| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is mviN [H]
Identifier: 238028451
GI number: 238028451
Start: 3302485
End: 3304035
Strand: Reverse
Name: mviN [H]
Synonym: bglu_1g29150
Alternate gene names: 238028451
Gene position: 3304035-3302485 (Counterclockwise)
Preceding gene: 238028453
Following gene: 238028450
Centisome position: 84.58
GC content: 66.8
Gene sequence:
>1551_bases ATGAATCTATTCCGAGCCCTGCTGACGGTCAGCGGCTTCACGCTGTTGTCACGCGTGACCGGCCTGGCCCGCGAAACGCT GATCGCCCGTGCGTTCGGCGCCAGTCAATACACCGACGCGTTCTACGTCGCCTTCCGGATTCCGAACCTGCTGCGCCGGC TGTCGGCCGAGGGCGCGTTTTCGCAGGCGTTCGTGCCGATCCTGGCCGAGTTCAAGAACCAGCAGGGCCACGACGCCACC AAGGCGCTCGTCGACGCGATGTCGACCGTGCTCGCCTGGGCGCTCGCGCTGCTCTCGCTGGCGGGCATGGCGGGTGCGTC GTGGGTGGTCTACGCGGTGGCTTCGGGCCTGAGCAACGACGGCCATGCCTATCCGCTCGCGGTCACGATGACGCGGATCA TGTTCCCTTACATCATCTTCATCTCGCTGACCACGCTCGCCTCGGGCGTGCTGAACACCTACAAGAACTTCTCGCTGCCG GCGTTCGCGCCGGTGCTGCTGAACGTGGCGTTCATCGTGGCCGCGGCGTTCGTCGCGCCGCACCTGACAATGCCGGTCTT CGCGCTGGCCTGGGCCGTGATCGTCGGCGGGCTGCTGCAATTCGCGGTGCAGTGGCCGGGGCTCAAGCGCATCGACATGA TGCCGCGCATCGGGCTCGATCCGCTGCGCGCGCTCGCCCATCCGGGCGTCAAGCGCGTGCTCGCGAAGATGGTGCCGGCC ACCTTCGCCGTCTCGGTCGCGCAGCTCTCGCTGATCATCAATACCAACATCGCGTCGCGGCTCGGGCAGGGCGCCGTGTC ATGGATCAACTATGCCGACCGGCTAATGGAGTTCCCCACCGCGCTGCTCGGCGTCGCGCTCGGCACGATCCTGCTGCCGA GCCTGTCGAAGGCGCACGTCGACGCGGATTCGGCCGAGTATTCGGCACTGCTCGACTGGGGCCTGCGCGTGACCTTCCTG CTCGCGGTGCCGAGCGCGCTCGGGCTGCTGCTGTTCGCCACGCCGCTCACGGCCACGCTGTTCAACTACGGCAAGTTCGA CGCGCACACGGTGCAGATGGTCGCGCGCGCGCTGGCCGCCTACGGTGTCGGTCTGATCGGCATCATCCTGATCAAGATCC TCGCGCCGGGCTTCTACGCGAAGCAGGACATCAAGACGCCGGTGAAGATCGCCATCGGCGTGCTGATCGTCACCCAGCTG TCGAACTATCTGTTCGTGCCGATGCTCGGCACCGCGGGCCTCACGCTCAGCATCGGCGTGGGCGCGTCGCTGAATTCGCT GCTGCTGTTCCTGGGGCTGCGCCGCCGCGGCATCTACCGGCCGTCGCCGGGCTGGCCGCGCTTTCTCGCCCAGCTCACCG GCGCCTCGCTGGTGCTGGCCGGCACGATCCACTGGTTCGCGATCAATTTCGACTGGATCGGGCTGCGCGCGCAGCCGCTC GCGCGCATCGCGCTGACGGCCGCCAGCCTGGTCCTGTTCGCCGCACTATATTTCGGTATGTTGTGGTTGATGGGATTCAA ATACGCGTATTTCCGCCGCCGCGCCAAATGA
Upstream 100 bases:
>100_bases GGCGATATCGATCCGTATGGCGACAGCCGGGCGGCGCGTGCGGCGCCTTTTTCCGCCGAAGGGGCGGACCGCGACGGGGC TTCCGTATAATAGGCGCCCC
Downstream 100 bases:
>100_bases CGAGCACCATGACCCGCGTTCTCGATTTCTTCAGCGCCCTCGTCGCCGAGGACGACAGCCTGCCTCTGACCGAGGCCGCG CTCTCGCTCGCCCAGGACGC
Product: Integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQYTDAFYVAFRIPNLLRRLSAEGAFSQAFVPILAEFKNQQGHDAT KALVDAMSTVLAWALALLSLAGMAGASWVVYAVASGLSNDGHAYPLAVTMTRIMFPYIIFISLTTLASGVLNTYKNFSLP AFAPVLLNVAFIVAAAFVAPHLTMPVFALAWAVIVGGLLQFAVQWPGLKRIDMMPRIGLDPLRALAHPGVKRVLAKMVPA TFAVSVAQLSLIINTNIASRLGQGAVSWINYADRLMEFPTALLGVALGTILLPSLSKAHVDADSAEYSALLDWGLRVTFL LAVPSALGLLLFATPLTATLFNYGKFDAHTVQMVARALAAYGVGLIGIILIKILAPGFYAKQDIKTPVKIAIGVLIVTQL SNYLFVPMLGTAGLTLSIGVGASLNSLLLFLGLRRRGIYRPSPGWPRFLAQLTGASLVLAGTIHWFAINFDWIGLRAQPL ARIALTAASLVLFAALYFGMLWLMGFKYAYFRRRAK
Sequences:
