| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is coaX [H]
Identifier: 238028754
GI number: 238028754
Start: 3653685
End: 3654518
Strand: Direct
Name: coaX [H]
Synonym: bglu_1g32180
Alternate gene names: 238028754
Gene position: 3653685-3654518 (Clockwise)
Preceding gene: 238028753
Following gene: 238028761
Centisome position: 93.53
GC content: 76.14
Gene sequence:
>834_bases ATGACGGCGGCACCTCTCGCGCTGCTGGTGGACGCGGGCAACAGCCGGATCAAGTGGGCGCTCGCCGGTGCCGACGGCAC GCTCGTCGAGAGCACGGCGGCCGGCAGCGGCGCGGTGGAGCCGGCGCCCGGCCATGCGCCGGCCGGCAGCGAGGCGGCGA TTCCCGCCTGGCCCGGCCGGGCCGCGCCGCATCATGCCTGGATCTCGAACGTGGCGGGCGCCGAGGTCGGCTCGCGCATC GACGCGCTGATCGACGCGCGCTGGCCGGGGCTGCCGCGCACGCTGGTGACGGCCCGCGCCGAACAGTGCGGCGTGAGCAA CGGCTACACCACGCCCGCGCAGCTCGGCAGCGATCGCTGGTGCGGGCTGATCGGCGCGCGCGCCGCGTATCCGGGCGAGG CGCTGCTGATCGCGACGTTCGGCACGGCCACCACGCTCGAATCGCTGAGCGCCGACGGCCGCTTCGCCGGCGGCCTGATC GCGCCGGGCTGGGCCATGATGATGCGCGCGCTCGGCACGCACACGGCGCAACTGCCGACGCTCACCACCGGCACGGCGAT GCGGCTCGTCGGCGAGCTCGACGACGCGTCGGGCCGCGTGCCGTTCGCGCTCGACACGGCCCATTCGCTGTCGGCCGGCT GCCTGCAAGCGCAGGTGGGGCTGATCGAGCGCGCCTGGCGCGACCTGACGGCGGGCGGCCGCGCGGTACGGCTGCTGCTG TCGGGCGGCGCCGCCGACGCCGTGGCGCACGCCTTGACGGTGCCCCATACGCGGCATGATTCGCTGGTGCTGTCGGGGCT GGCGCGGATCGCGCGCGACGGCGCCGGCCAATGA
Upstream 100 bases:
>100_bases CCGGCATCGACGACAGCGGCCAGCTGCTGCTCGACACGGCCGACGGCCGGCGCGCGATCGCGGCCGGCGACGTCTCGCTG CGCGAAACCGGATCCGCGCC
Downstream 100 bases:
>100_bases GGTCACAATCGGGGCCATGCCGGCACACCGCCGGCCGGCCGGACTGATTATCGAGGGAGAGCTTCGACGATGATGCTACG TTGGTTGATCGCGATCTTGC
Product: pantothenate kinase
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase [H]
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MTAAPLALLVDAGNSRIKWALAGADGTLVESTAAGSGAVEPAPGHAPAGSEAAIPAWPGRAAPHHAWISNVAGAEVGSRI DALIDARWPGLPRTLVTARAEQCGVSNGYTTPAQLGSDRWCGLIGARAAYPGEALLIATFGTATTLESLSADGRFAGGLI APGWAMMMRALGTHTAQLPTLTTGTAMRLVGELDDASGRVPFALDTAHSLSAGCLQAQVGLIERAWRDLTAGGRAVRLLL SGGAADAVAHALTVPHTRHDSLVLSGLARIARDGAGQ
Sequences:
>Translated_277_residues MTAAPLALLVDAGNSRIKWALAGADGTLVESTAAGSGAVEPAPGHAPAGSEAAIPAWPGRAAPHHAWISNVAGAEVGSRI DALIDARWPGLPRTLVTARAEQCGVSNGYTTPAQLGSDRWCGLIGARAAYPGEALLIATFGTATTLESLSADGRFAGGLI APGWAMMMRALGTHTAQLPTLTTGTAMRLVGELDDASGRVPFALDTAHSLSAGCLQAQVGLIERAWRDLTAGGRAVRLLL SGGAADAVAHALTVPHTRHDSLVLSGLARIARDGAGQ >Mature_276_residues TAAPLALLVDAGNSRIKWALAGADGTLVESTAAGSGAVEPAPGHAPAGSEAAIPAWPGRAAPHHAWISNVAGAEVGSRID ALIDARWPGLPRTLVTARAEQCGVSNGYTTPAQLGSDRWCGLIGARAAYPGEALLIATFGTATTLESLSADGRFAGGLIA PGWAMMMRALGTHTAQLPTLTTGTAMRLVGELDDASGRVPFALDTAHSLSAGCLQAQVGLIERAWRDLTAGGRAVRLLLS GGAADAVAHALTVPHTRHDSLVLSGLARIARDGAGQ
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis [H]
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004619 [H]
Pfam domain/function: PF03309 Bvg_acc_factor [H]
EC number: =2.7.1.33 [H]
Molecular weight: Translated: 28037; Mature: 27906
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAPLALLVDAGNSRIKWALAGADGTLVESTAAGSGAVEPAPGHAPAGSEAAIPAWPGR CCCCCEEEEEECCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAPHHAWISNVAGAEVGSRIDALIDARWPGLPRTLVTARAEQCGVSNGYTTPAQLGSDRW CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCC CGLIGARAAYPGEALLIATFGTATTLESLSADGRFAGGLIAPGWAMMMRALGTHTAQLPT HHHHCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCEECCCHHHHHHHHCCCCCCCCC LTTGTAMRLVGELDDASGRVPFALDTAHSLSAGCLQAQVGLIERAWRDLTAGGRAVRLLL CCCCHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE SGGAADAVAHALTVPHTRHDSLVLSGLARIARDGAGQ CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TAAPLALLVDAGNSRIKWALAGADGTLVESTAAGSGAVEPAPGHAPAGSEAAIPAWPGR CCCCEEEEEECCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAPHHAWISNVAGAEVGSRIDALIDARWPGLPRTLVTARAEQCGVSNGYTTPAQLGSDRW CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCC CGLIGARAAYPGEALLIATFGTATTLESLSADGRFAGGLIAPGWAMMMRALGTHTAQLPT HHHHCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCEECCCHHHHHHHHCCCCCCCCC LTTGTAMRLVGELDDASGRVPFALDTAHSLSAGCLQAQVGLIERAWRDLTAGGRAVRLLL CCCCHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE SGGAADAVAHALTVPHTRHDSLVLSGLARIARDGAGQ CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA