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The map label for this gene is birA [H]

Identifier: 238028753

GI number: 238028753

Start: 3652783

End: 3653688

Strand: Direct

Name: birA [H]

Synonym: bglu_1g32170

Alternate gene names: 238028753

Gene position: 3652783-3653688 (Clockwise)

Preceding gene: 238028742

Following gene: 238028754

Centisome position: 93.51

GC content: 76.6

Gene sequence:

>906_bases
ATGAACGTCTCACCGCCCCTGTCCGACGCCGCGCGAATCGATCCGACGCGCGCCCGCTCGCTGCCCGCCAGCGCGCCCGA
GCCCTGGCCGCTCGACATCGTCGAGGCGACCGGCTCGACCAACGCCGACCTCGCCGCCCATCTGAAGACGCTGCCGCGCA
CGCGCAACGCCCTGCCGCGGCCGATCGTGCGCGTCGCCTACGAGCAGACCGCCGGGCGCGGCCGCCAGGGCCGCCCGTGG
TTCGCGCAGCCCGGCAACGCGCTGCTGTGCTCGGTCGGCTGCGTGCTGCCGCGCCCGGTGGACGCGCTCGCCGGCCTGAG
CCTCGCGGTCGGCGTCGCGCTCGCCGAGGGGCTGGCCGCGCTGCCGCTCGCGCGCGGCCAGCGGGTACGGCTCAAATGGC
CGAACGACCTGCTGCTGGTGGACGGCGACCTGCCGGTGGGCAAGCTCGGCGGGATTCTCGTCGAGACGGTCTGGAACACC
GCCGACGCGAGCGCGCTCGTGATCGGCTTCGGCATCAACGTGCGCGGCGCGGAGGCGGTGGCCGCCGAGGTCGCGGCGCT
GCGCGAGCGCAACGCCGCGCTGGCGGGCGCGCTGCCGCCCGCCGCGCTGTCGTCGGCCTGTGCGAGCGCGAACCTCACCG
ATACGCTGGCCGCCGTGCTCGATCCGCTCGCCACCGCGCTCGAACGCTTCGCCACCGGCGGCCTCGCGCCGTTCGCGCCG
CGCTGGGCCGCGCTGCACGCGCACGCGGGCCGCGAGGTGGTACTGCTCGAACAGGGTCGGGAAGTGGCGCGCGGCGTCGC
GGCCGGCATCGACGACAGCGGCCAGCTGCTGCTCGACACGGCCGACGGCCGGCGCGCGATCGCGGCCGGCGACGTCTCGC
TGCGCGAAACCGGATCCGCGCCATGA

Upstream 100 bases:

>100_bases
GCGGCGAACCGGGCCGCCGGCCCGGCCACCCCGGCCGGCCGCCCCGAGGCACGCGCAATCGCTCCGGCCCCGCCGCGCCG
GCTCTCGTACAATAGCCGCC

Downstream 100 bases:

>100_bases
CGGCGGCACCTCTCGCGCTGCTGGTGGACGCGGGCAACAGCCGGATCAAGTGGGCGCTCGCCGGTGCCGACGGCACGCTC
GTCGAGAGCACGGCGGCCGG

Product: biotin--protein ligase

Products: NA

Alternate protein names: Biotin operon repressor; Biotin--[acetyl-CoA-carboxylase] synthetase; Biotin--protein ligase [H]

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNVSPPLSDAARIDPTRARSLPASAPEPWPLDIVEATGSTNADLAAHLKTLPRTRNALPRPIVRVAYEQTAGRGRQGRPW
FAQPGNALLCSVGCVLPRPVDALAGLSLAVGVALAEGLAALPLARGQRVRLKWPNDLLLVDGDLPVGKLGGILVETVWNT
ADASALVIGFGINVRGAEAVAAEVAALRERNAALAGALPPAALSSACASANLTDTLAAVLDPLATALERFATGGLAPFAP
RWAALHAHAGREVVLLEQGREVARGVAAGIDDSGQLLLDTADGRRAIAAGDVSLRETGSAP

Sequences:

>Translated_301_residues
MNVSPPLSDAARIDPTRARSLPASAPEPWPLDIVEATGSTNADLAAHLKTLPRTRNALPRPIVRVAYEQTAGRGRQGRPW
FAQPGNALLCSVGCVLPRPVDALAGLSLAVGVALAEGLAALPLARGQRVRLKWPNDLLLVDGDLPVGKLGGILVETVWNT
ADASALVIGFGINVRGAEAVAAEVAALRERNAALAGALPPAALSSACASANLTDTLAAVLDPLATALERFATGGLAPFAP
RWAALHAHAGREVVLLEQGREVARGVAAGIDDSGQLLLDTADGRRAIAAGDVSLRETGSAP
>Mature_301_residues
MNVSPPLSDAARIDPTRARSLPASAPEPWPLDIVEATGSTNADLAAHLKTLPRTRNALPRPIVRVAYEQTAGRGRQGRPW
FAQPGNALLCSVGCVLPRPVDALAGLSLAVGVALAEGLAALPLARGQRVRLKWPNDLLLVDGDLPVGKLGGILVETVWNT
ADASALVIGFGINVRGAEAVAAEVAALRERNAALAGALPPAALSSACASANLTDTLAAVLDPLATALERFATGGLAPFAP
RWAALHAHAGREVVLLEQGREVARGVAAGIDDSGQLLLDTADGRRAIAAGDVSLRETGSAP

Specific function: BirA acts both as a biotin-operon repressor and as the enzyme that synthesizes the corepressor, acetyl-CoA:carbon-dioxide ligase. This protein also activates biotin to form biotinyl-5'- adenylate and transfers the biotin moiety to biotin-accepting protein

COG id: COG0340

COG function: function code H; Biotin-(acetyl-CoA carboxylase) ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the biotin--protein ligase family [H]

Homologues:

Organism=Escherichia coli, GI1790408, Length=233, Percent_Identity=38.1974248927039, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004408
- InterPro:   IPR004409
- InterPro:   IPR003142
- InterPro:   IPR004143
- InterPro:   IPR013196
- InterPro:   IPR008988
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02237 BPL_C; PF03099 BPL_LipA_LipB; PF08279 HTH_11 [H]

EC number: =6.3.4.15 [H]

Molecular weight: Translated: 30855; Mature: 30855

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVSPPLSDAARIDPTRARSLPASAPEPWPLDIVEATGSTNADLAAHLKTLPRTRNALPR
CCCCCCCCCHHCCCCHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCHHHCCCCC
PIVRVAYEQTAGRGRQGRPWFAQPGNALLCSVGCVLPRPVDALAGLSLAVGVALAEGLAA
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
LPLARGQRVRLKWPNDLLLVDGDLPVGKLGGILVETVWNTADASALVIGFGINVRGAEAV
HHCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHH
AAEVAALRERNAALAGALPPAALSSACASANLTDTLAAVLDPLATALERFATGGLAPFAP
HHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RWAALHAHAGREVVLLEQGREVARGVAAGIDDSGQLLLDTADGRRAIAAGDVSLRETGSA
HHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCC
P
C
>Mature Secondary Structure
MNVSPPLSDAARIDPTRARSLPASAPEPWPLDIVEATGSTNADLAAHLKTLPRTRNALPR
CCCCCCCCCHHCCCCHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCHHHCCCCC
PIVRVAYEQTAGRGRQGRPWFAQPGNALLCSVGCVLPRPVDALAGLSLAVGVALAEGLAA
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
LPLARGQRVRLKWPNDLLLVDGDLPVGKLGGILVETVWNTADASALVIGFGINVRGAEAV
HHCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHH
AAEVAALRERNAALAGALPPAALSSACASANLTDTLAAVLDPLATALERFATGGLAPFAP
HHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RWAALHAHAGREVVLLEQGREVARGVAAGIDDSGQLLLDTADGRRAIAAGDVSLRETGSA
HHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3899863; 3536662; 8265357; 9278503; 1311302; 1328157; 1409631; 11353844 [H]