>Translated_516_residues MNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQYTDAFYVAFRIPNLLRRLSAEGAFSQAFVPILAEFKNQQGHDAT KALVDAMSTVLAWALALLSLAGMAGASWVVYAVASGLSNDGHAYPLAVTMTRIMFPYIIFISLTTLASGVLNTYKNFSLP AFAPVLLNVAFIVAAAFVAPHLTMPVFALAWAVIVGGLLQFAVQWPGLKRIDMMPRIGLDPLRALAHPGVKRVLAKMVPA TFAVSVAQLSLIINTNIASRLGQGAVSWINYADRLMEFPTALLGVALGTILLPSLSKAHVDADSAEYSALLDWGLRVTFL LAVPSALGLLLFATPLTATLFNYGKFDAHTVQMVARALAAYGVGLIGIILIKILAPGFYAKQDIKTPVKIAIGVLIVTQL SNYLFVPMLGTAGLTLSIGVGASLNSLLLFLGLRRRGIYRPSPGWPRFLAQLTGASLVLAGTIHWFAINFDWIGLRAQPL ARIALTAASLVLFAALYFGMLWLMGFKYAYFRRRAK >Mature_516_residues MNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQYTDAFYVAFRIPNLLRRLSAEGAFSQAFVPILAEFKNQQGHDAT KALVDAMSTVLAWALALLSLAGMAGASWVVYAVASGLSNDGHAYPLAVTMTRIMFPYIIFISLTTLASGVLNTYKNFSLP AFAPVLLNVAFIVAAAFVAPHLTMPVFALAWAVIVGGLLQFAVQWPGLKRIDMMPRIGLDPLRALAHPGVKRVLAKMVPA TFAVSVAQLSLIINTNIASRLGQGAVSWINYADRLMEFPTALLGVALGTILLPSLSKAHVDADSAEYSALLDWGLRVTFL LAVPSALGLLLFATPLTATLFNYGKFDAHTVQMVARALAAYGVGLIGIILIKILAPGFYAKQDIKTPVKIAIGVLIVTQL SNYLFVPMLGTAGLTLSIGVGASLNSLLLFLGLRRRGIYRPSPGWPRFLAQLTGASLVLAGTIHWFAINFDWIGLRAQPL ARIALTAASLVLFAALYFGMLWLMGFKYAYFRRRAK
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=520, Percent_Identity=52.5, Blast_Score=483, Evalue=1e-138,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 55582; Mature: 55582
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: PS00962 RIBOSOMAL_S2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQYTDAFYVAFRIPNLLRRLSAEGAF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCH SQAFVPILAEFKNQQGHDATKALVDAMSTVLAWALALLSLAGMAGASWVVYAVASGLSND HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC GHAYPLAVTMTRIMFPYIIFISLTTLASGVLNTYKNFSLPAFAPVLLNVAFIVAAAFVAP CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH HLTMPVFALAWAVIVGGLLQFAVQWPGLKRIDMMPRIGLDPLRALAHPGVKRVLAKMVPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHH TFAVSVAQLSLIINTNIASRLGQGAVSWINYADRLMEFPTALLGVALGTILLPSLSKAHV HHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC DADSAEYSALLDWGLRVTFLLAVPSALGLLLFATPLTATLFNYGKFDAHTVQMVARALAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH YGVGLIGIILIKILAPGFYAKQDIKTPVKIAIGVLIVTQLSNYLFVPMLGTAGLTLSIGV HHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCEEEECC GASLNSLLLFLGLRRRGIYRPSPGWPRFLAQLTGASLVLAGTIHWFAINFDWIGLRAQPL CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCCCHH ARIALTAASLVLFAALYFGMLWLMGFKYAYFRRRAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQYTDAFYVAFRIPNLLRRLSAEGAF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCH SQAFVPILAEFKNQQGHDATKALVDAMSTVLAWALALLSLAGMAGASWVVYAVASGLSND HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC GHAYPLAVTMTRIMFPYIIFISLTTLASGVLNTYKNFSLPAFAPVLLNVAFIVAAAFVAP CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH HLTMPVFALAWAVIVGGLLQFAVQWPGLKRIDMMPRIGLDPLRALAHPGVKRVLAKMVPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHH TFAVSVAQLSLIINTNIASRLGQGAVSWINYADRLMEFPTALLGVALGTILLPSLSKAHV HHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC DADSAEYSALLDWGLRVTFLLAVPSALGLLLFATPLTATLFNYGKFDAHTVQMVARALAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH YGVGLIGIILIKILAPGFYAKQDIKTPVKIAIGVLIVTQLSNYLFVPMLGTAGLTLSIGV HHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCEEEECC GASLNSLLLFLGLRRRGIYRPSPGWPRFLAQLTGASLVLAGTIHWFAINFDWIGLRAQPL CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCCCHH ARIALTAASLVLFAALYFGMLWLMGFKYAYFRRRAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]