Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is kdgR [C]

Identifier: 238028761

GI number: 238028761

Start: 3661682

End: 3662551

Strand: Direct

Name: kdgR [C]

Synonym: bglu_1g32250

Alternate gene names: 238028761

Gene position: 3661682-3662551 (Clockwise)

Preceding gene: 238028754

Following gene: 238028762

Centisome position: 93.73

GC content: 72.53

Gene sequence:

>870_bases
TTGCCGCTCCCTTTCGCATCGCACGCCTGCCCGCCCATGTCCGACACCGAACCCGACGAGCCCGCCGACGACGGCGCCGA
GGAAAAAGTGCGCTCCGGCATCCAGTCGATCGAGGTCGGCTTCCGGCTGCTCGACGTGCTGACCCAGGAGCCGCGCGCGA
TGATGCTGCGCGACCTCGCGCATCGCGCGCAGATGAGCCCCGCCAAGGCGCACCGTTATCTGGTCAGCTTCCAGCGGCTC
GGCGTGGTCGCGCAGGACCCCGTCTCGGGCCGCTACGAACTCGGCGGCTTCGCGCTGCAGATGGGGCTCGCGCGGCTCGC
GCGGGTGGACGGCGTGAAGCTCGCGCGGCTCGCGCTGAGCACGCTGCGCGACCAGCTCGACCTGACCGTCGGCATCGCCG
TGTGGGGCAACCACGGGCCGACCATCGTCCACTGGATGGAGTCGAGCCACCCGGCCCGCGCGTCGCTGAAGCTCGGCGAC
GTGATGCCCCTGCTCGGCTCCGCCACCGGCCTGCTGTTCGCCGCCTACCTGCCGCGCGGCAAGACCGCCGCGCTGCTCGA
ACGCGAGCTCGCCGACGCGCGCCGCGCGCCGCATCACCACGGCCCGCGCACGCGCGAGGCGCTCGAGGCATGCCTGGCCG
AGGTGCGCGAGCACGGCGCCGCGCGCGTCGAGGGCATGCTGCTGCCCACCATCCACGCGTTCTGCATGCCCGTGTTCGAT
TCGCTCGGCGAGCTCTCGCTCGGCCTCGTCGCGCTCGGCCAGGAGGGCGTGTTCGATATCGCCTGGGGCGGCAAGGTCGA
TCTCGCGCTGCGCGAGTGCGCCGCGACGCTGTCCTATCAGATCGGCTACGACCCGGCGCGCGAAGCCTGA

Upstream 100 bases:

>100_bases
ACGAGGGAGGGAAACTATTCTACGATGGTGAATCCGCGCGGCGAAGCCCGCGCCTCGCCGCCGGGCCGCTTCGCCCGCTC
CAGCGTTCGCCGTCTTTCGC

Downstream 100 bases:

>100_bases
CGCCGCGCCACGTCGCGCGGCGCGAACGATCGCGGCGCGCGGCTGTCCGACTGGTCCGTCCCGCCGCGCCGTATCCGGCC
GAAGCGCGGACCCGAAGCGC

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator IclR Family; Transcriptional Regulator; Regulatory Proteins IclR; Regulatory Protein IclR; Transcriptional Regulator Family Protein; Transcription Regulator Protein; Transcriptional Regulatory Protein; Hmg Transcriptional Repressor; Transcriptional Regulator Family; Regulator; Transcriptional Regulator IclR Family Protein; Monosaccharide Transporter; TRANSCRIPTION REGULATOR PROTEIN IclR Domain; Regulatory Protein; IclR Family Regulatory Protein; IclR Family Transcription Regulator Protein; Transcriptional Regulator Iclr Family; Transcriptional Regulator Protein; IclR-Family Transcriptional Regulator; TRANSCRIPTIONal REGULATOR IclR Family

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MPLPFASHACPPMSDTEPDEPADDGAEEKVRSGIQSIEVGFRLLDVLTQEPRAMMLRDLAHRAQMSPAKAHRYLVSFQRL
GVVAQDPVSGRYELGGFALQMGLARLARVDGVKLARLALSTLRDQLDLTVGIAVWGNHGPTIVHWMESSHPARASLKLGD
VMPLLGSATGLLFAAYLPRGKTAALLERELADARRAPHHHGPRTREALEACLAEVREHGAARVEGMLLPTIHAFCMPVFD
SLGELSLGLVALGQEGVFDIAWGGKVDLALRECAATLSYQIGYDPAREA

Sequences:

>Translated_289_residues
MPLPFASHACPPMSDTEPDEPADDGAEEKVRSGIQSIEVGFRLLDVLTQEPRAMMLRDLAHRAQMSPAKAHRYLVSFQRL
GVVAQDPVSGRYELGGFALQMGLARLARVDGVKLARLALSTLRDQLDLTVGIAVWGNHGPTIVHWMESSHPARASLKLGD
VMPLLGSATGLLFAAYLPRGKTAALLERELADARRAPHHHGPRTREALEACLAEVREHGAARVEGMLLPTIHAFCMPVFD
SLGELSLGLVALGQEGVFDIAWGGKVDLALRECAATLSYQIGYDPAREA
>Mature_288_residues
PLPFASHACPPMSDTEPDEPADDGAEEKVRSGIQSIEVGFRLLDVLTQEPRAMMLRDLAHRAQMSPAKAHRYLVSFQRLG
VVAQDPVSGRYELGGFALQMGLARLARVDGVKLARLALSTLRDQLDLTVGIAVWGNHGPTIVHWMESSHPARASLKLGDV
MPLLGSATGLLFAAYLPRGKTAALLERELADARRAPHHHGPRTREALEACLAEVREHGAARVEGMLLPTIHAFCMPVFDS
LGELSLGLVALGQEGVFDIAWGGKVDLALRECAATLSYQIGYDPAREA

Specific function: Transcriptional Regulator Of The Kdgk Gene For The Kdg Kinase And The Kdgt Gene For The Kdg Permease. [C]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788131, Length=200, Percent_Identity=26, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789999, Length=277, Percent_Identity=25.6317689530686, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786468, Length=194, Percent_Identity=24.7422680412371, Blast_Score=61, Evalue=9e-11,
Organism=Escherichia coli, GI87082359, Length=158, Percent_Identity=26.5822784810127, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31249; Mature: 31118

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPFASHACPPMSDTEPDEPADDGAEEKVRSGIQSIEVGFRLLDVLTQEPRAMMLRDLA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
HRAQMSPAKAHRYLVSFQRLGVVAQDPVSGRYELGGFALQMGLARLARVDGVKLARLALS
HHHHCCHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
TLRDQLDLTVGIAVWGNHGPTIVHWMESSHPARASLKLGDVMPLLGSATGLLFAAYLPRG
HHHHHHCEEEEEEEECCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC
KTAALLERELADARRAPHHHGPRTREALEACLAEVREHGAARVEGMLLPTIHAFCMPVFD
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHH
SLGELSLGLVALGQEGVFDIAWGGKVDLALRECAATLSYQIGYDPAREA
HHHHHHHHHHEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PLPFASHACPPMSDTEPDEPADDGAEEKVRSGIQSIEVGFRLLDVLTQEPRAMMLRDLA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
HRAQMSPAKAHRYLVSFQRLGVVAQDPVSGRYELGGFALQMGLARLARVDGVKLARLALS
HHHHCCHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
TLRDQLDLTVGIAVWGNHGPTIVHWMESSHPARASLKLGDVMPLLGSATGLLFAAYLPRG
HHHHHHCEEEEEEEECCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC
KTAALLERELADARRAPHHHGPRTREALEACLAEVREHGAARVEGMLLPTIHAFCMPVFD
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHH
SLGELSLGLVALGQEGVFDIAWGGKVDLALRECAATLSYQIGYDPAREA
HHHHHHHHHHEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA