCCGCCGCCCATGC GCCCTCGGCCGCATCGCCGG
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSQPDAYAGYQALRLRRLPHGILEIVMSGEGANRSGLATADARMHRELAEIWRDLDRDPEVRVALIRGEGKGFSAGGDLA LVEQMADDFAVRTRVWHEARDLVYNVINCGKPIVSAMHGPAVGAGLVAGLLADVSIAANDARIIDGHTRLGVAAGDHAAI VWPLLCGMAKAKYHLLLCEPVSGAQAERIGLVSLAVDAAELLPKALELAERLAHGSQSAIRWTKYALNNWLRMAGPTFDA SLALEFMGFSGPDVREGIDSLRARRAPDFDGAAGKP
Sequences:
>Translated_276_residues MSQPDAYAGYQALRLRRLPHGILEIVMSGEGANRSGLATADARMHRELAEIWRDLDRDPEVRVALIRGEGKGFSAGGDLA LVEQMADDFAVRTRVWHEARDLVYNVINCGKPIVSAMHGPAVGAGLVAGLLADVSIAANDARIIDGHTRLGVAAGDHAAI VWPLLCGMAKAKYHLLLCEPVSGAQAERIGLVSLAVDAAELLPKALELAERLAHGSQSAIRWTKYALNNWLRMAGPTFDA SLALEFMGFSGPDVREGIDSLRARRAPDFDGAAGKP >Mature_275_residues SQPDAYAGYQALRLRRLPHGILEIVMSGEGANRSGLATADARMHRELAEIWRDLDRDPEVRVALIRGEGKGFSAGGDLAL VEQMADDFAVRTRVWHEARDLVYNVINCGKPIVSAMHGPAVGAGLVAGLLADVSIAANDARIIDGHTRLGVAAGDHAAIV WPLLCGMAKAKYHLLLCEPVSGAQAERIGLVSLAVDAAELLPKALELAERLAHGSQSAIRWTKYALNNWLRMAGPTFDAS LALEFMGFSGPDVREGIDSLRARRAPDFDGAAGKP
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Escherichia coli, GI1787659, Length=224, Percent_Identity=32.1428571428571, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787660, Length=243, Percent_Identity=30.8641975308642, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI221142681, Length=208, Percent_Identity=30.7692307692308, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1788597, Length=275, Percent_Identity=24, Blast_Score=71, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17534483, Length=232, Percent_Identity=28.448275862069, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17540714, Length=183, Percent_Identity=27.8688524590164, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI25145438, Length=236, Percent_Identity=25.4237288135593, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17554946, Length=238, Percent_Identity=24.7899159663866, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24654903, Length=157, Percent_Identity=27.3885350318471, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24653139, Length=251, Percent_Identity=26.2948207171315, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI20129971, Length=234, Percent_Identity=24.3589743589744, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24653477, Length=234, Percent_Identity=24.3589743589744, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 29518; Mature: 29387
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPDAYAGYQALRLRRLPHGILEIVMSGEGANRSGLATADARMHRELAEIWRDLDRDPE CCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC VRVALIRGEGKGFSAGGDLALVEQMADDFAVRTRVWHEARDLVYNVINCGKPIVSAMHGP EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC AVGAGLVAGLLADVSIAANDARIIDGHTRLGVAAGDHAAIVWPLLCGMAKAKYHLLLCEP HHHHHHHHHHHHHHHEECCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEECC VSGAQAERIGLVSLAVDAAELLPKALELAERLAHGSQSAIRWTKYALNNWLRMAGPTFDA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCH SLALEFMGFSGPDVREGIDSLRARRAPDFDGAAGKP HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SQPDAYAGYQALRLRRLPHGILEIVMSGEGANRSGLATADARMHRELAEIWRDLDRDPE CCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC VRVALIRGEGKGFSAGGDLALVEQMADDFAVRTRVWHEARDLVYNVINCGKPIVSAMHGP EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC AVGAGLVAGLLADVSIAANDARIIDGHTRLGVAAGDHAAIVWPLLCGMAKAKYHLLLCEP HHHHHHHHHHHHHHHEECCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEECC VSGAQAERIGLVSLAVDAAELLPKALELAERLAHGSQSAIRWTKYALNNWLRMAGPTFDA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCH SLALEFMGFSGPDVREGIDSLRARRAPDFDGAAGKP HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA