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The map label for this gene is ychA [C]

Identifier: 238028450

GI number: 238028450

Start: 3301637

End: 3302476

Strand: Reverse

Name: ychA [C]

Synonym: bglu_1g29140

Alternate gene names: 238028450

Gene position: 3302476-3301637 (Counterclockwise)

Preceding gene: 238028451

Following gene: 238028444

Centisome position: 84.54

GC content: 67.98

Gene sequence:

>840_bases
ATGACCCGCGTTCTCGATTTCTTCAGCGCCCTCGTCGCCGAGGACGACAGCCTGCCTCTGACCGAGGCCGCGCTCTCGCT
CGCCCAGGACGCCTATCCCGACCTCGACATGCAGGCGGCGCTCGCCGAACTCGACACGCTGGTCGTGCGTTTTCGGCGGC
GCGTGCGGACCGAACTGCCGAAGCGCGAGATGGTGGACGCGCTCAACGATTATTTCTTTCGCGAGCTCGGCTTCGCCTGC
AACCACAACGACTATTACGATCCCGACAACAGCTATCTGAACATGGTGCTCAAGCGCCGCCGCGGCATCCCGATCTCGCT
CGCGGTGCTGTACCTGGAGCTGGCCGGCCAGCTCGGGCTGGCGGTGCGCGGCGTGTCGTTCCCCGGCCACTTCCTGCTGC
GCGCGACGCTGGCCGACGGCGACGCGATGATCGACCCGACCACCGGGCGCTCGCTGTCGGAGACCGATCTGGTCGACATG
CTGGAGCCGTATGTCGCGCATCCCGAGGAAACCATGTCGAGCACGCTGCGCGCGCTGCTGCAACCGGCCACCGGCCGCGA
GGTGCTCGCGCGCATGCTCAACAACCTGAAGTCGATCTACCTGCAGACCGAGCGCTGGCAACGGCTGCTGGCCGTGCAGC
AGCGGCTCGTGATCCTGCTGCCGGGGCAGCCCGACGAGGTGCGCGACCGAGGCTTCGCCTATGCGCGGCTCGACTACCTG
CGCCCGGCGCTCGAGGATCTCGAGTCGTATCTCGACGAATGCCCCGAGGCGGTCGACGCGACCATCGTGGAGGCGCAACT
GACCGAGCTGCGGCAGCGCATGCGGCGCGGCGGCGACTGA

Upstream 100 bases:

>100_bases
CCGCCAGCCTGGTCCTGTTCGCCGCACTATATTTCGGTATGTTGTGGTTGATGGGATTCAAATACGCGTATTTCCGCCGC
CGCGCCAAATGACGAGCACC

Downstream 100 bases:

>100_bases
CGCCCCGGCCGCCTTCCGCAGTCCCGTACGACGACGCCCGCCCGCTGCGCCGCCCACGCCGCGGGCGGCGCGGCGCGCGG
CTCGCTAGGCCGCGCCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTRVLDFFSALVAEDDSLPLTEAALSLAQDAYPDLDMQAALAELDTLVVRFRRRVRTELPKREMVDALNDYFFRELGFAC
NHNDYYDPDNSYLNMVLKRRRGIPISLAVLYLELAGQLGLAVRGVSFPGHFLLRATLADGDAMIDPTTGRSLSETDLVDM
LEPYVAHPEETMSSTLRALLQPATGREVLARMLNNLKSIYLQTERWQRLLAVQQRLVILLPGQPDEVRDRGFAYARLDYL
RPALEDLESYLDECPEAVDATIVEAQLTELRQRMRRGGD

Sequences:

>Translated_279_residues
MTRVLDFFSALVAEDDSLPLTEAALSLAQDAYPDLDMQAALAELDTLVVRFRRRVRTELPKREMVDALNDYFFRELGFAC
NHNDYYDPDNSYLNMVLKRRRGIPISLAVLYLELAGQLGLAVRGVSFPGHFLLRATLADGDAMIDPTTGRSLSETDLVDM
LEPYVAHPEETMSSTLRALLQPATGREVLARMLNNLKSIYLQTERWQRLLAVQQRLVILLPGQPDEVRDRGFAYARLDYL
RPALEDLESYLDECPEAVDATIVEAQLTELRQRMRRGGD
>Mature_278_residues
TRVLDFFSALVAEDDSLPLTEAALSLAQDAYPDLDMQAALAELDTLVVRFRRRVRTELPKREMVDALNDYFFRELGFACN
HNDYYDPDNSYLNMVLKRRRGIPISLAVLYLELAGQLGLAVRGVSFPGHFLLRATLADGDAMIDPTTGRSLSETDLVDML
EPYVAHPEETMSSTLRALLQPATGREVLARMLNNLKSIYLQTERWQRLLAVQQRLVILLPGQPDEVRDRGFAYARLDYLR
PALEDLESYLDECPEAVDATIVEAQLTELRQRMRRGGD

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI16306500, Length=229, Percent_Identity=28.3842794759825, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI16306502, Length=229, Percent_Identity=28.3842794759825, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI1787465, Length=261, Percent_Identity=29.1187739463602, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31654; Mature: 31522

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVLDFFSALVAEDDSLPLTEAALSLAQDAYPDLDMQAALAELDTLVVRFRRRVRTELP
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
KREMVDALNDYFFRELGFACNHNDYYDPDNSYLNMVLKRRRGIPISLAVLYLELAGQLGL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AVRGVSFPGHFLLRATLADGDAMIDPTTGRSLSETDLVDMLEPYVAHPEETMSSTLRALL
HEECCCCCCHHHHEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
QPATGREVLARMLNNLKSIYLQTERWQRLLAVQQRLVILLPGQPDEVRDRGFAYARLDYL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHCCCHHHHHHHH
RPALEDLESYLDECPEAVDATIVEAQLTELRQRMRRGGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRVLDFFSALVAEDDSLPLTEAALSLAQDAYPDLDMQAALAELDTLVVRFRRRVRTELP
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
KREMVDALNDYFFRELGFACNHNDYYDPDNSYLNMVLKRRRGIPISLAVLYLELAGQLGL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AVRGVSFPGHFLLRATLADGDAMIDPTTGRSLSETDLVDMLEPYVAHPEETMSSTLRALL
HEECCCCCCHHHHEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
QPATGREVLARMLNNLKSIYLQTERWQRLLAVQQRLVILLPGQPDEVRDRGFAYARLDYL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHCCCHHHHHHHH
RPALEDLESYLDECPEAVDATIVEAQLTELRQRMRRGGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]